Dryobates pubescens (Downy woodpecker): 104297655
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Entry
104297655 CDS
T08526
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04120
Ubiquitin mediated proteolysis
dpub04137
Mitophagy - animal
dpub04144
Endocytosis
dpub04340
Hedgehog signaling pathway
dpub04350
TGF-beta signaling pathway
dpub04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104297655 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104297655 (SMURF1)
04350 TGF-beta signaling pathway
104297655 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104297655 (SMURF1)
04137 Mitophagy - animal
104297655 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
104297655 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104297655 (SMURF1)
04121 Ubiquitin system [BR:
dpub04121
]
104297655 (SMURF1)
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104297655 (SMURF1)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104297655 (SMURF1)
Membrane trafficking [BR:
dpub04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104297655 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
104297655 (SMURF1)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
HECT type E3
104297655 (SMURF1)
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104297655 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
104297655
NCBI-ProteinID:
XP_009895926
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MSVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSI
TISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVS
LQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSYFMEEPAPYTDTTGAAGGGNCRF
VESPSQDQRLQAQRLRTPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQT
GVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIM
NHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRI
EVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYG
LFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGK
PIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTE
ENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLN
DWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAAGP
RLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtattatgtgccaagaaccttgcaaagaaagatttcttcagacttcctgacccc
tttgcaaaaatagttgttgatgggtcaggccagtgccattccactgacactgtgaagaac
acattggaccccaaatggaaccagcattacgatctctacgttgggaagacagattccata
accatcagtgtctggaaccataaaaaaatccacaagaaacagggagctggcttcctgggg
tgtgtccgactcctctctaatgccatcagcaggctaaaagatactggataccagcgtttg
gatctatgcaaactaaaccccaccgataccgatgctgtacgaggccaaatcgtggtcagt
ttacagacaagggacagaataggcacaggaggttctgtagtagactgtagagggcttttg
gagaatgaaggaacggtttatgaagattccggaccgggaaggccgctgagctacttcatg
gaagaaccagcaccgtacacagacactacaggggctgctgggggaggaaactgtcgcttt
gtggagtctccaagtcaagatcagaggctgcaggcacagcgactgcggactcctgaagtc
aggggccacgtccagacgcctcagaacaggccacacggccaccagtcgcctgacctacca
gaaggctacgagcaaaggacaacggtacagggccaggtgtattttttgcacacacagact
ggagttagcacatggcatgaccctaggataccaagagaccttaacagtgtgaattgtgat
gagctgggacctttgcctccaggctgggaggtcagaagtacagtttcgggaagaatctat
tttgtagaccacaacaacagaaccacacaattcacagatccacgactacatcacatcatg
aaccatcaatgccagctaaaagagcccagccagcagcctctgccagctccaaacgaggga
tcactagaggatggtgaggagttgcctgcacagagatatgaaagagacttggtacaaaag
ttgaaagttcttagacatgagctctctcttcagcaaccacaggctggccactgtcgcatt
gaagtatccagggaggaaatatttgaggaatcctaccgccagatcatgaagatgagacca
aaggacttgaaaaagaggctgatggtgaaatttcgaggggaggaaggcctggattatgga
ggagtagcaagagaatggttgtatttgctgtgccatgaaatgttgaatccctattatggg
ctcttccagtactccacagataatatttacatgctgcaaatcaatccagactcttctatc
aatcctgaccatttgtcttatttccattttgttggtcggataatgggtttggctgtgttc
catggacactatatcaatgggggcttcacagttcccttttacaaacagcttctggggaag
cccattcagctctctgatctggaatctgttgacccagaattacacaaaagtttagtctgg
atcttagagaacgatatcaccccagttctggaccatacattctgtgtggagcacaatgct
tttgggaggattctgcagcacgagctcaaaccaaacggcaggaatattccagtgacagaa
gagaacaagaaagaatacgtcaggttgtacgtaaactggcggtttatgagaggaatagag
gcacagttcctggctctgcagaaaggctttaatgaactcattcctcaacatctccttaag
ccttttgaccagaaggaacttgagctaatcataggaggcctggataagatagacctgaac
gactggaagtcaaacacacgtctaaagcactgcatggcagatagcaatattgtgaagtgg
ttctggcaagcagtggaaacatttgatgaagaaagaagggcaaggctgctgcagtttgtg
acgggttcgacgcgtgtcccacttcaaggtttcaaggctttacaaggcgctgcaggaccc
agactgtttaccatccatttaatagatgcaaacacagacaaccttcccaaagcccacact
tgctttaaccggatcgacattccgccttacgagtcatacgagaagctttatgagaagctg
ttgacagctgtggaagagacatgtgggtttgctgtggagtga
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