Dryobates pubescens (Downy woodpecker): 104297599
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Entry
104297599 CDS
T08526
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104297599 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104297599 (CNGB1)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104297599 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
COQ9
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104297599
NCBI-ProteinID:
XP_009895846
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MLAWIHRVVPQPPLPHATEKTSPAPVQDPQPPKAPRGKAAGTEDAADHTRAKEVQILKEE
DEDALEITPFDAEEEEEEAEEESEAGPAGGTEEWWFNWYTRRAVLTAIYSTSELVMLQDS
SQDFQDTWHFLESRVADAMSMSSTAEQHVCLVCPGGAEGDATASAQEEAGHTVHIVPGGP
EEEPELALEELDDGWVNEATAERVAWGCELVADAHPLPPIQEEPQEEGNRPLGQSLAPTT
REGVEEVCCAEEALRSEQLEEAAGISDPEGALVQVEEGRAEAAGAGAEAVVLLHGPGSDP
SVDAVESDAVEKDGTHLLLPTSHASSMLAVPSMAPASPSLPERVGSATSTSSALINSRLQ
ELVKLFKERTEKVKEKLADPDVTSDEESPVASPAKAAPAAAPPPPPPPGGAPGGDKAAGA
EHYCQMLCCTFKHPPWLQRLRSYRFPSSIDPLTNLMYVLWLFFVVLAWNWNCWLIPVRWA
FPYQTPANIHLWLLMDYLCDLIYLLDIIIFQTRLQFVQGGDIITEKKAMKENYLRSQRFK
MDVLSLLPLDFFYFKVGVNPLLRLPRCLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLL
YSLHVNSCLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEII
FQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNSYRIPRAIQNRVKT
WYEYTWHSQGMLDETELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLR
SVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPEGTTVLVTLKAGSVFGEI
NT seq
2498 nt
NT seq
+upstream
nt +downstream
nt
atgctggcctggatccaccgggtggttccccagcccccgctgccccatgccacagagaag
acctccccagctccagtgcaggacccacagccacctaaggcaccaagaggaaaggctgca
ggcactgaggatgctgctgatcacacaagagccaaagaggtccagatcctgaaagaggag
gatgaggatgctctggagataactccctttgatgcagaggaggaggaggaggaagcagag
gaggagtctgaggctgggccagctggcggcacagaggagtggtggttcaactggtacacg
aggagggcagtgctcactgccatctacagcacctcagagctggtgatgctgcaggactcc
tcccaggacttccaggacacttggcacttcctggagagcagagtggctgatgccatgagc
atgagcagcacagctgagcagcatgtttgcctggtttgcccagggggtgcagaaggtgat
gccacagccagtgcccaggaagaagcaggacacacagttcacattgtccctggggggcct
gaggaggagcctgagctcgccctggaagagctggatgatggctgggtcaatgaagccacg
gctgagagggtggcctggggttgtgagctggtggcagatgctcaccccctgccccccatc
caggaggaacctcaggaagagggaaacaggcccctgggccagtcgctggctcccaccacc
agggagggtgtggaggaagtctgctgtgcagaggaggccctcaggagtgagcagctggaa
gaagcagctgggataagtgatcctgaaggtgctcttgtccaggtggaggaggggagagct
gaagctgccggagccggtgctgaagctgttgtccttctgcacgggccaggcagtgacccc
tccgtggacgccgtggagagcgatgctgtggagaaggatggcacccacctcctgctgccc
accagccatgcttccagcatgttggcagtgcccagcatggcaccagcatcccccagcctc
cccgagcgcgtcggctcagccaccagcaccagcagcgccctcatcaacagccggctccag
gagctggtgaagctcttcaaggagaggactgagaaggtgaaggagaagctggctgaccct
gatgtcacctcagatgaggagagccctgtggcatccccagccaaagcagcgcctgcagcg
gcgccgccgccgccccctcccccaggaggggctccggggggggacaaagcagcaggagct
gagcactactgccagatgctgtgctgcaccttcaagcacccaccctggctgcagcgcctg
aggagctaccggttccccagcagcatcgaccctctcaccaatctgatgtatgtcctgtgg
ctcttcttcgtggtcctggcctggaactggaactgctggctgatccctgtccgctgggct
ttcccttaccagaccccagcaaacatccacctctggctgctcatggactacctctgtgac
ctcatctatctgctggacatcatcatcttccagactcgactgcagtttgtccaaggagga
gacataatcacagagaagaaggccatgaaagagaactacctgagatcgcagcgcttcaag
atggatgtcctctccctcctgcccctggatttcttctacttcaaagtgggagtcaaccct
ctcctgcgcctccctcgctgtctgaagtacatggccttcttcgagttcaacaaccgtctg
gaggctatcctgagcaaggcctacatctacagggtgattaggaccactgcctacctgctg
tacagcctgcatgtcaactcctgcctctactactgggcatcagcctacgaggggctgggc
tccaccacctgggtctatgatggagaaggaaacagctacatccgctgctactactgggca
gtcaaaaccctgatcaccatcgggggcctgccagaccccaagaccctctttgagatcatc
ttccagctgctcaactacttcacaggggtctttgccttctctgtcatgatagggcagatg
agggacgtggtgggcgccgccaccgccggccagacctactaccggagctgcatggacagc
accatcaagtacatgaactcctacaggatccccagggccatccagaacagggtcaaaacc
tggtatgagtacacatggcactcccaaggcatgctagatgagacagagctgctggtgcag
ctgccagacaagatgaggctggacattgccatcgatgtgaactacaacattgtgagcaag
gtggccctcttccagggctgtgacaggcagatgatctttgacatgctgaagaggctcagg
tccgtggtctacctgcctaacgactatgtctgtaagaagggggaaattggccgtgagatg
tacatcatccaggcaggacaagtgcaggtcctggggggacctgagggcacaacagtgctg
gtgactctgaaggctggatctgtgtttggggagatcag
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