Dryobates pubescens (Downy woodpecker): 104297292
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Entry
104297292 CDS
T08526
Symbol
ACTN1
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-actinin-1
KO
K05699
actinin alpha 1/4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04510
Focal adhesion
dpub04517
IgSF CAM signaling
dpub04518
Integrin signaling
dpub04520
Adherens junction
dpub04530
Tight junction
dpub04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104297292 (ACTN1)
04518 Integrin signaling
104297292 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104297292 (ACTN1)
04520 Adherens junction
104297292 (ACTN1)
04530 Tight junction
104297292 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104297292 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104297292 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpub04812
]
104297292 (ACTN1)
04147 Exosome [BR:
dpub04147
]
104297292 (ACTN1)
Membrane trafficking [BR:
dpub04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104297292 (ACTN1)
Cytoskeleton proteins [BR:
dpub04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104297292 (ACTN1)
Exosome [BR:
dpub04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104297292 (ACTN1)
Exosomal proteins of colorectal cancer cells
104297292 (ACTN1)
Exosomal proteins of bladder cancer cells
104297292 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
104297292
NCBI-ProteinID:
XP_009895504
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLG
MIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHR
HRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSF
YHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENT
MQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDIN
NAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETA
TLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDN
LGSLTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQ
GLSTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWE
HVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLE
DQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIA
RTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGND
AQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITV
DELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttctggaagtcatttcaggtgaacgtttggctaagcctgaaagaggcaaaatg
cgagtgcacaaaatatccaacgtgaacaaggccttggatttcattgccagcaaaggagtc
aagctagtgtctattggagcagaagaaatcgtggatggcaatgttaaaatgactcttgga
atgatctggaccatcatccttcgttttgccattcaggatatctcagttgaagagacatct
gctaaagagggacttttgttatggtgtcagaggaagacagccccctacaaaaatgtaaac
atccagaacttccatataagttggaaggatggccttggtttctgcgctttaattcataga
caccgtccagagctcattgactacgggaagctacgaaaggatgatcctctcactaatcta
aacacagcttttgatgtggctgagaaatatctggatattcccaagatgctggatgcagaa
gacattgttggaactgcccgtcctgacgagaaagccatcatgacctatgtttctagcttc
taccacgccttctcaggagcccagaaggcggagacagcagcaaatcgtatctgcaaggtg
ctggcagtcaaccaagaaaatgaacagctcatggaagactatgaaaaactggccagtgat
ctgctggagtggatccgtcgcaccatcccctggctggagaaccgggccccagagaacacc
atgcaagccatgcagcagaagctggaggactttcgggactaccgccgcctgcacaagccc
cccaaggtccaagagaagtgccaacttgagataaacttcaacactttgcagaccaagctg
cggctcagcaataggccagccttcatgccttcagaagggaagatggtttcggatataaac
aatgcctggggtggcctagaacaggctgagaagggctatgaggagtggttgttgaatgag
atccgaaggctagagaggctggatcacctggcagagaagttccggcagaaggcatccatt
cacgagtcgtggacagatggtaaggaagcaatgctgcagcagaaggattacgaaactgct
accctctcggagataaaggccctgctgaagaaacacgaggcctttgagagcgacctggct
gcacaccaggaccgcgtggaacagattgctgctattgcacaagagctgaatgagctggac
tattatgactctcccagtgtcaatgccaggtgccagaagatctgtgatcagtgggataat
ctgggttccctaacccagaaacgtagagaagccttggagaggacagagaagctactggaa
acaattgaccagttgtacctggaatatgccaaacgagctgcccctttcaataactggatg
gaaggggccatggaagacctgcaggacacattcattgttcacaccattgaggagatccag
ggattaagcacagcccacgaacagttcaaagccactttgccagatgctgacaaggagcga
caggccatcctgggaatccacaatgaagtctcaaagattgtccagacataccatgtcaac
atggcaggaacaaatccttacactacgatcaccccacaagagatcaatgggaaatgggaa
catgtgcggcagctggtgcccaggagggatcaagccctgatggaggagcatgcgcgccag
cagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaatgtcattgggccctgg
attcagaccaagatggaggagatcggccgcatctcgatagagatgcacgggaccctggag
gaccagctcaaccacttgcggcagtatgagaagagcattgtgaattacaaaccaaagatt
gaccagttggaaggagaccaccaacagatccaggaagcgcttatctttgacaacaaacac
accaactacaccatggagcatattcgagtgggctgggagcaattactaacaacaattgct
agaaccatcaatgaagtggaaaaccagattctgacccgtgatgccaaaggaatcagccag
gagcagatgaatgagttccgggcttctttcaaccatttcgacagggaccactccggcaca
cttggccctgaggaattcaaagcctgtctcatcagcttgggttacgatattggaaacgat
gcacagggagaggcagagtttgcccgcatcatgagcatcgtcgacccgaaccgtttgggt
gtagtgacgttccaggccttcatcgacttcatgtcccgggaaacagcagatacagacact
gctgaccaggtcatggcttccttcaagatcctggctggagataagaactacatcactgtg
gacgagttacggcgagagctgcctcctgatcaggccgagtactgcattgccaggatggca
ccctacaacggccgtgacgctgtgcctggtgccctggactacatgtccttctccacggcg
ctctatggtgaaagtgacctttaa
DBGET
integrated database retrieval system
