Dryobates pubescens (Downy woodpecker): 104297024
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Entry
104297024 CDS
T08526
Symbol
CHM
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dpub01006
]
104297024 (CHM)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104297024 (CHM)
Prenyltransferases [BR:
dpub01006
]
Protein prenylation
Rab geranylgeranyltransferase
104297024 (CHM)
Membrane trafficking [BR:
dpub04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104297024 (CHM)
Endosome - Lysosome transport
Rab GTPases and associated proteins
104297024 (CHM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAE1_2_domI_C
GDI
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
104297024
NCBI-ProteinID:
XP_009895195
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
LPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLAWIKENQEKTDVSEECEEWRK
LILENEEAISLSKKDKTIQHVEDFCFGDQDAAEDVEEAGALSKLPGFGASAAEGLAQASE
KGGPPVESASSEVESQEPEKAADSEPASATEGNDTEVTSENESTPDAALGTTALEPGKAE
TAPADTSAKEPKRIMYSQIVREGRRFNIDLVSKLMFSRGLLIDLLIKSNVSRYAEFQNAT
RILAFREGRVERVPCSRADVFNSKQLTMVEKRMLMKFLTFCLEYEQHPDEYQDYESSTFA
QFLSTRKLTASLQHFILHSIAMVSETECSTLDGLQATKKFLQCLGRYGNTPFLFPMYGQG
EIPQCFCRLCAVFGGIYCLRHSVQCLVVDKESGRCKAIVDHFGQRISANYFIVEDSYLSE
STCTNVCYRQISRAVLITDQSVLNTDSEQQISILSVPPVDPGKPAVCVIELCSSSMTCMK
DTYLVHLTCPSTKTAREDLEPVVQKLFHLNTEKETENEEPGKPRVLWAVYFNMRDSSGVE
KDAYSGLPSNVYVCSGPDSALGNDCAVKQAEAIFREMFPAEDFCPPPPNPEDVIYEENET
APEESEVSISPETEPKSSTEESHSGGSIAVKKEDDEK
NT seq
1916 nt
NT seq
+upstream
nt +downstream
nt
gtttgcctgaatctattattgcagcagcatgtgccagaagtggccagagagttcttcacg
tggattcgagaaattactacggtggaaactgggccagctttagtttttcaggactattgg
cctggattaaagaaaatcaggaaaagactgatgtcagtgaggagtgtgaagagtggagaa
aactgatcctcgagaatgaagaggctatttctcttagcaagaaggataaaactattcaac
atgtagaagatttctgttttggcgatcaggatgcagctgaagatgttgaagaagctggtg
cactgtcaaagctgcctgggtttggagcctctgctgccgaggggcttgctcaggcatcag
aaaaaggtggcccaccagtggagagtgcctcatcagaagtggagagccaggagccagaaa
aggctgcagactccgagccagcaagtgcaacagaagggaatgatacagaagtaacctctg
agaatgagagcactcccgatgcggctttgggcacaactgctctggaaccagggaaagccg
aaactgcacctgcagatacttctgccaaagaaccaaagaggatcatgtattcccagattg
ttagagaaggcagaaggtttaatatcgatttagtttccaagctgatgttctcccgaggtc
tgttaatcgacctgctgatcaagtccaacgtcagcagatacgcggagttccaaaacgcca
cacgaattctggcctttcgagagggaagagtggaacgggtaccttgttctagagcagatg
tcttcaacagcaaacagctcacaatggtggaaaagagaatgctaatgaaatttttgacat
tttgtttggaatatgaacaacatcctgatgaataccaagactatgagagcagcacgtttg
ctcagttcttgagcacacgaaagttaacagccagcttgcagcacttcattcttcactcca
ttgccatggtttcagagactgagtgcagcactcttgatggtcttcaggcaacaaaaaaat
ttcttcagtgccttggccgctatggcaatacaccatttctgtttcctatgtatggccaag
gagagatcccacagtgcttctgcaggctgtgtgctgtctttggaggtatctattgtcttc
gccattctgtgcagtgccttgtagtggacaaagaatctggacgatgcaaagctattgtgg
atcattttggacaaagaataagtgctaactattttattgtggaagatagttacctttcag
agagcacatgcaccaatgtgtgttacaggcagatctccagagcagtgctcattacagatc
agtctgtgctaaacacagattcagagcagcagatttccattttgtcagtgcctcctgtgg
atccaggaaaaccagcagtttgtgtcattgagttgtgttcttcctccatgacgtgcatga
aggacacttatttagtccacttaacctgcccatcaactaaaactgctagggaagatttag
agcctgttgtacagaagttattccatctaaatacagaaaaagagactgaaaatgaagaac
caggaaaacctagagtcctctgggcagtctacttcaacatgagagattcatcaggagttg
agaaagatgcatacagtggcttaccctcaaatgtttatgtctgttctggacctgactctg
ctttaggaaatgactgtgcagtcaaacaggctgaggctattttccgagaaatgttccctg
cagaggacttctgcccaccgccaccaaacccagaagatgttatttatgaagagaatgaaa
ctgctccagaagagtctgaagtcagtatttcaccagagacagaacctaaatcctcaactg
aggaaagccatagtggaggcagtattgctgttaaaaaggaagatgacgaaaagtga
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