Dryobates pubescens (Downy woodpecker): 104296975
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Entry
104296975 CDS
T08526
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03015
mRNA surveillance pathway
dpub05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104296975 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104296975 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104296975 (CPSF4)
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104296975 (CPSF4)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104296975 (CPSF4)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104296975 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_12
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_3
zf-C3H1
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
104296975
NCBI-ProteinID:
XP_009895147
LinkDB
All DBs
Position
Unknown
AA seq
190 aa
AA seq
DB search
MCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFL
HIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPM
GTTEQPPLPQPTQTQQKRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCT
KGHLAFLSGQ
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccgttccgacacatcagcggggaaaagacagttgtttgcaaacattggctacga
ggactgtgcaaaaagggtgaccagtgcgagtttctgcatgagtatgacatgaccaagatg
cctgagtgttacttctactctaaatttggggaatgcagtaacaaagaatgtccattcttg
cacattgacccggagtctaagatcaaagactgtccctggtatgacagaggcttctgtaaa
catggtcccctctgcagacaccgacacacccgaagagtcatttgtgtgaattacctggtt
gggttctgtccagaggggcccacctgtaaattcatgcaccctcggtttgaactgccaatg
ggaaccacagagcaaccaccactgcctcaaccgacacaaacacagcaaaagaggacaccc
caagtcatcggagtcatgcagtctcagaataacaacactgggaacagaggaccccggccg
ttggagcaggtcacctgctacaagtgtggtgaaaaaggtcattatgccaacagatgcacc
aaaggacatctggcctttctcagtggacagtga
DBGET
integrated database retrieval system
