Dryobates pubescens (Downy woodpecker): 104298068
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Entry
104298068 CDS
T08526
Symbol
NUP153
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
dpub03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104298068 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104298068 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104298068 (NUP153)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104298068 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
104298068
NCBI-ProteinID:
XP_009896408
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
MVAQENLGWIKYRACSTEAQGIISRVTESVKNIVPGWLQKYFNRSEDKCVDTNESTNQEE
NPVNYHHDYANEDTIVIDGRVTPESARINLEEPSTSRSALNYSDVLTRPSLHRSHLNCTM
LDSTVPHCQPSTSSSLGIGSPGLSLVKEIKDSTSQHDDDNISTTSGFSSRASDKDITVSK
NTSAPLLWSTEGERSHSLSQHSATSSKKPAFNLSAFGSPSSSLGNISVFKTSQLGDSPFY
PGKTTYGGAAAAARETKARIAPYQPPVRRQMKAKQASVQSYGVTSSTARRILQSLEKMSS
PLADAKRIPSSASSPLSSPVDRSVLNTTSFQSKQKQMESQHPPVQKLVTPKAITLAVSRA
QYFKPSLTPATDSSRSHQRVDMKHKGMVEKSFPAEQQVKTSESNLTYPKVSTPASNGLSS
GARRTKICNFFIREVKLKSATIKFYSXEVEEPVLPQVPLPISTATLPSFNFSFLASNAVS
SPPSAASKAAMNKIQPASNVGSPVFRFSSPIVKSTEAEVLPPLSIGFTFSVPVVKSAELS
GSSDTSVTSLLTQDTTPVNSTSNKKKKEEYDGSTKPAKVLKEGSVLDILKSPGFMSVETH
SCVSAQPVTSTVVYTRPAISSFSAGKDTPKQASSLWQSDTHDPCPQNKTTDGKCVTCEAA
KVSTLDSTKQTISSSQCVSSKGAVPTAGTLGFEDKFKTSSNTWDCDTCLVHNKPEATKCI
ACETPKPGTGVMPALTLPVVTDNSVTVTSSSSSTDTTVTLGFGEKFKKPKGSWDCAVCLV
TNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSAASGGFLDLDKFKKPEGSWDCEVCLVTN
KAEATKCIACESAKPGTKAELKGFGTATVSTSAAMPSFTFGVQSSSESSNSLSSIGGFKF
GEQGSFKFGIASESASSNTMTGGFKFPTSSGDIKFGVSSSDSKPEESKKEGKSNSFSFGL
PSTNSQAPSTFQFGTANLGQQEKKEEPVLGGFGFGTSSTSSVATSENKTGVGGFTFGTVA
EKEVASPGLDFKKPDEKKDEAVSAKGGFSFGSVESAPASQFVLGRTEEKQDSVTSAAPLA
FGKKADNEELKAQPIFSAVMAEHTKEESTAKPMFNFSFVKPSEKESEQTQSSFAFGAQTS
TSDQGAAKPSFSFLSSNSSSTVVPTTSANSSSVFGSAISSSNPQPVPTPFVFGQPSNTVS
SSVFGGSGESAASQSFGFSQENKPATTSSSTGMGLASFVFGSGASSSNAANSGFTFGATT
TSSSTGPSSSFLFGSGPPVPAAGPAFGASQPPAFGQSQGSSQPSAPSFGSLSTTLFSAGA
QPAPAAPPAFGSVTSSTQPSVFGQQVAQQPGFGSSTPSTGSVFQFGSNTSNFNFSSSPGV
FTFNANPPAPAAPAQPSGSSGFSFSQPATFIVGSNGKNVFSASGSSSSGRKIKTAVRRRK
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggtggcacaagagaacctgggatggataaagtacagagcttgtagtacagaagcgcag
ggaatcattagcagagtgacagaatcagtgaaaaacattgtaccaggatggctgcagaag
tatttcaatagaagtgaagataagtgtgtagatacaaatgaatctacaaaccaggaagag
aatccagtaaactatcaccatgattatgcaaatgaagataccatagtgattgatgggaga
gtcacgcctgaatcagcaagaattaatttagaagaaccatccacaagtagatctgcactg
aactactcagatgtgttaacaaggccctctcttcatcggagccatttgaactgtaccatg
ttggattccacagtaccacattgtcagccctctacgtcatcttcacttggtattggcagt
cctggactgtctctggtaaaagaaataaaagattctacctctcaacacgatgatgataac
atctcaacaaccagtggcttctcctctagagcatctgataaagatatcactgtttcaaaa
aatacttcagccccactgctctggtccacagagggtgaaagatctcattccctctcacag
cattctgcaactagctctaaaaaacctgcattcaatttatctgcttttggatctccctct
tcttcacttggaaacatttctgtctttaagacaagccagcttggggattctccattttac
cctggaaagaccacttacggtggtgcagctgcagcagcaagagagacaaaggcccgaatt
gctccttaccagccaccagtaagaagacaaatgaaagctaaacaagcaagtgtgcagtcc
tatggtgtgacaagttccacagcgcggcgcatcttgcagtcgctggagaagatgtcaagt
cctttggcggatgctaaaaggattccatcttctgcatctagtccactatcttctcctgtg
gacaggagtgtgctgaatactactagcttccagtccaaacagaaacagatggaatcacag
catccacctgtccagaaactcgtgacaccaaaggcaatcactctggcagtgagtagggcc
cagtattttaaaccatctctgactccagcgactgattccagcagaagtcaccagagagta
gatatgaagcacaaaggcatggtagagaagagttttcctgcagaacagcaagtgaaaaca
tctgaaagcaatttgacctaccccaaggtcagtactcctgcatccaatggtctgtcttca
ggagcaagaagaactaagatttgcaacttctttatacgagaggtgaaactaaaatctgcc
acaattaaattttactcctaggaagtggaggaaccagtgctaccacaagttcctctgccc
atcagtactgcaacactgccttccttcaacttcagttttcttgccagtaacgctgtctca
tcgccaccaagcgctgcttcaaaagcagccatgaacaagatacaaccagcaagtaatgtt
ggcagtcctgtgttcagattttcatctccaattgtgaaatctactgaggcagaagtgcta
cctccgttgtctattgggtttacatttagtgttcctgttgtaaaatcagcagagctttct
ggatccagtgatacatctgtgacgtccttacttactcaagataccacccctgtaaacagc
accagcaataagaagaaaaaagaggaatatgatggctccaccaagcctgcgaaggtgttg
aaggaaggaagtgtgttagacatcctaaaaagccccggttttatgtctgtggaaacacac
tcctgtgtgtctgcacagcctgttacaagcacagtggtctatacaaggcctgcaataagc
agtttttctgcaggtaaagacacacctaagcaagcatcctcactttggcaatctgacacg
catgacccctgtccgcaaaacaaaaccacagatggcaaatgtgtaacctgtgaagctgct
aaagtgtcaacgcttgacagtacaaaacagaccataagctcaagtcaatgtgtctcctct
aagggagcagtacctacagcagggacattgggctttgaagacaaatttaaaacatcatct
aacacatgggattgtgatacctgtctggtccacaacaaacctgaagctacaaaatgtata
gcatgtgagacaccaaagcctggaacaggagtaatgcctgctctgacattgccagtggtc
acagacaactcggtgacagtgacgtcttcctccagcagcactgacacaacagtcactctg
gggtttggagagaaatttaagaagccaaaaggctcttgggactgtgcggtgtgccttgta
acaaataaggcagaagacagcaaatgtgtagcttgtcagtccgagaaaccagggagttca
gtgcctgtgaccagtagcagtgtttctgcattttctgctgcttctggaggatttctggat
ttagacaaattcaagaagcccgaaggaagctgggattgtgaggtctgcttggtcacaaac
aaggcagaagccacaaaatgtatagcctgtgaaagtgcaaagccaggcaccaaagcagag
ctcaaaggttttggtactgctaccgtgtccacaagtgctgcaatgccatcatttacattt
ggtgtccagtcatcctctgaatcttctaattccttaagtagcatagggggttttaaattt
ggagaacaagggagcttcaagttcggcattgcctctgaatctgcatcctccaacactatg
actgggggatttaagtttcctactagttcaggggacataaaattcggagtttcttcctca
gactctaaaccagaagaaagtaaaaaagaaggtaaaagtaacagttttagctttggactt
ccatctacaaatagtcaggctccttcaacatttcagtttgggacagcaaacctgggacag
caggaaaagaaagaggaacccgttttgggaggctttggttttggcacgagttctacttct
tccgtagctaccagtgagaataaaactggggttggtggcttcacttttggaactgtggca
gaaaaagaggtggcatcacctggtcttgactttaagaaaccggatgaaaaaaaggacgaa
gctgtctcagcaaagggaggcttctcttttggcagcgtggagtctgcacctgcctcacag
tttgttttgggaaggacggaagagaagcaggactctgtcacttctgctgctcctttagca
tttgggaagaaagctgacaatgaagagttaaaggcacaacctattttttcagctgtgatg
gccgagcataccaaagaggagagcacagcaaaacctatgttcaattttagttttgtgaaa
ccctcagagaaggaaagtgagcagacacagtcatcttttgcatttggggcacaaacgagt
acttcagatcaaggagcagcaaagccatctttcagcttcttgagctctaattcctccagc
acagtggtacccaccacttcagccaatagcagcagtgtgtttggcagcgccatctcttcc
tcaaatcctcagccagttcccactccttttgtgtttggacaacccagcaacactgtgagc
agctctgtttttggtggttctggagagtctgcagcatctcagtcatttggcttctcccaa
gaaaacaaaccagcaaccacatcttccagcaccggcatgggtcttgcttcatttgtcttt
ggttcgggcgccagcagtagcaatgcagcaaattcaggcttcacctttggagccacaacc
acatcaagttccacagggccatcctcttcatttctgtttggctctgggcctccagtgcct
gctgctggcccagcatttggcgccagccagccaccagcatttggccagagccaggggtcc
agccagccaagtgctccaagttttggctcgctgtcgacaacgttgttctcagctggtgct
cagccagctcctgctgctcctcctgccttcggctcagtgacaagcagcactcagccttct
gtgttcggacagcaagtggcccaacagccagggtttggctctagtacgcccagcactggt
tccgtattccagtttggaagtaatacttctaatttcaacttctcaagtagcccaggagta
tttacttttaatgcaaaccctcctgcaccagcagcaccggcacagccttccggctcttca
ggattttccttcagccagcctgcaacatttatagtggggagtaatgggaaaaatgttttc
tctgcttctggatcatcaagttctggtcggaagataaagactgcagttagacgtagaaaa
taa
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