Dryobates pubescens (Downy woodpecker): 104297126
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Entry
104297126 CDS
T08526
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104297126 (LRBA)
Membrane trafficking [BR:
dpub04131
]
Endosome - Lysosome transport
Others
Others
104297126 (LRBA)
Endosome - Golgi transport
104297126 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104297126 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
SUKH_6
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
ARM_Cnot1
YbaB_DNA_bd
Motif
Other DBs
NCBI-GeneID:
104297126
NCBI-ProteinID:
XP_009895332
LinkDB
All DBs
Position
Unknown
AA seq
2835 aa
AA seq
DB search
MASEDKQVQPTGDDGGGGAGKEGSAVEGETVRQPLNPGVPIRGIKMKFAVLTGLVEVGDV
SNRDIVDTVFNLLVGGHFDLEMNFIIQEAEGISCMVELLDKCDVTCQAEVWSMFTAILKK
SIRNLQACTEVGLVEQVIKRIDRADNMIADLLVDLLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSESADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPLF
AQLDYRQYSSEHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGHSLEKSSKAHV
TRTVLELCLAFSKYLSNLHTGAPLLKQLCDHVLLNPAIWIHIPAQVQLTLYTYLSTEFVG
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGTDGPRPTQKEILSLRAFLLM
FVKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNG
LQVVYKLLASQSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTSLIT
MTTYNVLFEILTEQICTQVIHKQHPDSDSTVKIQNPQILKVIAILLRNSPQCPETLEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKNSEEQKITEMVYTIFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQGKGGEGSGIHPSTPIRTISG
TKKEAKIKGKQKCLELKDASAPSCIASDMECSTEKKETNTSSDGDQQAPLVCNHREEIEV
EDKETAQDLAAVPGVELSPEAVKPSVSEISTGIAEAIEDSLSKADELVEETMAVSAASLA
TQTALEGETAERLDKSAAEVEEEDDFVDLKEESSMPLPSEEVDKTNKEQSSREMTTQDKP
PEKPPKSVLLKSEGMEGVDGKQEVTSLPEVAIQPDLGGGKKLDEEKMLFSETKTAEGKAN
AHVAEPAVASDKRIAKLDVSNVASDTERLELKASKCLEAPPHPRSIPETSRQQDSSGREL
AAASDGQRRESRSAVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSS
DNVVFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENIEPTQGLSVEASLTFLQ
RLINLVDVLIFASSLGFTEIESEKNMSSGGVLRQCLRLVCAVAVRNCLECQQHAQMKPTG
DTVKNQKAVQGFIGTGKSAAKSPVDIVTGGISPIRDHDRLLQDMDINRLRAVVFRDIEDS
KQAQFLALAVVYFISVLMVSKYRDILEPQNERQAPNHSQAFKEAENGNNETPPADVENPP
AALGTSASTEDSESTAVVQRRDSGLGEEPASGQMNSSSSVAEAGPLSVSAGPDAVSEVLC
TLSLEVKKSQEDRNKTGPEDSKPETSVPAAKNVNVKDILRSLVSTPADGTAVDAAFMPPT
FLGALGDGAAEQPVQFHSFDRSVVVPPKKSSISSSAAAMSIPANAVSVVSSVDSTQTLDL
SGESPGEGSSHSKLPSVPTVSSVPEDSASNMSITDRLEHALEKAAPLLREIFVDFAPFLS
RTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRL
LSQTMKDHLVRVANEAEFILSRQRAEDINRHAEFESLCAQYSADKREEEKMCHHLIMAAK
YRDQVTATQLVQKIVNILTDKHGAWGSSAPSRPREFWRLDYWEDDLRRRRRFVRNPLGST
HPEATLKAAGEHAPDEDILVKGKQSIKSQVLGNQNSESEILLEGDDDIMSFMEEREVESL
TGPVALSTPAQLVAPSGVVKGTLSITLSELYFEVDEEDPSFKKIDPKILAYTEGLHGKWL
FSEIRSIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVVNCLPRVGIGTIFGLPQT
RRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYE
SEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFALTW
LLRIEPFTTLFLNLQGGKFDHADRTFSSVSRAWRNSQRDTSDIKELIPEFYYLPEIFVNS
NNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQG
PEAVRSLNVFYYLTYEGAVNLSSITDPILREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQ
VSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHNLP
AHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCG
FWDKSFRVYSTDSGKLMQVVFGHWDVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGK
TNIIGDNPRGDFATPRAILTGHDYEITCAAICAELGLVISGSKEGPCLIHSMNGDLLRTL
EGPETLAGPQNCLRPKLIQASREGHCVIYYENGLFCVFSVNGRLQATMETNDKIKAIQLS
RDGQYLLTGGDNGVVMVWQMWDLKQLFAYPGCDAGIRSMALSYDQRCIMTGMASGSIVVF
YNDFNRWHHEYQTRY
NT seq
8508 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagacaaacaagtgcagccaacaggtgatgatggaggaggaggagcaggg
aaagaaggaagtgctgttgaaggggaaactgtgcggcagcctttgaatccaggagtcccc
atccgaggcatcaagatgaaatttgctgtgctgacaggattggtagaagttggggatgtg
tccaatagagacatagtcgatactgtatttaatctgcttgttgggggccactttgacttg
gaaatgaactttatcattcaagaagcagagggcatctcctgcatggtggagttgctggac
aagtgcgatgtcacctgccaggctgaggtgtggagcatgttcacagccatcttgaagaag
agcatccgcaatctacaggcttgcacagaagttgggcttgttgagcaagtgatcaagagg
attgacagagctgacaacatgattgcagatctcttggtggatttgctgggtgtgttggca
agctataacttgacagttcgagagctgaagttattctttagcaagcttcaaggagaaaaa
gggagatggccaccacatgctggaaagttattgtctgtgttaaaacacatgcctcagaag
tatggacctgatgccttcttcaacttccctggaaaaagtgctgcagctattgccttacct
cctatagccaagtggccataccagaatgggtttactttccacacttggctaagaatggat
cctgtaaataatatcaatgtggataaggataagccttacttatattgttttcgaacaaac
aaaggacttggttattctgctcactttgttggaggctgcttgattgtaacatccataaaa
tcaaagggaaaaggtttccagcactgtgtgaaatttgatttcaaaccacaaaagtggtat
atggtcactatagtgcacatctacaaccgctggaagaacagtgagcttcgctgttacgtg
aatggagagctggcctcttatggagaaataacgtggtttgtcaacaccagtgatacattt
gacaagtgtttcctgggttcttcagaatcagcagatgccaaccgagtattctgtgggcaa
atgacatctgtgtaccttttcagtgaggctctcaatgctgctcagatctttgccatctat
cagcttggtctgggatacaagggaacattcaaattcaaggcagaaagtgatctcttcctt
gctgaacatcacaaattgttgctgtatgatggcaaactatccagtgctattgcttttatg
tacaatccaagggctacagatgcacagctgtgtctagagtcatcccctaaggacaaccca
tcgatttttgttcattcgccacatgccctcatgctgcaggatgtgaaagcagtcttgact
cattctatccaaagtgctctgcactccattggaggggtgcaggtgcttttcccactcttt
gcacagttggattacaggcaatattcctcagagcacattgacacaactgtttgttctact
ttattggctttcatcatggagttgctgaagaactccatcgctatgcaagaacagatgcta
tcctgtaagggcttccttgtaataggacatagcctagaaaagtcttccaaagcccacgtt
acccgaactgtgctagagctctgccttgccttttcaaaatacctgagcaacttgcacacc
ggggcgcccttgctgaagcagctgtgtgatcatgttctccttaatcctgcaatatggatt
catattccagcacaggttcagctgaccctgtacacttacctgtctactgagttcgttggc
actgtgaacatatatggtgcaatccggcgagttgggacagttctcctggtcatgcatacc
ctgaagtattattactgggtggtgaatcctcaggatcgcagtggtataacccccaagggc
acagatgggccacgacctactcaaaaagagattttatctctgcgagcattcttgttgatg
tttgttaaacagctggtgatgaaggactatggaataaaagaagatgaattgcaggctatc
ctcaattacctgctcactatccatgaggatgacaatctaatggatgtcttacagttgctt
gttgctctgatgtcggagcatcccagctctatgatccctgcttttgatcagaggaatgga
ttacaggttgtctacaagcttttggcatcacaaagtgaaggcatcagagtgcaagctctt
aaagtgatgggatatttcttaaagcatcttgctccaaagagaaaagctgaagtcatgctt
ggacatggattgttctctttgttggctgaaaggctgatgcttcagacaagtttaatcacc
atgaccacgtacaatgtcctgtttgagattctgacagaacagatttgcactcaagtgatc
cataaacagcatcctgactcagattcaacagtgaagatacaaaaccctcagattttgaag
gttatcgcaatcctgctgcgtaattctccacagtgcccagaaactctggaggttcggaga
gcctttctttcagatatgattaaactttttaataacagcagagagaacaggaggagtttg
ctgcagtgctctgtctggcaggagtggatgctttccctttgctgtttcaaccccaagaac
tctgaggaacagaagataactgagatggtgtacaccatatttcgaattctgctctaccat
gcaatcaagtatgagtggggtggctggcgtgtatgggtggacacactgtccatcacacat
tcaaaggtaacttttgaaatgcacaaggagagtctttctcaaatgtacagggaataccaa
gggaaaggaggtgagggcagtggaatacatccttcaactcccattagaacaatctctgga
acaaaaaaagaagctaaaatcaagggaaagcagaaatgtttggagttaaaagatgcttct
gctccttcctgcattgccagtgacatggagtgtagtactgaaaagaaggagacaaatacg
tcatcagatggtgaccaacaagctcctttggtttgtaatcatagggaggagatagaagtg
gaagacaaagagactgcccaggatctagcagcagtgcctggtgtagaactttctccagaa
gcagtgaagcccagtgtttcagaaatcagtactggaatagctgaagctatcgaagattct
ctgagcaaagctgatgagcttgtggaagaaaccatggctgtctctgctgcttctttagca
acgcaaactgctttggaaggagaaactgcagaaagactggacaaatcagcagcagaggtg
gaagaggaagatgactttgttgatctgaaagaggaaagtagtatgcctttgccttcagaa
gaggttgacaaaacaaacaaggagcagagctcaagggaaatgacaacacaggacaaacca
ccagagaagccacccaaatctgtgcttttaaaatctgaaggtatggagggtgtggatggg
aaacaagaagtgacttctttaccagaagtagccattcagccagatttaggggggggaaag
aagctagatgaagagaagatgcttttcagtgaaaccaaaacagctgaaggaaaagcaaat
gcccatgtggcagagcctgctgtagcctctgacaagagaatcgccaaacttgatgtttcc
aatgttgcatcggatacggaaagactggaactgaaagctagcaagtgtctagaagcacct
ccacaccctagatccatacctgagacctcaaggcagcaagactcttcaggacgagagctg
gctgctgcatcagatgggcagaggagagaatctaggtcagctgtgttccggatcccggag
ttcaagtggtcactgatgcatcagcgcttgctcacagacttactcttttccatagaaaca
gatatacagatgtggagaagccattctacaaaaactgtgatggactttgtgaacagcagt
gacaacgtcgtttttgtgcataacacaattcacctcatctctcaggtgatggacaacatg
atcatggcttgtggtgggatattgccgttgctttctgctgccacatctgctactcatgaa
ttggaaaatattgagccaactcaaggcctttcagtagaagcatctttaacatttctccag
agattaatcaaccttgtggatgtgctgatttttgcaagctctcttggttttactgaaatt
gagtctgagaaaaatatgtcatctggaggagttctgcgacaatgtcttcgcctggtgtgc
gcagtagcagtaagaaattgcttggagtgtcagcagcatgcacagatgaaacctactgga
gacactgtgaagaaccaaaaagcagtgcagggctttataggaacagggaagtctgcggca
aagagtccagtggacatagtgactggtggcatttctccaatccgagaccatgacagactt
ctgcaggatatggatattaatcgactccgagcagtagtgttcagagacatagaggatagt
aaacaggctcaatttttggctttggctgttgtgtattttatttctgtgcttatggtttcg
aaatacagagatatactggaaccccagaatgaaagacaagcaccaaaccatagccaggcc
ttcaaggaggcagagaatgggaacaatgaaactcctcctgcagatgtggaaaacccacct
gctgctcttgggacttcagcctccactgaagattcagaaagtacagcagttgtacaaaga
agggattctggccttggggaggagccggcttcagggcaaatgaacagttccagtagtgtt
gctgaagcaggacctctgagtgtcagtgcaggtcctgatgcagtcagtgaagtcctgtgc
acgctttcattagaagtgaagaagtctcaggaggacagaaacaagacaggacctgaagac
agtaagcctgaaacttctgtgccagctgcaaaaaatgtcaatgtaaaggacatcctgaga
agcttggtaagcaccccagctgatgggactgcagtggatgctgcttttatgccaccaacc
ttccttggagctcttggtgatggagcggctgagcaacctgtacagttccattcctttgac
aggagtgttgttgtaccaccaaagaaatcatccatctcctcttctgcagctgctatgagt
attcctgcaaatgctgtcagcgtggtttcctctgtagattcaacccaaaccctggatttg
tcaggagagtctcctggtgagggatcatctcattcaaaattgccatctgtccctacagtt
tcttcagtgcctgaggattcggcttcaaatatgagcattacagacaggcttgaacacgct
ctggaaaaagctgccccgcttctgagagagatttttgtggattttgctccctttctttct
cggactcttttgggcagccatgggcaggaattgctgatagaaggtacaagtcttgtgtgc
atgaaatccagcagttccgtggtggagctggtgatgctgctttgctctcaggagtggcag
aactctatacaaaagaatgccggccttgccttcattgagcttgtcaacgaaggaaggttg
ctgagtcagaccatgaaggaccacttggtaagagtggctaacgaagcagaatttatcttg
agcagacagagagcagaggacattaaccgccatgcagaatttgagtcactgtgtgcccag
tattctgcagacaaacgggaagaagaaaaaatgtgtcatcacctgataatggcagctaag
taccgagaccaggtgaccgcaactcagctggtacagaaaattgtcaacattctgacagac
aagcatggagcctggggaagctctgctccaagtcgtcctcgtgagttctggcgccttgac
tactgggaagatgacttgcggcgccggcgacggtttgtgcgtaaccccctcggatcgaca
catcctgaagcgacactaaaagcagctggagagcatgctcctgatgaggatatacttgtt
aaaggaaagcaatccatcaagagtcaagtattaggaaatcagaactcagaaagtgagatt
ctgctggaaggcgatgacgatatcatgtcattcatggaggaaagagaagtggagagctta
acaggtccagttgccctaagcacaccagctcagcttgtggcaccctcaggggtagtgaaa
ggcactctttccatcactctttctgagctctactttgaggtggatgaagaagatcccagt
tttaagaaaatcgacccaaagattctggcatatacagaaggactccatgggaaatggctc
ttttcagagatccgatctatcttttcccgacgctaccttttacagaatacagccctggag
atattcatggcaaacagagtgggtgtcatgttcaactttcctgaccaagcaacagtaaag
aaagtggttaactgtctgcctcgggttggcattggtaccatctttggactaccccagacc
agacgcatttctttggccagtccacggcagatcttcaaagcttccaacatgacccagcga
tggcagcaccgagaaatctccaacttcgagtacctgatgtttctgaacactatagcaggt
cgaacttacaatgatttaaatcagtaccctgtcttcccttgggttatcaccaactatgaa
tcagaggagttggaccttacacttcctagcaacttcagggatttgtcaaagcccattgga
gctttgaacccaaagagagcagcgttcttcgcagagagatacgagtcctgggaagatgat
caggttccaaaatttcactacggcacacactattcaactgccagctttgcgctcacctgg
ctgctaagaattgaaccctttacaacacttttcctaaatctacaaggtgggaagtttgat
catgcagatagaactttttcatctgtttcaagagcctggcgaaatagtcagcgtgacact
tctgatatcaaggaactgattcctgaattctattacctcccagagatatttgtcaacagc
aacaattacaatctgggagtgatggatgatggaacagttgtgtctgatgttgaacttcca
ccgtgggccaaaaccccagaagaatttgttcggatcaacagactggcattagagagtgaa
tttgtatcctgccagcttcaccagtggattgatctgatttttggctacaaacagcaaggc
ccggaggctgtcaggtccctgaatgtattctactatttgacttacgaaggagctgttaat
ttaagttcaataacagatcctatattgagagaggctgttgaagctcaaatacgaagtttt
ggacagaccccttcccaactgctcatagaaccacatcctccaagaagttctgccatgcag
gtgagtccgttgatgttcacagaccaagctcaacaggacgttatcatggttctaaagttt
ccatccaactctcctgtcactcatgtagcagccaacacccagcctggtctggccactcct
gctgtgatcacagttactgcaaacaggctatttgctgtaaacaagtggcataatcttcct
gctcatcaaggtgctgtacaggaccagccttaccagctgccagtggaaatcgatcctctc
atagccagcaatacagggatgcacagaaggcaaatcactgaccttttagaccaaagcatt
caggttcactcccagtgttttgtcatcacctctgacaatcgttacatcctggtctgtggc
ttctgggacaagagcttccgagtttattcaactgactcaggtaaactgatgcaggtagta
tttggacactgggatgttgtcacctgtcttgctcgttcggagtcctatattggaggaaac
tgctacattctctcaggatcccgagatgcaaccttgctgctgtggtactggaatggcaaa
accaacatcattggtgataacccaagaggtgattttgcaactcctcgagctattttgaca
ggacatgactatgagatcacatgtgctgccatttgtgctgagcttggcctggtcataagt
ggttcaaaagaaggaccgtgtctcatacattctatgaatggagatctactgaggacgtta
gaaggtcctgaaacattagcaggtccccaaaactgcctgagacccaaacttattcaagct
tcaagagaaggccactgtgtcatatattatgagaatggcctcttttgtgtattcagcgtg
aacgggagacttcaagccactatggaaacaaatgacaagataaaggcaattcagctgagt
cgagatgggcagtacctgctcacaggtggagacaatggagttgtcatggtgtggcagatg
tgggacctcaagcagctttttgcttacccagggtgtgatgctggaatccggtccatggcc
ctgtcgtatgaccaaaggtgcataatgactggcatggcttcgggcagcatcgtggttttc
tacaatgatttcaatcgttggcaccacgagtaccaaaccagatactga
DBGET
integrated database retrieval system
