Dryobates pubescens (Downy woodpecker): 104297371
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Entry
104297371 CDS
T08526
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03440
Homologous recombination
dpub03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104297371 (BLM)
03460 Fanconi anemia pathway
104297371 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpub03032
]
104297371 (BLM)
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104297371 (BLM)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104297371 (BLM)
DNA replication proteins [BR:
dpub03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104297371 (BLM)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104297371 (BLM)
Bloom's syndrome complex (BTR)
104297371 (BLM)
FA (Fanconi anemia) pathway
104297371 (BLM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BDHCT
RecQ_Zn_bind
BDHCT_assoc
Helicase_C
HRDC
RQC
ResIII
UCC1_N
Motif
Other DBs
NCBI-GeneID:
104297371
NCBI-ProteinID:
XP_009895601
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MRSMSNLFRESPTGGSSTTGNSESRPGKVATTQPVTASDPSAEDAGRASQLEQQLYGVME
EICKLVDAIPLCELQALSCAKDLLQKRDLRRKLLVSSATLNKSSTKTFPRKGAVEQSPLS
CPSPASCPGPSWSFSSDRNSPKSTNLLSGTPNASSASTQKNQTLGSSYASEPGVEGIPCP
GAWAVSSPKGNGTGRASLSLHSQTSFNSSWGEKPGVRSTGNHLLERPLTSTALRAPSRAP
AGPPAGDTQAVNDADLDLDHFDIDDFDEDWEDLVNVSAPETPAYQPIREGPPAKSLLSKI
MSRAKGPAAVSSPAAPKSGFSMAAKNPSDPPANNPALERFRGMKFSHSEEMMTVFHKKFG
LHCFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTIVISPLRSLIIDQV
QKLKTLDIAATYLTGDRTDADASKIYMQLCKKDPVIKLLYVTPEKVCASSRLMSALENLY
DRKLLERFVIDEAHCVSQWGHDFRPDYKRLNVLRKKFRSVPMMALTATANPRVQKDIQNQ
LEMLKPQVFTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTT
AAILQKEGLAALAYHAGLTDSNRDLVQKKWINQEGCQVICATIAFGMGIDKPDVRYVIHA
SLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLIMMEKDGNSHSRQTHFNNLY
SMVHYCENVVDCRRIQLLAYFGETNFNPTFCKDHPEVICDNCSRKKDYRSRNVTEEVKSI
VRFVQEHCGQGRRGSERKHTGSGRYTLNMMVDIFLGKTSAKIQSGIFGKGAAYSRHNGER
LFRKLVLDKILDEDLYITANDQAVAYVILGERAQAVLDGALQVEFHETESASDIRKQRAS
MAKMSQREEMVKKCLGELTDTCKTLGKVFDVHYFNIFSTSTLKKIAETLSSDVEVLLQID
GVTEDKLEKYGAEIIKVMEKYSEWTTPEETPCPSVDTATGSQGTSEGDEEAEGGATTSSY
FSNNANQRRKRKRPPNFRESKRKKTSNGGSQQFRPRGYSKHRRTKKPFGSKAPAASGGSS
VSYSVGATQGAAGKLGIMAPPKPKARHFLQPSYSVF
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcatgagtaaccttttcagagagtctcctactggtggaagttccacgactggc
aacagcgagtccaggcctgggaaggtggccaccacgcagcctgtcactgcaagtgacccc
agtgcagaggatgcagggagagcctctcagctggagcagcagctgtatggtgtgatggag
gagatctgcaagctggtggatgccatcccactgtgtgagcttcaggctctgtcttgtgcc
aaagatcttctccagaagcgagacctcaggagaaaattgctggttagttctgccaccttg
aacaaaagcagcacaaagactttccccaggaagggggctgtggagcagagccctctctcc
tgtcccagtcctgcttcctgtcctggtcccagctggagcttcagttctgacagaaactca
cccaaatccaccaacctgctttctgggactcctaatgcaagcagtgcttctacccagaag
aatcaaactttgggcagctcttacgcttcagagccaggtgtggaggggattccctgcccg
ggagcctgggcagtgtcctctcccaagggcaatggcacagggagggcttccctcagcctc
cactcccagacgtccttcaacagcagctggggtgagaaaccaggggtgaggagcactggg
aaccatctgctggagaggcccctgaccagcacagctctgagagctccaagcagagctcct
gctggccctcctgcaggggacactcaggctgtgaatgatgcagaccttgaccttgaccac
tttgatattgatgattttgatgaggactgggaggacctggtgaatgtgtcagcacctgag
acacctgcctaccagcccatcagggaagggccacctgccaaatcactcctatcaaagatc
atgtccagagccaaaggacctgctgctgtatccagtcctgctgctccaaaatcaggcttc
tccatggcagccaagaacccttcagaccccccagccaataaccctgcactggagcgtttc
aggggcatgaagttctcccactctgaggaaatgatgactgtgtttcacaagaagtttggt
ttgcactgcttcaggacaaaccagctggaggccatcaatgctgctctgctgggtgaagac
tgcttcatcttaatgcccactggtggtggcaaaagcctttgctaccagttaccagcctgt
gtctctgctggagtcaccattgtcatctccccactgaggtcactgatcatagaccaggtg
cagaagctgaagactttagatattgctgcaacatacctgactggtgacagaacagatgca
gatgcctccaagatctacatgcagctgtgcaaaaaggatcctgtaataaagctcctctac
gtcaccccggagaaggtctgtgccagcagcaggctgatgtcagccctggaaaatctctat
gacaggaagctcctggaacgttttgtcatcgatgaggcccactgtgtcagccagtggggc
cacgatttccgaccggactacaagcggctgaacgtcctccgcaagaagtttcgctccgtc
cccatgatggctctgacagccactgccaaccccagggtacagaaggacatccagaaccag
ctggagatgctaaagccacaagtgtttacaatgagcttcaacaggcataacttgaaatat
gatgtgctgcccaagaagccaaagaaggtggcaatggattgcttggaatggatcaaaaaa
tatcatccacatgactctggaataatttattgcctctcacgtcatgagtgtgacacaaca
gcagctatcctgcagaaggaaggtctggctgcccttgcctaccatgctggcctcactgac
tccaacagagatctggtgcagaagaagtggattaatcaagaaggatgtcaggttatatgt
gccaccattgcctttggaatgggaattgacaagcctgacgtgcgctacgtgatccacgct
tcccttcccaaatccatagagggctactaccaggagtctggcagagctgggagagatggg
gagatgtcccactgcctgctcttctacagctacagtgatgtcaccaggctcagaaggtta
ataatgatggagaaagatgggaacagtcacagcagacagactcacttcaacaacctctac
agcatggttcactactgtgagaacgtggtggactgcaggaggatccagcttttggcctac
tttggggaaacaaactttaatcccaccttctgcaaagatcacccagaggtcatctgtgat
aactgcagtaggaagaaggattacagatcaagaaatgtaacagaggaggtgaagagcatc
gtcaggtttgtgcaggagcactgcgggcaaggacgacgagggagcgagaggaaacacacg
gggtctgggaggtacacactgaacatgatggtggacatcttcctgggtaaaaccagtgcc
aagattcagtctggaatatttgggaagggagctgcctactccaggcataatggtgagagg
cttttcagaaaactggtcctggacaagatcctggatgaagatttgtacatcacagctaat
gaccaggcagtggcctatgtgatcctaggagagagagctcaggctgtgctagatggagca
ctgcaggtggagttccacgagacagaaagtgccagtgacatcagaaagcagagagcttcc
atggcaaagatgtcccagcgggaggagatggtcaaaaagtgccttggggaacttacagac
acctgcaaaacgcttgggaaggtctttgatgtgcactacttcaacattttcagtacttca
actctgaagaaaatagcagagaccctgtcctcagatgtggaggttttactgcagattgat
ggggtcacagaagacaaactggaaaaatatggtgcagagataattaaagtgatggagaag
tactcagagtggaccacaccagaagaaactccctgccccagcgtggacacggccacagga
agccagggcacctctgagggcgatgaggaagctgaaggtggggctacaacttccagctac
ttttccaataatgcaaaccaaagaaggaaaaggaaaaggccaccaaacttcagagaatcc
aagaggaaaaagaccagtaatggtggcagccagcagttccgtcccagaggctacagcaag
caccgaaggaccaaaaagccatttggctccaaggctccagctgcttctggcggcagctca
gtgtcctacagcgtcggtgccacccaaggagctgctggaaagctggggatcatggcacca
cccaaacccaaagccaggcacttccttcagccttcatactcagtcttctga
DBGET
integrated database retrieval system
