Dryobates pubescens (Downy woodpecker): 104297419
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Entry
104297419 CDS
T08526
Symbol
TUBGCP6
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104297419 (TUBGCP6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpub04812
]
104297419 (TUBGCP6)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
104297419 (TUBGCP6)
Cytoskeleton proteins [BR:
dpub04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
104297419 (TUBGCP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
104297419
NCBI-ProteinID:
XP_009895647
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MESITQLFNDLCEAHLTGLPWKVHLGRQKISKRMAKQSLKKVAYNALFLNLFQDEARKLQ
SNISRLPVKNKILMLSFNLRVGGLGAQADRLENLVEELETAECLPFTEVNSVLDLLVQLA
GTGPPQLVPQKKDYFLNNKYVGRNVKYQGYDYYDVSVFEADIQSLITNEECLFDDTIQKT
LQIMEAAPGTGLPAIGLFSQSYPAGDKFERETRVSLFGALVHSRTYDMDIRLDLPPVPDN
ADLSGLAIKVPQSIDQSEDEGFQSASNLTPDSQSEPSITPDIDLWDAVLTYGPSKRRCWE
RIGYPPGKKEEPYLTEAGREAFDKFYSLREGQLQLVSDTVLQLPQLVLMKEPELVKDVLN
VLIGVVSTTFSLNQAAQSFVIKEGVYVSGTSPEAMHNLLSEVAEYGTHYTRLSRFSLQPV
IDSSYSKGLVFQAFTSGLRKYLQYYRACVLSTPPTLSLLTISFLFRKLGRQLRYLAELCG
IGTTTLGISGGAGAAFPTGVKLLSYLYKEALNNCSNEHYPVLLSLLKTSCEPYTRFIYDW
VYSGVFRDVYGEFMIQVNEDYLCFRDKHYWTHGYVLISKEVEDCVPVFLKHIANDVYICG
KTINLLKLCCPRHYICWSDIPVPRISVIFSIEELKEIERDCAVYVGRMERIARYSSISKE
EKDLRMEIAKQELIVHARETASRVLKAINDRQVSERMALDAKKREQFQKLKEQFTKDQER
RLAIKQEEIDDDFSFARELREREKRLKALEEELEKKARQELIDHYSKLSDDAARREQRAL
WKIQRHKLETARLKFLLEDQKRIEEMLEKLPDGNYRRKLDIIPYKECQLALDEKPVVKDP
HSQMSSLKPLHSYETDGRKESEPGLQHAASADKALPMPWPTNNNADQHLQPKAAGSESSL
QVSEKAFSPLCSADSLPESCVNIEDFLLKPQDEQPVAVSVQGSSLDEAFQNINSDLSETP
QISENQPVLRGALEGDSAPLQQQNEYDFNTVLRPSAACQGHVQVGENVFDVEYRRPRWNI
HGHASDASIRVGEYVPHADTYQPRSSPYGHSSDSHIETSSFISEVESSRPRWNIHGHISE
GHIKIGEYASEVEPSRPRWNIHGHASEANIKIGEYVSNVAPTRPXWNIHGHASDANIKIG
ENVSEVVSARPRWNIHGHASQSHIKIGELVSETEPLKSRWSPFGHASQSSIQIGEWAPST
ENDPIPHRRTISGPSSDSTVQTLLYSEELSPAEGSRKEAKTSQAEEKSSPQAESSDSVPV
FPDANIKGDKKENTMEEKREVIANEVNKDPSPDSSQNLQVEEPEKTVTVDPVPPKAKEEE
GEEEDAWKKEQAYLKALSDQYCIEKYQDSYDLMSELPVSHLLHHVIPRSYTFPVDPVVQS
ATDETAVQLSELLSLPVLMKRSITAPLVSHVSLVNKAIVDYYFVELNVEKHFEALRHFLL
MEDGEFAQSLSDLLFEKLGSGQTPGELLNPLVLNSILNKALQYSLHGDTQLASNLSFALK
FLPEVFQPNAPDALSCLELRYKVDWPLNIVITESCMNKYNKIFSFLLQLKHMVWTLKDIW
FHLKRTALVSHASNSVQFRQLQLYKHEMQHFVKVIQGYIANQILHVTWCEFGNKLSSVGN
LEEIHRTHAEYLNKAIFRGLLTEKAAPVMNIIHSIFSLILKFRSQLISQSWSFDAGKQMA
VHPNFGLMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDN
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggagagtatcacacagttgttcaatgatttgtgtgaagctcacttgacaggtttgcca
tggaaggtccacctaggcaggcagaagatcagcaagagaatggctaagcaaagtctgaaa
aaggttgcttataatgccctatttttaaacctttttcaagatgaggctcgtaagctacag
tcaaacatttccaggcttccagtgaaaaacaaaattttgatgctgtctttcaatttgaga
gttggtggcctgggtgctcaagcggatagactggagaaccttgtggaggaactggaaaca
gctgaatgcttaccatttactgaagttaattctgtcttggatctcttagtacagcttgct
ggaacaggtcctcctcagcttgtaccacagaaaaaggactattttctgaacaacaaatat
gttggaagaaacgtcaaatatcagggttatgattattatgatgtaagcgtgtttgaagct
gatatacaatctctgataacaaacgaagaatgcctgttcgatgacacaattcaaaagaca
ctgcagataatggaggctgcacctggcactggactccctgccatagggttgttctctcag
agctatcctgctggtgacaagtttgagagagaaacacgggtctcactcttcggtgctctt
gtccatagccgtacatatgatatggacatcaggttggacttgccaccggtgcctgacaat
gcagatttgtctggacttgccattaaagttcctcaaagtatagaccagtcagaagatgag
ggattccagtcagcatccaatctgactcctgattctcagtcagagccaagcataactcca
gatatagacctgtgggatgcagtgcttacgtatggacccagcaaacggaggtgttgggaa
agaattggatacccacctggtaagaaagaggaaccataccttactgaagctgggagggaa
gcttttgacaaattttacagtcttcgagaagggcaattgcagctggttagtgacactgtc
cttcagcttccacagcttgtgctgatgaaagaacctgaactggtgaaggacgtcttgaat
gtcctcattggtgtggtatccactacattttcactcaatcaggctgctcagtcatttgtg
ataaaggagggggtatatgtatctgggacttcaccagaggcaatgcacaacctgctctca
gaagttgcagagtatggaacccattacacacgactaagtcgtttttcccttcagccagtt
atagattcttcatacagcaaaggacttgtgtttcaggcattcacaagtggactgagaaag
tatcttcaatattaccgagcctgtgttttgtcaacacctcctactttaagtcttctaaca
atcagctttctcttcagaaaactaggtcgtcagttgaggtatttagctgaactttgtggc
ataggaacaacaactctggggatcagcggtggagctggtgctgcatttcctacaggtgtt
aaattgctttcgtacctgtacaaagaggctctcaacaactgtagcaacgagcattaccca
gttcttctgtctttgttgaagacaagctgtgagccatacacaagatttatctatgattgg
gtatacagtggtgtgttcagagatgtttatggagaatttatgatccaagtgaatgaggat
tatctttgtttcagagataaacattactggacccatggttatgttttgatttcaaaagaa
gtagaagattgtgtgcccgtatttcttaaacatattgctaatgatgtatatatatgtggg
aaaaccataaacctactgaaattgtgctgtcctaggcactatatatgttggtctgatata
cctgttccccggatttcagtcattttttcaatagaggagctcaaagaaatagagagagat
tgtgcagtgtatgtaggtcgaatggagaggattgcccgatacagttccataagcaaggag
gaaaaggatttgcgcatggaaatagccaaacaagaattaattgttcatgctcgagaaact
gctagcagggtactaaaagccattaatgatcgacaggtatcagaacggatggctttggat
gcaaagaaacgggaacagtttcagaagctgaaagagcaatttacaaaagaccaagagcgt
cgccttgcaataaagcaagaggagattgatgatgatttcagctttgctcgagagctcaga
gagagagagaaaagactgaaagctttagaagaagaactggaaaaaaaggcaaggcaggaa
ttaattgaccattatagcaaactttctgacgatgcagcccgtagggagcaaagagcgtta
tggaaaatccagcggcacaagttggaaacagctcgactgaagtttctattagaagatcaa
aaacgcatcgaggaaatgcttgaaaaacttccagatggaaactacaggagaaaattagat
attattccttataaagagtgccagttggctttagatgaaaaacctgttgtgaaagatcca
cattcacagatgtcttctctgaaacctctgcattcgtatgagacagatggcagaaaagaa
tctgagcctggactgcaacatgctgcttctgctgacaaagcattgcccatgccctggcca
acaaataataatgctgatcagcatcttcagcccaaagctgcaggatctgaaagcagtctc
caggtttctgagaaagcattcagtcctctgtgcagtgctgattccttgcctgaatcctgt
gttaatatagaagatttcttactgaagccacaagatgagcagcctgttgctgtcagtgta
caaggatcatcgctagatgaagcattccaaaacattaattcagatctttctgagactcct
caaataagtgaaaatcagcctgtcttgagaggagcgctggaaggagacagtgcaccattg
cagcagcaaaatgagtatgattttaatacagttctcaggccatctgcagcttgtcaggga
catgttcaagttggagaaaacgtatttgatgtggagtacagaaggcctcggtggaatatt
catggacatgcatctgatgccagcattagagtgggagaatatgtacctcatgcggacact
taccagccacgatcaagtccttatgggcattcttcagactcccatatagaaaccagcagc
tttatttctgaagttgaatctagccgaccccgatggaatattcatgggcatatttctgaa
ggtcatattaaaattggggaatatgcttcagaggtagagccttcaaggcctaggtggaac
attcatgggcatgcttcggaagccaacattaagattggagagtatgtgtcaaatgtagct
cctacaaggccttgatggaacatccatggtcatgcgtctgatgccaatatcaagattggt
gaaaatgtgtcagaggtggtgtcagctagaccccgttggaacatccatggacatgcttca
cagtcacacatcaaaattggagaactggtttcagagacagagcctttgaaatctcgttgg
agcccatttggtcacgcatcccagtcaagcatccaaataggggagtgggccccatcaaca
gagaatgatccaatacctcatcgtagaaccatttcaggtccttcatctgactccacagtt
cagacacttctgtacagtgaagagttatctccggctgaagggagcagaaaggaagcaaaa
acctcacaagctgaggaaaagtcttcaccacaggcagaatcatctgacagtgttccagtc
tttcctgatgctaatattaaaggtgacaaaaaagaaaatacaatggaagagaagcgagaa
gtaattgcaaatgaggtcaacaaggacccttctccagattcctcacagaacttacaggtg
gaagaacctgaaaaaacagttacagtggatcctgtgcctcccaaggctaaggaggaggaa
ggggaagaggaagatgcatggaagaaagaacaagcttatttgaaagccttgtcagaccag
tactgtattgaaaaatatcaagatagttatgatttaatgtcagaactaccagtttctcat
ctcttgcatcatgtgataccaagatcctacacttttcccgtggatcctgtggtacaatca
gcaacagatgaaacggctgtacagctgagtgagctcttgtctctgccagtgctgatgaaa
cgttctattactgctccacttgtatctcatgtttctcttgtgaacaaagcaatagttgat
tactactttgtggaactgaatgtagagaagcattttgaagcactgagacattttttgtta
atggaagatggggagttcgctcagtcgctcagtgacctgctatttgaaaagcttggatca
ggacagacacctggtgaactgctgaatccactggttcttaattccatcctaaataaagca
ttacagtacagtcttcacggtgacacccagcttgcttccaatctttcttttgccctcaag
tttcttccagaagtgttccagcccaatgcacctgatgctctgagttgcttagagctgagg
tacaaggttgactggcctctgaacattgtcattaccgagagctgcatgaataaatataac
aagatcttctccttcttgctgcagctgaagcacatggtgtggactctcaaggatatttgg
tttcacttaaaacgcactgctttagtgagtcacgcatcaaattccgttcagtttcgacag
ctccagctgtataaacatgaaatgcagcatttcgtgaaagttattcaaggttacattgct
aatcagattcttcacgttacgtggtgtgaatttggaaacaaactgtcttcagtaggcaac
ctggaagaaattcacagaacgcatgctgagtacctcaacaaagcaatcttcaggggtctg
ttgacagagaaggcagcccctgtgatgaacatcatacatagcatcttcagccttatcttg
aagttccgcagccagctgatctctcagtcatggagctttgatgcaggcaagcagatggct
gttcatcccaactttggtctgatgcagcagtcatacaataccttcaagtattactcccac
ttcttattcaaagtggtaacaaagcttgtaaatagaggataccagccacacctggaggac
tttctactgcgcatcaacttcaataactactacaaggataactga
DBGET
integrated database retrieval system
