Dryobates pubescens (Downy woodpecker): 104297431
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Entry
104297431 CDS
T08526
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03420
Nucleotide excision repair
dpub04115
p53 signaling pathway
dpub04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104297431 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
104297431 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
104297431 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104297431 (DDB2)
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104297431 (DDB2)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104297431 (DDB2)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104297431 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
PEP5_VPS11_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
104297431
NCBI-ProteinID:
XP_009895661
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAPVNQPKDKKHEKTLEHWTEEAKSSGKRKLDYEELGNEPQAKRLFVRKTSKPPEKTGWS
GGRSMVKNNRVLFHQLGRQCSIVHYLYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLEGRAVQVISRVLDCGHEYHNVCCWYCSVDVSANCRAVVTGD
NVGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKTN
FLHLLPHDKPVNAAYFSPTDGAKLLSTDQRNEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRHRGQRQANPGTS
KLKANLLSWELEETRTKSNDSKSQGKKRKGKDLEN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggataaaaagcatgagaagacgcttgagcactggacg
gaagaagcaaaatcatctgggaagaggaaactggactatgaggagctagggaatgagcca
caagcaaaaagattgtttgtgagaaaaacatccaaacccccagagaaaacgggttggagt
ggaggtaggtccatggtgaaaaacaacagagtccttttccatcagctggggcggcagtgc
agcattgttcattatctctaccagaacatgctgggaggttccattcgggcacagctcagg
cagtgtctgcagctgccctttctgcgctctctagcctcgtaccgcctgtttcgaacagca
agtccctttgacaggagagtgacatgtctggaatggcatccaacacaccccagtactgta
gcagttggttccaaaggtggagacatcatcctgtgggattatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctctcggagacatcaagttcagtccctat
gaggctgtgaagctttatgtggcatcaggggatggcaccctaagtctgcaggaccttgag
ggcagagcagtgcaggtcatctcccgtgtcttggactgtggccatgagtaccataatgtt
tgttgctggtactgcagtgttgatgtttctgcaaactgccgtgcggtggtgacaggagat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagagatatggaagctgaaattg
cacaggaagaaagtgactcatgtggagtttaactcccggtgtgagtggctgttggccact
gcatctgtggatcagacagtcaaaatctgggacctcagaaacattaaaaacaaaacaaat
tttcttcatctgcttcctcatgacaaacctgtcaatgcagcttacttcagcccaacagat
ggtgccaaactcctgagcacagaccagcgcaatgaaattagggtttactcatcttcagat
tggaccaagccacagcatctgatcccacatccacatcggcagtttcagcacctcacacct
attaaggcaacatggcatcctcgctatgacctcattgtagcaggtcgctacccagacccc
aagttcccaggctacacggtgaatgagctgcgaactgtggatgtgtttgatggaaacacc
ggggagatggtttgccagctccacgatccaaacgcttctggtatcatctcgctcaacaaa
tttaaccccatgggagacacgctggcttctggcatgggttttaatattctgatctggagc
cgggaggagatggtggccaagaaacaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacacagagggcaaaggcaagcaaaccctgggacaagc
aaactcaaagctaacctactgtcttgggagctggaggagacaagaacaaaaagcaacgat
tctaaatcacagggaaagaagcgaaaagggaaggatctagagaactga
DBGET
integrated database retrieval system
