Dryobates pubescens (Downy woodpecker): 104297936
Help
Entry
104297936 CDS
T08526
Symbol
ABCA5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104297936 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpub02000
]
104297936 (ABCA5)
Transporters [BR:
dpub02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
104297936 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_23
AAA_29
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104297936
NCBI-ProteinID:
XP_009896262
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MAPGAPREAGVWRQTRALLFKNCLIKCRTKKSSVQEVLFPLFFLFWLILMSMMHPHRKYD
EVDNINLGSLDTSMLVDFVIGYTPPTQMAREIMKKVAFDNFEEGLITEEYLSEEELQEAS
ALKTSKFVGVVFKDATSYQLRFPDSVVMSSIYTESRASCSNLRKGCESVTYWSSGFTALQ
ACIDAAIIQLKTNQSVWEQLESTRAVVMGEAAVVEIDNFPRAIILIYLVIAFSPFGYYLA
IHIVAEKERKLKEFLKILGLHDTAFWLSWVLLYMSLIFVMSILMAVIATASSLFPQSSAF
VIFLLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFLATLAFGFVGLNIVLLEDFPKSFVW
ILSPLCQCSFLLGIAQVMHLEDYEDGATFSNLTRGPYPLFISLILLVLDSIFYLLVAVYL
DQVIPGEFGLRRTPFFFLKPSFWSKRRKNYKELYESSINGSLSFSEIVEPVPSEFQGKEA
IRISCVQKTFRKKGETVEALRNLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPPTDGF
VSVYGHKVSEIDEMLEVRQITGVCPQSDIHFDILTVEENLSIFAAIKGIPQNDLIQEVQK
VLLDLDMQPIRDNQAKKLSGGQKRRLSVGVAVLGNPKVLLLDEPTAGMDPCSRHIVWNLL
KNRKANHVTVFSTHFMDEADILADRKAVISQGMLKCLGSSLFLKSKWGIGYRLSMHIDAY
CNTEATTSLIRQHIPAASLIQENDEQLVYTLPLKDMDKFAGLFSDLDTHSHLGVITYGVS
MTTLEDVYLKLEVEAEIDQADYSVFNAQQAQDEMDTKSLDDMEQSLLMLSETKAPAMSNA
SLWKKQVSTIAKVHFLSLKRENKCVRVMLLLFLIFLVVQILLFFIHHVIKNSVAAIKLSP
DLYLLKPGEDYHKYRSRLLLQNSTESDINDIVHSLGSMNILLEMFNDSDYVSAAPHSAAL
NVFDLESRQNYVFTLVFNSTMVHSLPVLMNIVSNLLLRNLNVTESIHIWSNPFVQNLPDT
IFRLEIYFEAVLLGIIITGMPPYFAMDNAENHKVNSQVLIQRLQKSFGV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaggagctccaagagaagcaggagtatggagacaaaccagagctctcctcttc
aagaactgtctcattaagtgtaggactaagaaaagcagcgtgcaggaggtccttttccca
ctctttttcttgttttggctcattctgatgagcatgatgcatccacacaggaaatatgat
gaggtggacaacatcaacctgggaagtctggacacctccatgctggttgactttgtcatt
ggatacaccccaccaacacaaatggcacgggaaatcatgaagaaagtggcttttgataac
tttgaagaaggcctcatcacagaggaatatttaagtgaggaggagctgcaagaggctagt
gctttaaaaacctccaaatttgtgggtgttgtcttcaaggatgccacgtcctaccagctg
aggttccctgattcagttgttatgtcttccatttacacagagtcaagagccagctgctcc
aacctgcggaaaggctgtgagtcagtaacctactggagctcaggatttacagctctgcaa
gcctgcatcgatgcagcaattatacagctgaagactaatcaatcagtttgggaacaactg
gaatcgacaagagcagtggtgatgggagaggctgcagtggtggaaatagataattttcct
cgtgccatcattttaatttacctagtgattgctttctcaccttttgggtattatttggca
attcacatcgtggcagaaaaggagaggaagttaaaggagttcttaaaaatactgggactg
catgacactgccttttggctttcttgggtgctgctttacatgagcctgatttttgtcatg
tccattctcatggcggtgatcgcgacggcctcttccctctttccccagagcagtgccttt
gtcatatttctcctttttttcctgtatggactctcttcagtgttctttgcacttatgctg
acacctctatttaaaaagtcaaagcacgtgggtatagtggagttcttggccacactggct
tttggttttgtgggcctgaatattgtcctgctggaagatttcccgaagtcttttgtgtgg
attctcagccccttgtgtcagtgcagcttcctgcttggtatcgcccaggttatgcatcta
gaagattatgaagatggtgcaacgttttcaaatctaactcgtggtccttaccccctcttc
atctctcttattttgctggtgctggatagcatattttatctgctcgtggctgtctacctt
gatcaggttatcccaggggagtttgggctgcgccgcacgccgtttttcttcctgaagccc
tcgttttggtcaaagcgcaggaaaaattacaaggagctgtacgagagcagcatcaatggc
agcttaagtttcagtgagatagtggagcctgtgccttctgaatttcaggggaaagaagct
atcagaatcagctgtgttcagaaaacattcaggaaaaagggggaaactgtggaggctctc
agaaatttatcctttgacatctatgaaggtcagatcacagctctgctcgggcacagcggc
actgggaagacgacgctgatgaatatcctgtgtgggctgtgtcctcctacggatggtttt
gtctctgtctatgggcacaaagtctccgaaatcgatgaaatgcttgaggtgcggcagatc
acaggggtgtgcccccagtctgacatacactttgatatcctcactgtggaggagaacctc
tccatctttgctgcaattaaaggaatccctcagaatgatctgatacaagaggtgcagaaa
gtgttgttggatttggatatgcagcctatcagagacaaccaagctaaaaaattaagtggg
gggcagaagaggaggctctcggtgggagttgctgttcttggaaacccaaaggttctgctg
ctggacgagccaacggccgggatggatccgtgctcacggcacatcgtctggaacctcctg
aagaacaggaaagcaaatcatgtgactgtcttcagcacccacttcatggatgaggcagat
atccttgctgatcgtaaggcagtgatctctcaggggatgttaaaatgccttggatcttct
ctctttctcaagagcaaatggggaattggctaccgcctgagcatgcacatcgatgcctac
tgcaacacagaagccaccacctcactgataaggcagcacatccctgcagccagcctgatc
caggagaatgatgaacagcttgtgtacaccctgccactcaaggacatggacaagtttgca
ggtttgttttctgacctggacactcattcccatttgggagtcatcacctatggcgtttcc
atgacgacactggaggatgtctacctgaaactggaagttgaggcagagattgatcaagca
gattacagcgtgttcaatgcccagcaagcgcaggatgaaatggatacaaagtccctcgat
gacatggagcagagcctcctgatgctgtcagagacaaaggccccagccatgagcaatgca
tccctctggaagaagcaggtttccaccatagccaaagttcatttccttagcctgaagagg
gaaaacaagtgtgtgagagttatgttgttgctttttctgatttttcttgtagttcagatt
ctgttgtttttcatacaccacgtcatcaaaaattctgtagctgctatcaaactttcccca
gatttgtacttgctgaagcctggagaggactatcacaagtacaggagtcgcctcctgctg
cagaactccacagaatcagatatcaatgacattgtccactcccttgggagcatgaacata
ctcctggagatgttcaatgacagtgattatgtctctgctgcccctcatagtgcagctttg
aatgtgtttgaccttgaatccaggcagaactatgttttcacactcgtgttcaacagcacc
atggtgcactccctgcctgttctgatgaacattgtcagcaacctgcttctgcgcaacctc
aacgtgactgagagcattcacatctggagcaaccccttcgttcagaatcttccagacacc
attttcagactggagatctattttgaagctgtactgctgggaatcatcattactggaatg
cctccctactttgccatggacaatgcagaaaaccataaggtaaactcccaggtgttgatt
cagaggctgcagaagagttttggggtctga
DBGET
integrated database retrieval system
