Dryobates pubescens (Downy woodpecker): 104297067
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Entry
104297067 CDS
T08526
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104297067 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104297067 (MID1)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104297067 (MID1)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104297067 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
104297067
NCBI-ProteinID:
XP_009895266
UniProt:
A0A093G699
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSVSWVLCRCNNTWVVRHNSKEVPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDISFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaattgcgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccggtggagtctatcactgccttccagtgcccaacctgccgc
tatgtcatcaccctcagtcagcgcggtctagacggactcaagcgcaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctccgtcagcgggcctaattcccccagtgaaacc
cgccgggagcgggcgtttgatagcaacagcatgtcgtcctgtgagaaggttctctgccag
ttctgtgaccaggaccctgcccaggaggcagtgaaaacctgtgttacctgcgaagtgtcc
tactgcgaggagtgcctgaaagccactcaccccaacaagaagcccttcaccggacaccgt
ctcatcgagcccatcccggactctcatatcagaggattaatgtgtttggagcatgaggat
gagaaagttaacatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcgacaccgtgaccatcaggtggcagctttaagtgagcgctatgataagctaaag
caaaatttggaaagtaacctcaccaaccttattaagaggaatactgaactggaaactctt
ttggcaaaactcatccagacctgtcaacatgtagaagtaaatgcatcccgccaagaaacc
aagctgatggaagaatgtgaccagctcattgaaataatccagcaaagacgacaaataatt
ggaaccaaaatcaaggaaggaaaggtggtaaggttgagaaaactggctcagcaaattgca
aactgcaaacagtgcattgagcgctcaacatccctcatctctcaggctgaacagtcactg
aaggagaacgaccatgctcgcttcctgcaaactgctaaaaatatcactgaaagggtttcc
atggcaactgcatcctcccaggtcctaattcctgaaattaatctcaatgatacttttgat
accttcgcacttgattttaccagggagaagaaattgttggaatgccttgattaccttaca
gctcccaacccacctacgattcgagaagagctctgtacagcttcttatgatactattact
gtccactggacatcggatgatgagttcagtgtggtctcatatgagctgcagtacaccatc
ttcactggccaagctaatgttgttagtttatgcaactcagccgacagctggatgattgtt
cccaatatcaaacaaaaccactacacagtgcacggcttgcagagtggcactaagtacatc
ttcattgttaaggccattaatcaggcaggcagccgaagcagcgagcctggcaagctcaag
acaaacagtcagccatttaaactggaccccaagtctgctcacagaaaattgaaagtgtct
catgataatttgacagtggaacgtgatgaaacatcgtccaaaaagagccatacaccagag
agattcacgagccaagggagttacggagtagctggcaacgtgttcattgacagtgggcgg
cactactgggaagtggttataagtggaagtacatggtatgctattggcatttcctacaag
tcggcaccaaagcacgagtggatcgggaagaattctgtctcctgggtgctttgccgctgc
aacaatacatgggtggttcggcacaacagcaaagaggtccccattgagcctgctcctcac
ttgcggcgggttgggattttactggactatgacaacggttcccttgctttttatgatgct
ttgaactccctacacctttacacgtttgacatttcatttgggcagccggtgtgccccaca
ttcactgtgtggaacaagtgtttgaccattataaccggcttgcctatccctgaccaccta
gactcctctgagcagcttgcatga
DBGET
integrated database retrieval system
