Dryobates pubescens (Downy woodpecker): 104297550
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Entry
104297550 CDS
T08526
Symbol
DTX4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104297550 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104297550 (DTX4)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104297550 (DTX4)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104297550 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-C3HC4_2
zf-RING_11
zf-RING_Vps41
zf-C3HC4_4
zf-UDP
zf-RING_16
PHD_NSD
WWE_5
PHD
zf_RING_Vps8_fungal
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
104297550
NCBI-ProteinID:
XP_009895790
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
AGPRAGGGVVLGQADSRLAPYIIDLQSMHQFRQDTGTIRPVRRSYYDPSSAPGKGVVWEW
ENDSGSWTPYDMDVGITIQRAYEKQHPWVDLSAIGFCYVIDFATMGQINPASTPALSLAS
SAASPPGAGSAKASRPALSTLNRSHLQRLAIAQSRVLIASGVPTVPVKNLTGSSPVNPAL
AGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIQSIPGISHTCRKTTKKQAKKGKTPE
EVLKKYLQKVRHPLDEDCTICMERLSAPSGYKGPQPTVKPDLVGKLVKCGHIFHLHCLVA
MYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHIIPHALPGHSECKTIRIIYNIPPGV
QGPEHPNPGKSFTARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTGESDTV
IWNEIHHKTEFGSNLTGHGYPDINYLDNVLAELAAQGITEESLAQEKD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gccggcccgcgggcggggggcggcgtggtgctgggccaggccgacagccgcctggcgccg
tacatcatcgacctgcagtccatgcaccagttccgccaggacaccggcaccatccgcccg
gtccggcgcagctactatgacccctcgtcggcgccaggcaagggagtggtgtgggagtgg
gagaacgacagcggctcctggacgccctacgacatggacgtgggcatcaccatccagcgc
gcctacgagaagcagcacccctgggtggacctgagcgccatcggcttctgctacgtcatc
gacttcgccaccatgggccagatcaacccggccagcactcccgccctgagcttggccagc
tccgccgccagcccccctggtgcgggcagtgccaaggcctcccgtcctgccctgagcacc
ctgaaccgcagccacctccagcgcctggccatcgcccagtcccgggtgctgattgcttct
ggggtccccaccgtccccgtgaagaacctcactggctccagcccggtcaacccagcgctg
gcagggatcaccgggatcctgatgagcgcggccgggctgcccgtgtgcctgacccggccc
cccaagctggtgctgcaccccccgcccgtcagcaagagcgagatccagtccatccctggc
atctcccacacctgccgcaagaccacaaagaagcaggccaagaagggtaaaaccccggag
gaggtgctgaagaaatacctgcagaaggtgcggcaccccctggatgaggactgcaccatc
tgcatggagcgcctctctgcaccctctggctacaagggaccccagcccaccgtcaagcct
gacctggtggggaagctggtgaagtgtggacacatcttccacctccactgcttggtcgcc
atgtacaacaacggcaacaaggatggaagcctgcagtgtcccacctgtaaaaccatctat
ggggtgaagacagggacgcagcccccggggaagatggagtaccacatcatccctcatgcc
ctgcctggccactccgagtgcaaaaccattcgcatcatctacaacatccccccgggggtg
cagggaccagagcatccaaaccctgggaagagcttcaccgcccgcggctttccccggcac
tgctacctgccagacagcgagaagggcagaaaggtactgaagctgctgctggtggcctgg
gaccgacgcttgatctttgccattgggacctccagcaccacaggcgagtcggacacggtg
atctggaacgagatccaccacaagacagagtttggatccaacctcaccggccatggctac
cctgacatcaactatctggacaatgtcctcgctgagcttgcagcccagggcatcacagag
gagagcctggcgcaggagaaggactga
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