Dryobates pubescens (Downy woodpecker): 104298272
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Entry
104298272 CDS
T08526
Symbol
TRIM2
Name
(RefSeq) tripartite motif-containing protein 2 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104298272 (TRIM2)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104298272 (TRIM2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
TEN_NHL
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-ANAPC11
Beta-prop_IFT122_1st
Prok-RING_4
ANCHR-like_BBOX
Mala_s_1-like
PAF-AH_p_II
zf-RING_11
Caskin-tail
Motif
Other DBs
NCBI-GeneID:
104298272
NCBI-ProteinID:
XP_009896631
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MASEGSSIPSPVVRQIDKQFLICSICLDRYKNPKVLPCLHTFCERCLQNYIPAHSLTLSC
PVCRQTSILPEKGVSALQNNFFITNLMDVLQRTPDNSIEESSILETVTAVAAGKPLSCPN
HDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEID
SALHFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQTQ
LDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSDKLNELAERDFPLQPRENDQLD
FIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTVIGQPMSVTITTKDKDGELCKS
GNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIKGSPFKLK
VVRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKG
RNKGEFTNLQGVAASTNGKVLIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVA
VHPSGDIIIADYDNKWVSIFSSDGKFKAKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVF
IFQPNGKIVTRFGSRGNGDKQFAGTLDGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFL
LKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGP
QGLALTSDGHVVVADSGNHCFKVYRYLQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaggctccagtatcccaagtcccgtggtccgtcagatcgacaagcagttt
ctgatttgcagcatatgcctggaccgctacaagaaccccaaagtgcttccttgcctgcac
actttctgtgagaggtgcttacagaattacattccagcccatagcttaaccctttcctgc
ccggtgtgccgccagacctccattctaccagagaaaggggtttctgcactccagaacaac
ttctttatcaccaacctgatggatgtcctgcaacgaacgccggacaacagcattgaagag
tcctccatcttggagactgtcactgctgttgctgcaggcaaaccgctctcctgtcccaat
catgatggaaatgtgatggagttttactgccagtcctgcgagacagccatgtgccgagag
tgtacagagggagaacatgcagagcatcccacagtaccactcaaggatgtggtggagcaa
cacaaggcttctctccaagtccaattagatgctgtcaacaaaaggcttccagagatcgac
tcagcacttcattttatatctgaaatcatacaccagttaaccaaccaaaaggctagcatt
gtagatgacattcattccacttttgatgaactccagaagactttaaatgtgcgaaagagc
gtgctgcttatggaactggaagtgaattatggccttaaacacaaagtcctccagacacag
ctggataccttacttgaaggacaagaaagcattaaaagttgcagcaactttacagcccaa
gctctcaaccatggcactgaaactgaagttctgctggtgaagaagcaaatgagtgacaag
ctgaatgaactggctgagcgggacttcccattgcagcctcgtgaaaatgatcagttggac
ttcatagtggaaacagaaggcctgaagaaatcaattcacaatctgggtactattttaacc
accaatgctgtcgcctctgaaacagttgccacaggtgagggactgaggcagacagtgatc
ggacagcccatgtcggttaccatcacaactaaggacaaagatggggagctctgtaaatct
gggaatgcttacctcactgctgagctgagcacacctgatggcagtgtagcagatggagaa
atacttgacaataaaaatggcacttatgaatttttgtatactgttcagaaagaaggggac
ttcactttgtcactgagactttatgatcaacatatcaagggcagcccattcaaactgaaa
gtggtcagatcagcagatgtgtctcctactactgaaggtgtgaagaggcgtgttaaatct
cctggcagtggtcatgtgaagcagaaagctgtgaaaagacctgcgagcatgtacagcact
ggcaaaagaaaagagaatcccattgaagatgatttgatcttcagagtaggcaccaaagga
agaaacaaaggggaatttacaaatcttcaaggtgtagctgcatctacaaatggaaaagta
ttgatagcagacagtaacaaccagtgtgtgcagatattttccaatgatggtcagttcaaa
agccgttttggcatacgaggaagatctcccggccagttgcagaggccaacaggagtggct
gtgcatccaagtggtgacatcattattgcagattatgataacaaatgggttagcatattc
tcatcagatggaaaatttaaggccaaaattggatctggaaagctcatgggccctaaaggt
gtttctgtggatcgtaatggacacataattgtagtggacaataaagcatgctgtgtcttc
atcttccagccaaatgggaaaatagtcaccaggttcggtagtcgaggaaatggtgacaag
cagtttgcaggtacacttgatggtcctcattttgcagctgtaaacagcaacaatgaaatt
attgttacagattttcataaccattctgtcaaggtatttaatcaggagggagaattctta
ctgaagtttggatcaaacggagaaggaaatggacaatttaatgcaccaactggagtagct
gtagattctaatggaaatattatcgtagcagattggggaaacagccggatacaggttttt
gatggaagtggatcatttttatcctacattaacacctctgctgacccactttatggtccc
caaggtctggcccttacttctgatggccatgttgtagttgcagactctggaaatcactgc
ttcaaggtctaccgatacttacagtag
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