Dryobates pubescens (Downy woodpecker): 104297441
Help
Entry
104297441 CDS
T08526
Symbol
AMBRA1
Name
(RefSeq) LOW QUALITY PROTEIN: activating molecule in BECN1-regulated autophagy protein 1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04137
Mitophagy - animal
dpub04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104297441 (AMBRA1)
04137 Mitophagy - animal
104297441 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104297441 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104297441 (AMBRA1)
Membrane trafficking [BR:
dpub04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
104297441 (AMBRA1)
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
104297441 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_2nd
PRIMA1
TAZ1_RBM
Motif
Other DBs
NCBI-GeneID:
104297441
NCBI-ProteinID:
XP_009895677
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEISVDSTEMPHYRQRAILPSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQNNVQDSATPSPPPPPPPPPPPPASENTRASVYNRLRERVSY
PTAECCQHLGMLCLCSRCSSARLPSSLFPHQENAPSTSSGATGTSFSSVQTEPYQPPEQA
SVAQEEQGILNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLSGPLAGHQSRYQQSAREMAS
GLGGSDWSRTVLNMSSRSELEAMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGF
LAPGAEADSGGSAGPSNPASIRNELQCDLRRFFLEYDRLQELDQGIGGEPSQSQQAQEML
NNNIEPDRPGPSHQQTPHSSENNSTLSRGLNRCRACHNLLTFNNDTLRWERSTPSYTPGQ
VQSTFEGVPPNTSQVQPAERTEGRAPASSRLQLGSSSTPQEERTVGVVFNQETGHXKVYS
QSASSRPGNVSQEALNQEMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPAR
LSPAAYYAQRMIQYLSRRDSIRQRSMRYQQTRLRSPSSSSTSESSSPAVEGNELEFEDFE
DNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLA
GAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISAD
GQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGL
ASRRILLHPSTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEP
GLGLAYGTNKGDLVICRPEALNSGIEYHWDQLNENVFAVHSSSRSAERPGTSRATWRTDR
DMGLMNAIGLQPRNPPTSVTSQGTQTLLPQLQNAXXXSAGTGEGEGPDYGGSGEDALSRI
QRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGAESTLAEGTSAQQSTS
QQLAAELEGRILSESMQVSEHGLSPRTAPGGNEGHGAGDLGLPEQAQSSMDTEGPIEYSD
LTNNNHLPDSTNFYNNDSTSGESRNR
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaccggagaagaatgctgtccgcatcctgtggggtagggaacgtggcacc
caggccttgggcgctcagcggctcctgcaggagttggtggaggataaaactcgatggatg
aaatgggagggcaagaaagttgagttgccagacagtccacgctccaccttcttgctggcc
ttcagtccagacaggactttaatggcttccacacacgtgaaccacaacatctacatcacg
gaggtaaaaacgggcaagtgcgttcattccttggtcggacatcgccgcactccctggtgt
gtcaccttccatcccactatcccaggcctcattgcttcaggatgcctagatggggaggtt
agaatttgggatttacacggcggaagtgagagctggttcacagacagcaacaacgccatc
gcatcgctcgctttccatcctacggctcagctcctgctgatcgccactgccaatgagatt
cacttctgggactggagccgccgggagccctttgcagtggtgaaaacggccagtgaaatg
gagcgggtcaggctggtacggtttgatcccttgggacactacttgctcacagcgattgtt
aacccttctaaccagcagagtgatgaggaagtggaaatctccgtggacagcaccgagatg
ccgcactatcgccagcgtgccatccttccgtctcagcccgtgaggcgcacacccctcctc
cacaacttcctgcatatgttgtcctcccgctcctcgggcatacaggtgggagagcaaaac
aatgttcaagactctgctaccccatcccctccaccgcctccaccaccaccacctccgcct
ccagccagtgagaacacaagggcatctgtgtataacaggctccgggagcgtgtcagctat
cccacagcagagtgctgccagcacctggggatgttgtgcctttgcagccgatgctctagt
gcaagacttccttcttctctcttcccacaccaggagaacgcgccctccacgtcttctggg
gccactggcacttccttctcctctgtgcagacagagccttaccagcccccagagcaggca
tccgtagcgcaggaggagcaggggatacttaacaggccctctgctttcagcacagttcag
agcagcactgctggcaacaccctacgcaaccttagcctgggccccacgcggaggtccctc
agcgggcccttggcaggccaccagtcccggtaccaacagtctgcaagagaaatggcttcg
ggcttaggtgggtctgactggtccaggacagtgttgaacatgagctctcggtcagagctg
gaagccatgcctccccctaggaccagtgcctcctccgtgagcttgctgtcggtgctgaga
cagcaggagggaggttcccaggcatcggtctatacctctgcaacggaagggaggggcttc
ctggccccaggggctgaggcggacagtggtggtagcgctggcccgagcaatccggccagc
atccgtaatgagctccagtgtgatttgaggcgattcttcctggaatatgaccggcttcag
gagttagatcaggggattggtggggagcccagccagtcgcagcaggctcaagaaatgctc
aacaacaacattgagcctgatcggccgggtccctcccatcagcaaactccacacagcagt
gaaaacaattccactttgtcccgggggctgaaccgctgtcgcgcttgtcataacctgctg
acctttaacaatgacacgctgcgctgggagagaagcacgcctagctacacaccagggcag
gtccaaagcacgtttgagggtgtgcctccaaataccagccaggtgcagcctgcagagaga
accgagggcagagctcctgcctctagcaggctgcagctgggcagctcttccaccccgcag
gaggagaggaccgtgggagtggtctttaaccaggagacggggcactaaaaagtttacagc
cagtcggcttcaagcagacctgggaatgtatcacaggaggccttaaaccaggaaatgcct
gaggaaagctcagaggaggattcactcaggaggaggttgttggagtcttccctcatttca
ttatctcgctacgatggagcagggtcccgggaacatccgatctacccagatccagccagg
ttgtctcctgctgcatattatgctcagaggatgatccagtacctctcccggagggacagt
attcggcagcgctcgatgcggtaccaacaaacccgtctccgctctccctcctcctcttcc
acttcagagagctccagcccagccgtggaaggaaatgagctggaatttgaagattttgag
gacaatggagaccgatccaggcaccgagctccccggaacgcccgcatgtctgcaccgtcg
ctgggacgctttgtccccagacgcttcctgctgccagagtacttgccttatgctgggatt
ttccacgagcggggacagcctggcttggccacccattcctctgtcaacagggttttggca
ggtgctgtgattggggatggccaatcagccgtggccagcaacattgccaacaccacctac
cgactccagtggtgggacttcactaaatttgatctgcctgaaatcagcaatgcctctgtg
aacgtcctcgttcagaactgcaagatttacaacgacgccagctgcgatatctctgctgac
gggcagctgctggcagctttcattcccagcagtcaaagaggcttccctgatgaaggaata
ctggctgtgtattctttggcacctcacaacttgggcgagatgctttacacaaagcggttt
ggccctaatgccatttctgtcagcctgtctccaatgggcaggtatgtcatggtgggactg
gcttcccgacgtatcctcctgcacccctccacggaacacatggttgctcaagtcttcagg
ctgcaacagccccacggtggagaaacctctatgaggagagttttcaacgtcctgtaccca
atgcctgccgaccagagaagacatgtcagcatcaactctgctcgctggctgcctgagccc
ggcctgggactggcctacggcaccaacaaaggggacctggtgatttgccgaccagaggct
ttaaactccgggattgagtaccactgggaccagctgaatgagaacgtcttcgctgtgcat
tccagcagcaggagcgcggagcggcccggaaccagcagagccacgtggaggacagacagg
gacatgggcctgatgaatgccataggcctgcaaccccgcaaccccccaacctctgtaact
tcccagggcacccagaccctgctgcctcagctgcagaatgcnnnnnnnnnntctgcaggg
actggggaaggtgaaggtccagactatgggggcagcggggaggatgccctgagtaggatc
cagaggctgatggcagaaggtgggatgactgccgtggtccagcgggagcagagcaccacc
atggcgtccatgggcggctttggcaacaacatcatcgtgagccaccggatccaccggagc
tctcagactggcgcagagtccaccctagctgagggcacgtcggcacagcagtccacctcg
cagcagctggcggctgagctggagggacggatcctttccgagtctatgcaggtgtcagag
catggcctgagcccgcggacagcccctggtgggaatgaaggacacggcgctggtgatctg
ggcctgccagagcaggcccagtcctccatggacactgagggaccaattgaatatagtgac
ctaactaataataaccatcttcctgacagtaccaacttctataataatgacagcaccagt
ggggagtcgcggaacaggtag
DBGET
integrated database retrieval system
