Dryobates pubescens (Downy woodpecker): 104296902
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Entry
104296902 CDS
T08526
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104296902 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104296902 (USP38)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104296902 (USP38)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104296902 (USP38)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104296902 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
DUF6221
Motif
Other DBs
NCBI-GeneID:
104296902
NCBI-ProteinID:
XP_009895064
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
LRLYVSQVTQVSGLLRSVWKAEPDRLLPSLQELFAVISAADTSFEPSVALASLVQHIPLQ
MITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLAAVQKFTILI
DVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVSLVHSFKRDGL
PSSTAFLMQFTELIHCMMYHYSGFPELYEPILEAVKDMPKPTEEKIKLILSQSAWTSQSS
SLPSCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRHVLSLNLNGCNSLMRK
LQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEERTLKALS
SAKNSESITNEESQTQEAVHKAQVFAEAPCMGSEERTLIEKMFGGKLKTMICCLNCKSMS
QKEEAFTDLSLAFCPPTSLEDVGPKCMEHSEVKDDYMVQTNTLTTSPAGETPLSNLEVNG
GCDTVMNEGATKDFSTEPNSENTTNSELSKVQDNRDVSQRLIGRNTLSVTDLLNYFLAPE
ILSGDNKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRFSYDPKCHIRRKILDNVSLPLV
LELPVKRATSPLAVVSGGWSAGVEISDIGENLAKKLKPSGADEVTCPQLVPYVLSSVVVH
SGVSSESGHYYSYARNVTGSGPSGLCHQSTALSLVSPQDKFLAEDSPCTIVENDLDAEMP
REWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLFYKKQNSTCGFNTSSANGLWVNGDPP
LQKDLMDAITKDNKLYLQEQELSARTQALQAASASCSFRPNGFDDNDPPGSCGPTGGGGG
GGFSTVGRLVF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcctctacgtctcgcaggtgacgcaggtcagcgggctgctgcggagcgtctggaag
gccgagccagacaggctgctgccctccctgcaggagctcttcgccgtcatctccgctgcc
gatacttcatttgaaccttctgttgcactggcaagtcttgtgcagcacataccattacag
atgattacagtactcatcaggagccttactacagatccaaatgtgaaagatgcgagtatg
actcaagctctgtgcagaatgattgactggttgtcctggcctctggctcagcatgtggaa
acatgggtgattgctctgctcaaaggcttggctgcagtccagaaatttaccatcctcatt
gatgtcactctgcttaagattgaattggtctttaatcgactttggtttcctctagtgagg
cctggtgcccttgctgtcctttcccacatgttacttagttttcagcattctccagaagct
tttcatttgattgtcccacatgtggtcagcttggttcactccttcaaaagagatggctta
ccttccagtacagcctttctgatgcagttcactgagttgatacactgtatgatgtatcat
tattcaggatttccagagctctatgaacccattctggaagctgttaaggatatgcccaaa
cccactgaagagaagattaagttgattctcagtcagagtgcctggacttctcaatccagt
tctttgccatcttgtttatctagactttctgggaaatctgaaactggcaagacaggtcta
attaatctaggaaatacttgctacatgaacagtgttattcaggcactttttatggctaca
gatttcagaaggcatgttttatctctgaatttaaatggatgtaattcactaatgagaaaa
ttacagcatctctttgcatttttggcccatactcagagggaggcatatgctcctagaatt
ttctttgaggcttccagaccaccatggttcacccctcgatcccagcaggattgctcagaa
tatctcagattcctactagacaggctgcatgaagaagagagaaccttgaaagcactgtct
tcagcaaagaattctgaaagtataacaaatgaagagtcccaaacccaggaagctgttcat
aaagcacaagtatttgctgaagcaccttgcatgggaagtgaggaaagaacactgatagag
aagatgtttgggggaaagttaaagactatgatatgctgtttgaactgcaaaagtatgtct
cagaaggaagaagctttcacagatctttctctggctttctgtcctccaacttccttggag
gatgttggcccaaaatgtatggaacactctgaagtgaaagatgactacatggtgcaaact
aatactttaacaaccagtcctgctggagaaacaccactcagtaatttggaagtaaacggc
ggatgtgacacagtcatgaatgaaggagccacgaaagatttttctactgagccaaactct
gagaataccacaaattctgaactcagcaaagttcaagataatagagatgtgtctcagagg
ctaataggtagaaacaccctgtcagttacagacttacttaattattttctggcacctgag
atcctcagtggagacaataagtactattgtgagaagtgtgcctctctacagaacgctgag
aaaactatgcaaatcattgaggaacctgaatacctcattctcactcttctgagattttca
tatgatccaaagtgtcacataaggcgcaaaattttggacaatgtgtctctgccgcttgtt
ttggaactgccagtcaaaagagcaacatcccctctagctgtagtttcaggtggttggtct
gctggtgttgagatttctgatattggagaaaaccttgctaaaaaactgaagccatcaggt
gctgatgaagtgacctgcccacaattggtgccctacgtgttaagctctgtggtggttcat
tctggtgtgtcctctgagagtggacactattattcatatgctagaaatgttactgggtca
gggccttcaggactctgtcaccagtctacagctctttctttagtttctcctcaggataag
tttttggcagaggatagtccttgtactattgtagaaaatgatctggatgctgagatgcca
agagagtggtttctgttcaatgacagcagagtgacatttacctcatttcagtcagtccag
aaaattaccagtagatttccaaaggacactgcttatgttctgttttacaaaaaacaaaac
agcacctgtggattcaacaccagttcagcaaatggactctgggtgaatggagaccctccc
ctacagaaggacctcatggatgccattacgaaagataacaaactgtacttgcaggagcaa
gagcttagtgctcgaacccaagcacttcaagctgcctcagcatcctgctctttccgaccc
aatggatttgatgacaatgaccccccaggaagttgtggaccgacaggtggaggaggaggg
ggtgggttcagtactgttggtagattagtcttttga
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