Dryobates pubescens (Downy woodpecker): 104297323 Help Entry 104297323         CDS       T08526                                  Symbol DMXL2 Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism dpub  Dryobates pubescens (Downy woodpecker) Pathway dpub04142   Lysosome Brite KEGG Orthology (KO) [BR:dpub00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     104297323 (DMXL2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dpub04131]     104297323 (DMXL2) Membrane trafficking [BR:dpub04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     104297323 (DMXL2)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     104297323 (DMXL2)    RAVE complex     104297323 (DMXL2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_RIG_1st Motif Other DBs NCBI-GeneID:  104297323 NCBI-ProteinID:  XP_009895541 LinkDB All DBs Position Unknown AA seq 2936 aa AA seqDB search MSYNLAWDPQGNRLLTATDFLQLWAPPSSDILEEDEDDDSVSRIKDDKVLPVLNDWKCVW QCKTAVSVHLMAWSPDGEYFATAGKDDCLLKVWYPMTGWKSSLLPQENEEKKKCTEPVNF SFVYLAHPRAVTGFSWRNISKYMPRGLVCNVLLTSCLDGICRLWAETLLPEDTLLGEQIC ETSTSSISTTSQSGKQKDKIQHALETIHHLKNMRKGQRRSSVLVTHTDVLPDHQGTHEVQ RHISHHANALGHFHIAASINPNTDIPSVLAGTAFNIDEGNGGFVVHWLNNKEFNFTSSIE VFMQHLRKLSEQQTEQDFDVEVEEEEEMEEKERGLHMKLDHDLSIDRESETGTGTGSSEH EDGEREGSPKTSLLAGPRMPLPTVLLDRKIELLLTEWNRNPDMLFTIHPVDGTFLVWHVK YLDEHTPGIFRQVQVSFSSRIPVAFPSGDASSLSKNIMMYACPVFIKDNSDAAYQKTMDF PDSTLTNKGPSLAQDSAIISPIVMMISKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYC GHRFHLNDLACHSVLPLLLTSSHHNALLTPEPDSSWDSDRINRIMDPLKHMKGSPRQQLK NAATRTFHDPNAIYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPS YCLGTYCNSASACFVASDGTNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTA RPGCIIELDAITNKCGSNTQLLHVFQEDFILGYKPHKEDVEEKETEIFFQPSQGYRPPPF SEKFYLVVIEKDTNGCSILQMWHLHLKSVQACLAKPTEATSSENKLSVPEQKTVDSSPDV SPGTSPIPRSSSIANLQTASKLILSSRLVYSQPLDLPVGVEVVRATPSAGHLSSSSIYPV CLAPYLIVTSCSDNRVRFWRCTVETDLNSKNEERETYHWRKWPLMNDEGEDNSSTVSIVG RPVAVSCSYTGRLAVAYKQPMQHNGFVSKEFSMHVCILECESTGGSEWVLEQTIHLDDLV KVGSVLDSRVSVDSNLFVYSTSDTFLNKDKYSVPSIKHLVHLDWVSKEDGSHILTVGVGA NIFMYGRLSGIVTDQTSIKEGVAVITLPLGGSIKQGIKSKWVLLRSIDLVSSVDGTPSLP VSLSWVRDGILVVGMDCEMHVYAQWKHAVKFGDGESDVFTSEDSTTQDPLKTSLIAKKTS VIDGAGIVDDVFGMPTVIQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSH LVKCIAGEVAIVKDIEAGEGTGPKRHLSRTISVSGSTAKDTITAGKDGTRDYTEIDSIPP LPLYALLAADQDATYVSEETSKIPQGSEDHAKRKTEDQYSDLFQIQPVTTEDFIDFEPEK RESKSKVINLSQYGPTYFGREHASVLSSHLMHSSLPGLTRLEQMFLVALADTVAMTSTEL DENRDKNYSGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSE AEEELINMIPAIQKGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAAL FYLAMKKKAVVWGLFRSQHDEKMTAFFSHNFSEDRWRKAALKNAFALLGKQRFEQSAAFF LLAGSLKDAIEVCLEKMEDIQLAMVIARLYESEFETSVTYTSILYEKILGCHKDGSGFSC TKLHSDPFLRSIAYWIMKDYTRALDTLLEQTPKEDDENPVIVKSCNPVVFSFYNYLRTHP LLIRRYFSSPEGTLATLGLKTEKSFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKI PKVRKKSAGGTEKDLSSPPIQAAVSDSKALRDGAGSADIDWSKPISASSALENTVESSSQ FDWSQPAVKFDDEPLTLDWGDDKDGSDEEDKDVGIMMKKSKSDSKNEDDDERTSETNIQQ TAHGETPDAGDTEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEI AAMHEICNHDAGGKDYCKTYTKVNGDLLEHDDIMDKPDIGSYERHQIERRRLQAKREHAE RRKWWLQKNQALLRVFLSYCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLP TTLPLLSASIASTKTVIANPVLYLNNHIHDILYTIVQMKSPPHPNVEDVKVYTLHSLAAS LSASIYQALCDSHSYSSQTEANQFTGMVYQGLLLSDRRRLRTESIEEHATPNSPPAQWPG VSSLINLLSSAQDEDQPKLNILLCEAVIAVYLSLLIHALATNSCNELFRLAAHPLNTRMW AAVFGGGVKLLVKPRRQSENIPAPPLPSEEMDKHRRRFNMRMLVPGRPVKDSTVPPPVPA ERPSYKEKFIPPELSMWDYFMAKPFLPLSDSGVIYDSDESAHSDEEEDDAFLSDVQIQEH KDANSYSWALLHLTMVKLVLHNVKNFFPIAGLEFTDLPVTSPLGIAVIKNLEHWEQILQD RMDQFEGPPPNYINTYPSDLGVGAGPALLRNKAMIEPENTPFKSKDYSALPAKRLWHFLV KQELLQETFIRYIFTKKRKQSEVEADLGYPGGKAKIIHKESDMIMAFAVNKANSNEIVLA STHDVQELDISALLAAQSFIWIGEEYDRESKSSDDDFRGSTTTLTQSTAPSFGVHQIQPS SSMPWLGSGQTSTGAGVLIKRNLNNVKRMASHPVHQYYLTGAQDGSVRMFEWTRPQQLVC FQQAGNARVTRMYFNSQGNKCGVADGEGFLSIWQVNQTTSNPKPYLNWQCHSKTTSDFAF ITSSSLVATSGQSNDNRNVCLWDTLVSSANSLIHAFTCHDHGATVLQYAPKHQLLISGGR KGYICIFDIRQRQILYTFQAHESAVKALALDPSEDYFVTGSAEGNMKVWRLTGYNLIHSF KNEHAKQSIFRNIGAGVTQIETVQGNRIFSCGADGTLKMRVLPNAFNVPSGIFDIL NT seq 8811 nt NT seq  +upstreamnt  +downstreamnt atgtcttacaaccttgcttgggatcctcaaggtaacaggctgctgacagcaactgacttt ttgcaattgtgggcccctccatctagtgacattctagaagaagatgaagatgatgattct gtcagtcggatcaaagatgataaagttctcccagttctaaatgactggaaatgtgtctgg cagtgcaagactgcagtatcagtacatttgatggcatggtcacctgatggtgaatacttt gcaacagctgggaaggatgactgcctcttaaaagtttggtatcctatgactggttggaag tcgtctcttctgccccaagagaatgaagaaaagaaaaaatgcacagagcctgtcaacttc tcctttgtttatttggcacatcctcgagcagtgacaggattctcatggcgtaacatcagc aagtacatgcccaggggcttagtctgtaatgtattacttacatcatgtcttgatggcatc tgtcggctgtgggcagagacgctgttaccagaagatactcttcttggtgagcaaatctgt gaaactagcacttccagcattagcaccacctctcagtctggaaagcaaaaggacaaaata cagcatgcactagagacaattcaccatttgaaaaacatgagaaaaggacaaaggagatct tcagttcttgttacccacacggatgtattgccggatcaccagggtactcatgaagttcag cgtcacatttcacaccacgcaaatgcccttgggcacttccacatagcagcaagcatcaac cctaatacagatattccgtcggtcttggctggaacagcttttaatatagatgaaggaaat ggaggcttcgttgttcactggttgaataataaagaatttaattttacatcctctattgaa gtatttatgcagcatctaagaaaactttctgagcagcaaacagaacaagattttgatgtt gaagttgaagaggaggaagaaatggaagaaaaagagagaggcttacatatgaaattagat cacgacttgtctatagatagagaatcagagacaggcactggtacaggctcttcagaacat gaagatggtgaaagagagggaagccccaaaacatctctactagcaggcccgcgtatgcct cttccaacagttttgttagatcggaaaattgagttgctccttactgaatggaacagaaat ccagatatgctttttaccattcatcctgttgatggtacctttttggtgtggcatgtgaaa tatttagatgaacacactccaggcatctttcgacaagttcaggtttcattttcttctagg attcctgttgcatttccatcaggagatgctagctcccttagcaaaaatattatgatgtat gcttgccctgtctttataaaagataacagtgatgcagcatatcagaagacaatggatttc ccagatagcactctaacaaataaaggaccaagccttgcccaggacagtgcaataatttct cccatagtaatgatgatttccaaacatatagatggctctctaaatcagtgggcagttact tttgctgataaatcagctttcactactgtgctgactgtatcacataaattcaggtactgt ggtcaccgtttccatctcaatgatctagcttgccattctgttttaccactactgctaaca tcttctcatcataatgctctgttaactcctgagcctgacagttcctgggactctgacagg ataaacagaataatggatccccttaaacatatgaaaggttctcctaggcagcaacttaaa aacgcagcaacccgtacattccatgacccaaatgcaatctatagtgagctgattctgtgg cgtgtagaccctataggacctttatcatacactggaggagtatccgaattggctcgaatt aactctctgcacacctccgctttctctaatgtagcctggcttccaacacttatccccagc tattgccttggtacatactgcaactctgctagtgcttgctttgttgcatctgatggcaca aacttgagactctatcaagccgttgtagatgcacgaaaacttctagatgaattatctgac cctgaatcatctaaacttattggggaggtgtttaacattgtgagccaacagtctactgct cgaccaggatgcattattgaacttgatgctataactaacaaatgtggctcaaacacacaa ttgcttcatgtctttcaagaagacttcattttgggatacaaaccacacaaggaagatgtg gaagagaaggaaaccgagatatttttccagccatcacaagggtatcgtccaccacctttc tcagaaaagttctacctagtagtaattgaaaaagataccaatggctgctccattcttcag atgtggcaccttcatctcaaatctgtgcaagcctgtctagcaaaaccaactgaagctact tcatcagagaataagcttagtgtacctgagcaaaagaccgtggattcttctccagatgta tcacctggcacaagtcccattccacgatcttcatcaattgcgaatcttcagactgcgagt aaactcattctgagctccagacttgtgtatagccaacctctggatcttcctgttggtgta gaggtagtaagagcaactccttcagcaggtcacctgagttcttcatcaatatacccagtc tgccttgcgccttacttgatagtaacgtcatgttcagacaacagagtgcggttctggaga tgtactgtagagacagacctaaacagcaaaaatgaagaaagagaaacgtatcattggaga aaatggcctttaatgaatgatgaaggagaagacaacagcagtacagtgagcatagtagga aggccagttgctgttagctgttcttatacaggacgtcttgcagtagcatataaacaacca atgcagcataatggttttgtttccaaagaattttccatgcatgtttgtatacttgaatgt gagtctacaggaggatcagaatgggttttggaacagacaattcatctggatgatttagtt aaggttggaagtgtgcttgattcaagggtcagtgtagatagtaatctgtttgtttacagt acatcagatacttttttgaataaagataaatattcagtgcccagcatcaagcatctggtg catttggactgggtgtcaaaagaagatggttcacatatattgacagttggagttggtgcc aacatcttcatgtatggaagactttcaggaattgtaacagatcaaacgagcatcaaggag ggagtagctgtcattactttaccactaggtggtagcataaaacaaggtataaagtcaaag tgggtgttgcttagatcaattgatttggtatcatctgtagatggcactccttcactgcct gtttctctgtcctgggtgagagatggtatactggtagtgggaatggactgtgaaatgcat gtttatgcccagtggaaacatgctgtcaagttcggtgatggagaaagtgatgtgtttact tctgaagactctacaacacaagatccactcaaaacaagcttgatagctaagaagacaagt gtaattgatggggcaggtattgtggatgatgtttttggcatgccaactgtaattcaggat ggtggtctttttgaagctgctcatgtgctttcacctactttaccccaatatcatccaacc cagttattagaacttatggatctgggtaaagtacgacgagccaaagccattctatcacat ttagttaaatgtattgcaggagaagttgcaatagttaaagacatagaagctggagaagga actggtcctaaacgccatctttctcgcaccattagtgtaagtggtagtactgcaaaggat accatcacagctggaaaagatggtactcgtgattatacagagatagactcaataccccct ctgccgctgtacgcgctgcttgctgcagatcaagatgccacttatgtttctgaagaaact tcaaaaatacctcaaggctctgaagatcatgctaagagaaaaacagaggatcagtactca gatctattccagattcagcctgttacaactgaagactttattgattttgagcctgaaaag agggagagtaaatccaaagttattaatctgtcacaatacggtccaacttactttggccga gaacacgctagtgtcctttcaagccacctgatgcactcaagtctaccaggcctcactcgg ctggagcagatgttccttgtagctttggcagacacagtggccatgacaagcactgaacta gatgagaacagagataagaattactcaggaagagataccttagatgaatgtggcttacgg tacttgttggctatgcgcttgcacacttgccttctgacatcactcccacctctgtatcga gttcagctgcttcaccaaggtgtatctacttgccattttgcatgggcttttcattctgag gctgaggaggagctgatcaacatgattcctgctatccagaagggagacccccagtggtct gaattaagagccatgggtattggttggtgggtcaggaatatcaacacactccgaaggtgc atcgagaaggttgcaaaagcttcattccagaggaacaatgatgccttagatgctgcactt ttttaccttgctatgaagaaaaaggcagtggtgtggggtctgtttaggtctcagcatgat gaaaagatgactgcttttttcagccataacttcagtgaagatagatggcgcaaagctgct ctaaaaaatgcttttgctttgttgggaaaacaacgatttgaacaatcagctgcatttttc ttgttggcaggttcactgaaagatgctatagaggtgtgccttgagaaaatggaagacatc cagttggctatggttattgctcgtttatatgaatcagagtttgaaacctctgtcacatac acctccattctttatgaaaagattttgggttgccataaggatggaagtggattcagctgt actaaattgcattctgatccatttctgagaagcattgcatactggataatgaaagattac actagggcactggacacattattggaacaaacacctaaagaagatgatgaaaacccagtt attgtcaagtcgtgcaatccagtggtattcagtttttacaattaccttcggacccaccct ttgctcatccgaagatacttcagctcaccagaaggaactttggccaccttaggtctgaaa actgagaaaagctttgttgataaaattaatcttatagaaagaaaattgttcttcactact gcaaatgctcattttaaagtgggctgccctgtcctcgctcttgaggtcctttccaaaatt ccgaaagtaagaaaaaagtctgctggaggcacagagaaagatttgtctagtcctcctata caggcggctgtttcagattccaaagccctaagggatggtgctggaagtgctgatatagac tggtcaaagccaatctcagcttcctctgctttggagaatactgttgagtcatcatcacaa tttgattggagtcaaccagcagtgaaatttgatgatgagccccttactcttgactggggt gatgacaaagatgggtcagacgaagaggacaaggatgttggtataatgatgaaaaaatca aaatcagattctaagaatgaagatgatgatgagagaacctcagaaaccaatatccaacaa acagcacatggggagactcctgatgcaggagataccgaggttgatgttattgctgaacaa ctgaagttcagagcctgtttgaagatccttatgactgaactgaggactttggctacaggt tatgaagtagatggtggaaagctcagatttcagctgtacaactggctggaaaaagagata gctgctatgcatgaaatatgcaaccatgatgcagggggtaaagactactgtaaaacatat accaaagtaaatggggatctcctggagcatgatgatataatggataagccagacattggc tcttatgaacggcaccagatagaacgacgcaggctgcaagcaaaacgagaacatgctgaa aggcggaagtggtggctgcaaaagaaccaagctcttctaagagtttttctaagttactgt agtcttcatggggcacaaggtggtgggttagcatctgtaagaatggaactgaagttcttg ttgcaagagtcccagcaggaaactactgtaaaacaacttcagtctccactaccattaccc acaacactaccgttgctttctgcaagcatagcatccacaaaaactgtgatagcaaatcct gtgctgtatttaaacaaccatatccatgatattctttacactattgtgcagatgaagtca ccaccacatcctaatgttgaagatgtcaaggtgtacacacttcattctttagcagcttca ctttctgcatccatctatcaagcactatgtgacagccacagctacagcagtcaaacagaa gcaaatcagtttacaggaatggtttatcaaggactgcttttgagtgatcgacgtagactg aggactgaaagtattgaagagcatgcaactccaaactcacctcctgctcagtggcctggt gtgagttcacttatcaatctcttaagttcagctcaggatgaagatcaaccaaagttaaac atcctactttgtgaggctgttatagctgtctacctgagtctccttatacatgcccttgca accaattcatgtaatgaattatttagactagcagcccatcctttgaacactcgaatgtgg gctgctgtgtttggaggaggagtgaaacttcttgtaaagcctcgaaggcagtcagaaaat attccagctccacctcttccatcagaagaaatggataaacatcgccgtcgttttaacatg agaatgctagtgccaggaagaccagtaaaagacagcactgtaccaccacctgtacctgca gaaagaccctcttacaaggagaagtttatccctccagagcttagcatgtgggactatttt atggcaaagccatttcttcctttatcagacagcggtgtcatatacgattccgatgaaagc gctcacagtgatgaggaagaggacgatgcattcctttctgatgtgcagatccaggaacac aaagatgccaattcttacagctgggctcttctgcatctgacgatggtaaaattggttctg cacaatgttaaaaacttctttcccattgctggtctggaattcactgatctgcctgtaaca tcaccgttgggcattgctgtaataaaaaacttggaacactgggaacagattcttcaagac agaatggaccagtttgaaggcccaccaccaaactacatcaatacttaccctagtgacctt ggtgtaggggcaggaccagctcttctccgcaataaagcaatgattgaacctgaaaacaca ccattcaaatcaaaggattattcagctcttccagcaaaaaggctctggcactttcttgtg aagcaagaacttcttcaggagactttcataagatacatattcactaagaaacgaaagcaa agtgaggttgaagcagatcttggctaccctggaggaaaagcaaaaatcattcacaaagaa tcggatatgataatggcatttgcagttaataaggcaaacagcaatgaaatcgtcttggca tctacacatgatgttcaagaactcgatatttcagctctcctggctgctcagtcatttata tggattggggaggaatatgacagagagtctaaaagttctgatgatgattttcgtggttct accacaacactgactcagtcaactgcaccatcttttggagtgcatcagatacaaccatct tcatccatgccatggttaggcagtggtcaaactagcactggagctggtgtgcttattaaa agaaatctgaacaacgtcaagagaatggcttcgcatccagtccaccagtattatctgaca ggtgcacaagacggtagcgttcgaatgtttgagtggacaaggccccagcaattggtatgc ttccagcaggctgggaatgccagggttacaagaatgtatttcaattcccagggcaataag tgtggtgttgctgatggtgaaggatttctaagtatttggcaagtaaaccaaaccacctca aatcctaagccctatctgaattggcagtgccacagtaaaaccacaagtgactttgcattt ataacctcttcaagtctagttgctacatcaggacagtccaatgacaacagaaatgtgtgc ctctgggacactttggtttcatctgctaacagtcttatccatgccttcacttgtcatgat cacggtgccacagtacttcagtatgcacctaaacatcaactgctaatttctggaggtagg aagggatatatctgcatctttgacatcagacagaggcaaatcctttacaccttccaagca cacgaatcagctgttaaggcccttgcactggatccctctgaggactattttgttacaggc tcagcagaaggtaacatgaaggtgtggagactgactggctataatctaattcattcattt aaaaacgaacatgctaagcagtccattttcagaaatattggtgctggtgtcacccagatt gaaactgtgcaaggcaatcgtatcttctcctgtggagcagatggcacactgaaaatgagg gttcttcccaatgcttttaatgtaccttcaggcatttttgacattctgtaa

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