Dryobates pubescens (Downy woodpecker): 104298073
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Entry
104298073 CDS
T08526
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104298073 (ASCC3)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104298073 (ASCC3)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104298073 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
Motif
Other DBs
NCBI-GeneID:
104298073
NCBI-ProteinID:
XP_009896412
LinkDB
All DBs
Position
Unknown
AA seq
2207 aa
AA seq
DB search
MALPRLTGALRSFSNVTKHEDYSEELADLKTKRLKLHEQLLKSELTWKKIMKFVDDHLDK
KEHQAVNGDLKAILQAAKQIVGAENGQEAIESGAVFLFKTFHNKECVGHEETKAIKQMFG
PFPSSSATTACSATCRIASHFTEEQLTALIQMAEEQNGDDRVLFGKNVVFSFDMHDLDHS
EELPVNGEADARKIISLDYNKFLTNQLNHLQNYCDGKAEPKPEGKVDDSFLWYEVGKYLN
ESQGGTPGGPTTEDLCCTLYEMLSSSKSGDELQNELFELLGPEGFELIEKLLQNRSLILE
RSLTCPNDNRFQALQEQCKRLLGESTKPNYGCQVTIQSEQEKLLLKQYRREEKRNARKEK
QAGEDGEASGEGLMNFDPKELRMQRELALLNARSMPVLARQREVDLEKIHYPHVYDSRAE
AMKTSAFIGGAKVFLPEAVQRENNKMYEEVKIPHSEPMPIGIEEKIVYIKDLDEVGQLVF
KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHLQQGMIKKDEF
KIVYVAPMKALAAEMTNYFSKRLEPLGITVKELTGDMQLSKGEILRTQMLVTTPEKWDVV
TRKSVGDVALSQLVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATL
PNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYENVLKQ
IMAGHQVMVFVHARNATVKTAMSLREKAKNNGHICHFLSPQGSDYGQAEKQVQRSRNKQL
RELFPDLXXXXXGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYA
AKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLE
SLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPSLEKHREQ
LVIEVGRKLDKARMIRFEERTGFFASTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIF
AIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNYGKINILLQTYISRGEMDS
FSLISDSAYVAQXXXXXVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFSV
LPPSVLSKLEEKNLTIDKMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSIIMEATIQPIT
RTVLRVRLNISPDFTWNDQVHGTVGEPWWIWVEDPANDHIYHSEYFIIQKKQVITKEPQQ
LVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITA
LGHPEYEALYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPT
SKAVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWD
GVSRSWQNRSYVQKVSILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLSTA
LANARDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSH
SPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLKMDEREMNDIIVTVRDSNLKLTL
AFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKT
RRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLEVLA
DHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNLDDVSHDTMNKYLSSLVEKSL
YDLECSYCIEIGEDSRSIEPLTYGRIASYYYLKHPTIGMFKDQLKPESSIEELLLILTNA
EEYADLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHLLLQAHFSRAMLPCPDYATD
TKTVLDQAIRICQAMLDVAAHHGWLVTALNITTLVQMVVQGRWIHDSSLLTLPNVELHHL
YLFRKWSQGKRKSVHGGYQGPIECLPELMAACEGRENVFASIVGSELQAAHISQAWNFLC
RLPILNVRLSIKGCWNEQAQAEGEVPVPSSATDDKRWLRLHADQEYVLQINLQRTQLGYQ
GKQDSKAVAPRFPKVKDEGWFVILGEVDKRELIALKRTGYVRNRSTVSVAFYTPETPGKC
IYTLYLMSDSYLGLDQQYDIYLNVVPARTSAQATAEVSDALSHLALE
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcctcgccttacaggtgctttacgctccttttcaaatgtcactaagcatgag
gattacagtgaggaattggctgacttaaagactaaaagattaaaactccacgagcagttg
ctgaagtctgagcttacttggaagaagataatgaagtttgttgatgaccacttggacaag
aaggaacaccaagctgtaaatggtgatctcaaagctatattgcaagctgcaaaacaaata
gttggagctgaaaatggacaagaagcaattgagagtggagctgtttttctctttaagaca
tttcacaacaaggaatgtgttggccacgaggagaccaaggcgatcaagcagatgtttggg
ccatttccatcatcgtctgctaccacagcttgtagtgccacatgtcggattgcttctcac
ttcaccgaggaacagcttacagccctcatacagatggctgaagagcaaaatggtgatgac
agagtcctctttggtaaaaatgtagtgttttcgtttgacatgcacgatttggatcactcg
gaggagctgcctgtgaacggcgaggccgacgcacggaagatcatcagcttagattataac
aagtttctgactaaccagctgaatcacttacagaattactgtgatggcaaagctgagccc
aagcctgagggaaaagtagatgattcttttttgtggtatgaagtaggaaagtacctgaac
gaatctcaagggggtacccctggagggccaacaacagaagacctctgctgtactttgtac
gagatgctgtcttccagcaaaagtggtgatgaacttcagaatgagctgtttgaattgctg
ggtcctgaagggtttgaactcatagagaagcttctacagaacagatctctgattctggaa
agatctttgacttgtccaaatgacaacaggtttcaggctcttcaagaacagtgcaagagg
ctcctgggagagagcaccaagcccaattacggttgtcaagtgacaattcagtctgaacag
gaaaagctgctactgaagcagtaccgtcgggaagagaagagaaatgccaggaaagagaag
caggctggggaagatggagaagcttctggagaaggattaatgaactttgatcccaaagag
ctgcggatgcaaagagaactggcacttctgaacgctcgaagcatgcctgtcctggccagg
cagagagaggtggacttggaaaaaatccattatccacatgtttatgattccagagctgaa
gccatgaaaacatctgcattcattgggggtgcaaaggtgttcttaccagaggcagttcag
agagaaaacaacaaaatgtatgaagaagtaaagatcccccacagtgagccaatgcctatt
ggtattgaagagaagattgtttacattaaagacttagatgaggttggacagcttgttttc
aaaggcatgaaaagactgaacaggatccagtccatagtctttgagactgcctacaacacc
aatgagaacatgctcatctgtgcccccactggtgctggcaagaccaacatcgccatgctg
actgtgctgcatgaaatccgccagcacctccagcagggcatgatcaaaaaggatgagttt
aagattgtctacgttgctcccatgaaggctctggcagccgaaatgacaaattacttcagc
aagcgcctggagccgctcggcatcacggtgaaagagctgactggggacatgcagctgtcc
aaaggggagatcctcaggacacagatgcttgtgactactccagagaaatgggatgtagtg
acaaggaaaagtgttggtgatgtagccctctctcagctggtaaaactcttgattctggat
gaagttcatctgttgcacgaagacagaggacctgtgcttgaaagtatagtagcaaggacc
ttacgtcaggttgagtccacacaaagcatgattaggattttgggcctttcagctacctta
cccaattatcttgatgtagccacatttctgcatgtcaacccctacattggactcttctac
ttcgatggccgcttccgacccgtcccgctgggccaaaccttcataggaattaagacaacc
aataaggtgcagcagctgaatcacatggatgaagtttgctatgaaaatgtgctgaagcaa
ataatggctggacaccaggtgatggtgtttgttcatgctagaaacgccacagtgaaaact
gctatgagtcttcgagaaaaagcgaaaaacaatggtcacatctgtcacttcttgtcaccc
caaggatcagattatggacaagctgaaaagcaggtacagagatccagaaacaagcagctg
cgtgagctgttcccagatttattnnnnnnnnnnnnaggaatgctgcggcaagacaggagc
ttggtggagaacttgttttctaatggccacatcaaagtcttggtttgcacagctacactg
gcctggggggtcaatcttcctgctcacgctgttgtgattaagggaacacaaatatatgct
gcaaaaagaggctcctttgttgaccttggaattttagatgtcatgcagatctttgggcga
gctggacggcctcagtttgacaaattcggagaaggcatcatcatcaccacgcacgataaa
ctcagccactacctgactcttctcactcagcagaacccaatcgaaagccagttccttgaa
agccttgctgacaacctaaatgcagagattgctcttggcacagtaactaacgtggaagaa
gcagtaaagtggataagttacacttatctctacgtacggatgagagcaaatccattagtg
tatggcatcagtcacaaagcttatcagatggacccaagtctagaaaagcaccgagagcag
ctggtaattgaagttggcagaaagctggacaaagcccgcatgattcgctttgaagagcga
accggcttctttgcttctacggatctaggcagaactgccagccactactatattaaatac
aacactattgagaccttcaatgagttgtttgatgctcataaaacagaaggtgatatcttc
gctatagtatcaaaagccgaagaatttgaacagataaaggtgagagaagaagaaatagaa
gagctggataccttactgaatgatttctgtgaacttcctgctccaggaggtgtggaaaac
aattatggaaagattaatatcctccttcagacatatattagcagaggggagatggacagc
ttctcccttatttcagactctgcatatgttgcacagnnnnnnnnnnnnnttgttcgggct
ctcttcgagatcgccctcaggaagcggtggcctgccatgacctatcggctcctcaacctc
agcaaagtcatcgacaagaggctgtggggctgggtcagccctttgaggcagttctcagtc
ttgccaccatcagtcctctcgaagctggaggaaaagaatctcaccatagacaagatgaag
gacatgagaaaagatgaaataggtcatatgctgcatcatgtgaagattgggttaaaggtg
aagcagtgtgtccatcaaatcccctccatcatcatggaagcaaccattcagccaatcacc
cgcacggtgctccgagtgcggctgaacatctctcccgacttcacctggaatgatcaggta
catggcactgttggagagccctggtggatctgggtagaagaccctgctaatgatcacatt
tatcattcagagtacttcatcattcagaaaaagcaggtcattactaaagagcctcagcag
ctggtgttcacaatcccaatttttgaacctcttccttctcaatattacatccgagctgtg
tctgatagatggttaggagcagaggctgtatgcatcataaattttcaacacttgattctt
ccagagagacatccaccccacacagagcttctagatcttcagcctttgcctatcacagcc
ttgggacacccagaatacgaagccctgtacaaattcacccacttcaaccctatccagacc
cagatatttcatacactttaccacacagactgtaacgtcctccttggagcaccgacaggt
tctgggaaaacagttgcagctgagcttgccatctttagagtgtttaacaagtatcccaca
tcaaaggctgtgtacatcgcacccttgaaagccctcgttcgggagagaattgaggactgg
aaagttaggattgaagaaaaacttgggaaaaaggttgtagagttgacaggagatgtgact
ccagatatgagagctattgcccaagctgacctgattgttactaccccagagaagtgggat
ggtgtcagcagaagctggcagaacagaagctacgttcagaaggtttccatccttatcatc
gatgagatccatctgctgggggatgagagaggcccagtgttggaagtcatcgtctctcga
accaacttcatttcatctcacacggagaagcctgtgagagttgttggtttatccactgct
ttagccaatgccagagaccttgctgactggctaaatattaatcagatggggctgttcaac
ttccgaccctccgtgcgccctgttcccctggaggtgcacatccagggcttccctggccag
cattactgtccccgcatggccagcatgaacaaacctgcgttccaggccattaggagccac
tctccagccaagcctgtcctcatctttgtctcctccagacgccagacccggctgactgcc
ttggacctgatcgctttcctggccaccgaggatgatcccaaacagtggctgaagatggat
gagagagagatgaatgacattatagtgactgtcagagattccaatctgaagctgaccctg
gcttttggaataggcatgcaccacgcaggcctgcatgaaagggacaggaaaacggtggaa
gagctctttgtgaactgcaaaatccaggttcttattgccaccagcacgttagcttggggt
gtaaattttccagcccatttagtcattgttaaagggacagaatactacgatgggaaaaca
aggcgctacgtggattatcccatcacagatgtgcttcagatgatgggccgtgctggcaga
ccacagtttgacgaccaaggcaaagctgtcattctagtccatgacattaagaaagacttc
tacaaaaaattcctgtatgaacccttcccagtggaatcaagcttgttagaagtgctggct
gaccacttgaatgctgaaatagctgctggaactatcacttctaagcaggatgcaatggat
tatatcacctggacttatttcttccgtcggcttatcatgaacccaacttactataacttg
gatgatgtgagccacgacactatgaataagtacctctcaagcctcgttgagaaatccctc
tatgatttggaatgctcctactgcattgaaattggggaggacagtcgcagcattgaaccc
ctgacgtacggccgcatcgcttcctattactacctgaagcatccaactattggcatgttc
aaagaccagttgaaacctgaaagcagcattgaggaattgctcttaattctgacaaatgct
gaggagtatgcagacctgcctgtgagacacaatgaggatcagatgaacagcgaactggca
aagcatctccccattgaagtcaatccccactcctttgacagctctcacacaaaaacacat
ctcctgctgcaagcccacttcagccgtgccatgctgccttgtccagattatgcaactgat
acaaagacagtgctggaccaagcaattcgaatttgtcaggctatgctggatgttgcagca
caccatggctggctggtgactgccctcaacatcactacgctggtgcagatggtggttcag
ggcaggtggatccatgactcttccctgctcactttgcccaatgtagaattgcaccacctc
taccttttccggaagtggagccaaggcaaaaggaagagtgtgcatggaggttaccaagga
cctatcgagtgtcttcccgaactaatggctgcctgtgaaggaagagaaaatgtttttgct
tccattgtgggcagcgagttgcaagcagcacacatttcacaggcttggaatttcttgtgt
cgtttgccaatcctaaacgtcaggctgagcattaagggctgctggaatgagcaggctcag
gcagagggcgaggtgcctgtcccttcctcggcaacagatgacaagaggtggctgaggctg
cacgccgaccaggagtacgtgctccagatcaacctgcagagaacccagctgggctatcag
ggaaagcaagacagcaaagcagtggctcctcggttccccaaggttaaagatgaaggctgg
tttgtgatcttgggagaggtggataagagagagctcattgccctgaagagaactggctac
gtcagaaaccgaagcactgtgtctgttgctttctacaccccagaaacccctggaaagtgt
atctacaccttgtatctcatgagtgacagctaccttggcctggaccagcagtatgacatt
tacctgaacgttgtaccagccaggacttcagcacaagccacagcagaggtgtcagatgct
ctgagtcacctggctctggagtaa
DBGET
integrated database retrieval system
