Dryobates pubescens (Downy woodpecker): 104296985
Help
Entry
104296985 CDS
T08526
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04010
MAPK signaling pathway
dpub04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104296985 (CACNA1B)
04020 Calcium signaling pathway
104296985 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104296985 (CACNA1B)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104296985 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104296985
NCBI-ProteinID:
XP_009895154
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MEDGEAAEFDFPAPDLDLWSIGPVLAPGLLLTVGLLGVTLTQSCAKTSVCLKSDLKSRQG
GPQAGQRMYKQSMAQRARTMALYNPIPVKQNCFTVNRSLFIFSEDNVIRKYAKRITEWPP
FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF
HKGSYLRNGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSI
MKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKTCFSNETGDAVGDFPCGEEPPARQC
ESGTTCREYWQGPNYGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFI
PLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEE
VMLAEEDKNAEEKSPLDGRAASEGPIQHGTAPAETSSGSSYNMLKRAAIKKSKNDLIHAE
EGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVH
YDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIW
AAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVF
ALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGM
FSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAE
VSPMSAANISIAAKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTL
HIRPDMKTHLDRPLVVEPRSEGRNNVSKLSPGDVQEVEQTKVGSTDGAEAPRKHHRHREK
DKPAEHEKGDGTKEENGEPGPNNKEERHRQHRSRSKEVEGGSKEGKSERSRGQEGGKRHH
RRGSVDEGGEKEHRRHRPHRHSADRQGKEGNGAANGARGERRSRHRGGSRSGNRDGEPSS
KGENGEEPHRRHRLRNRALATYDSVEKENGEKEGEAGEKEHRNHQPKENQCEIEVSGSVS
VPVHTLPTTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGDTTVIPMN
NVEFESKAEEKKDVDDLTKNGPKPILPYSSMFILSPTNP
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggggaggctgctgagtttgattttccagctcctgatctggacctgtggagt
attggccctgtgttggctcctgggctgctcctcaccgttggattgttaggggtgacgctc
acgcagagctgcgccaagacatcggtttgtctaaagtcagacctgaaaagccggcaaggt
ggcccccaggccggccagaggatgtataagcagtcgatggctcagagggccaggactatg
gctctctacaaccccatccctgtcaaacagaactgcttcacagtcaacagatccctcttc
atcttcagtgaagataatgttatacggaaatacgccaagagaataacagaatggcctcca
tttgaatacatgattttagctacaatcatagccaattgtattgtgctggctctggagcag
catttgccggatggagacaagacgcccatgtcagagagactggatgacactgagccctac
tttattggaatattttgttttgaagctggcataaagatcattgctctggggtttgttttt
cacaaaggctcttacctccgcaacggttggaacgtgatggattttgtcgtggtcctcaca
gggattctagcaactgctgggactgactttgacctgcggaccctgcgagccgtccgagtg
ctgcgacccctgaagctcgtgtcaggaatcccaagcttgcaggtggtcctcaagtccatc
atgaaggcgatggtgcccttgctgcagatcgggctgctgctcttcttcgccatcgtcatg
ttcgccatcatcggcctggagttctacatgggcaagttccacaaaacctgcttctccaac
gagacaggtgatgctgtgggagattttccttgtggagaggagcctcctgccaggcagtgt
gagagtgggaccacctgcagggagtactggcaagggcccaactatggcatcaccaacttt
gacaacatcctctttgctgtgctcaccgtcttccagtgcatcaccatggagggctggact
gacatcctctacaacacaaatgatgctgcaggaaatacctggaactggctttacttcatc
cctctcatcatcattggctctttcttcatgctcaacttggtgctgggcgtcttatcaggt
gaatttgccaaggagagggagcgggtggagaaccgccgcgcgttcctgaagctccgcagg
cagcagcaaatcgagcgggagctcaacggctacctggagtggatcttcaaagcagaggag
gtcatgctggcagaggaagacaagaacgcagaagagaagtctcctctggacgggagggcc
gcctcggaagggccgatccagcacggcacggcgccggcagagactagcagcggcagcagc
tacaacatgttgaaaagagctgcaataaagaagagcaaaaatgacctgattcatgctgaa
gaagggtctccttttgcccgtgccagtctgaagagtgggaagaacgagagctcatcctac
ttcaggaggaaagagaagatgtttcgcttcttcatccggcgcatggtgaaagctcagagc
ttctactgggtcgtgctctgcgtggtggccctcaacaccctctgcgtcgccatggtgcac
tacgaccagccagagaagctcaccactgccctctattttgcagagtttgtctttctgggg
ctgttcctcaccgagatgtctctgaagatgtatgggctggggccaaggaattacttccac
tcttcattcaactgctttgactttggggtgattgtgggaagcatctttgaagtcatctgg
gctgcagtgaagccaggaacctcctttggcatcagcgtgctgagagcgctccggctcctg
aggattttcaaagtcacaaagtactggaattccctgaggaatctggtggtctccttactg
aactccatgaagtccatcatcagtttgctcttcctgctgttcctcttcatcgtggtgttt
gctttgctggggatgcagctctttgggggacaattcaatttccaagatgaaacaccaacc
accaacttcgacaccttccctgcggccatcctcacggtgttccagatcctgacgggggag
gactggaacgcggtgatgtaccacggcatcgagtcgcagggtggagtccactcggggatg
ttctcctccatctacttcatcgtcctcaccttgtttggaaactacacactcctgaatgtc
ttcttggctatcgctgttgacaacctggccaatgctcaggagctgaccaaggacgaggag
gagatggaggaagccaccaatcaaaagctcgccctgcagaaggccaaagaagtggcagaa
gtcagccccatgtctgcagccaacatctccatagccgccaagcagcagaactcctccaag
tccaagtcggtgtgggagcagaggaccagccagatccggatgcacaacttccgcgccagc
tgcgaggctctgtacaacgagctggacccggaggagagggttcgctacgctaccaccctg
cacatcaggcccgacatgaagactcacctggaccgcccgctggtggtagagcccaggagc
gaggggaggaacaacgtcagcaagctgagccccggggacgtgcaggaggtggagcagacc
aaagtcggctcgaccgacggggcggaagctccgcggaagcaccaccggcatcgggagaag
gacaagccggcggagcacgagaagggggacggcaccaaggaggagaacggggagcccggc
cccaacaacaaggaggagaggcacaggcagcacaggagccgcagcaaggaggtggaaggg
ggcagtaaggaagggaaaagcgagcgcagcagggggcaggaggggggcaagaggcaccac
cggcgaggctcggtggatgagggaggcgagaaggagcaccgcaggcatcggcctcaccgg
cactccgccgaccggcagggcaaggagggcaacggcgccgccaacggcgcccgcggcgag
cggcgctcccggcaccgcggcggctccaggtctggcaaccgggatggggagcccagctcc
aagggagagaacggggaagagcctcacagacggcacaggctgaggaaccgggcgctggcc
acctacgactcggtggagaaggagaacggcgagaaggaaggggaggctggggagaaggag
caccgcaaccatcagcccaaggagaaccagtgtgagatcgaggtgagtggcagtgtgagt
gtccctgtgcacacccttcccaccacctatctgcagaaggtgccagagcagccagaagat
gctgacaaccagaagaacgtgactcggatgattcagccacctctggacaaaaccaccact
gtcaacatccctgtcaccatcactgccccaccaggggacaccactgtcataccaatgaac
aatgtggagtttgaaagcaaagcggaggagaagaaggacgtcgacgacttgacgaagaac
ggcccgaagccgatcctgccttacagctccatgttcatcctgagccccacaaacccgtga
DBGET
integrated database retrieval system
