Dryobates pubescens (Downy woodpecker): 104298319
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Entry
104298319 CDS
T08526
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104298319 (TRIM71)
04121 Ubiquitin system [BR:
dpub04121
]
104298319 (TRIM71)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104298319 (TRIM71)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104298319 (TRIM71)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104298319 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
Vgb_lyase
DUF3656
Pannexin_like
Motif
Other DBs
NCBI-GeneID:
104298319
NCBI-ProteinID:
XP_009896679
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MGRHVGHSFVYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQS
EVKAVTTVEKIRQVKAKSLYLQVEKLRQNLNKLDNTIXEGRTMDILLARDRMLAQVQELK
NVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASF
TVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADISDQQNGTYLVSYRPQLEGEHLLSVM
MCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADR
SNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDVSRRIIVADKDNHRIQIFTFEGQ
FILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLFGPDGMFLNKYGFEGALWK
HFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQE
GRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRI
LVF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggggcgacatgtgggtcacagctttgtctacctccaagatgccctacaggattccagg
actctcaccattcagctcctggcagatgctcagcaaggacgacaggcgattcaactaagc
attgagcaggcccagactgtggcagagcaggttgagatgaaagcgaaggtggtacaatct
gaagtcaaagcagtgactactgtggagaagattcgccaagtcaaggcgaagtcactctac
ttgcaagttgaaaagttacgtcagaacctcaataagctggacaacaccatcnnagagggc
cgtaccatggatattcttctggcccgggaccgcatgctggctcaggtgcaggagctgaag
aatgtgcgaggccttcttcagccacaggaagacgacaggatcatgttcactccccctgac
caggcactgtatatggccattaaatcaatgggctttgtcagcagtggggcttttgctcct
ctcaccaaagccactggggaagggctcaagcgtgcgctgcagggcaaagtggcctctttc
acagtaatagggtatgaccacgatggggagcctcgcctgtcgggaggtgacatgatctct
gcagtggtgatgggcccggatggaaacctttttggggcagacatcagtgatcagcagaat
gggacctacctggtcagctaccgtccacagctggagggagaacacctgctatctgtgatg
atgtgcaaccaacacattgagaacagccccttcaaagtcgttgtgaaatctggtcgcagc
tatataggcatcgggctgccagggctctcctttggcagtgagggagacagcgatggcaaa
ctctgccgcccctggggagtcagtgtagacaaagaaggctacatcatcgtcgctgaccgc
agtaacaatcgcatccaagtgttcaaaccatgcgggaccttccatcacaagttcggcacg
ctgggctcccgcccggggcagttcgaccgccctgctggtgtggcctgtgacgtctcacgc
aggatcatcgtggctgacaaggacaatcatcgcatccagatcttcacgttcgaggggcag
ttcattctgaagtttggggagaaaggaacaaagaatgggcagttcaattacccgtgggac
gtggctgtcaatgcagagggcaagatcctggtctctgacacaaggaatcatcgagttcag
ctgttcgggcctgatggcatgttcctgaacaagtacggcttcgaaggggcactctggaag
cactttgattcccccagaggtgtgactttcaatcatgagggccacttggtagtgacagac
tttaacaaccatcgccttctggtcatccatccagactgccagtcagcacgttttctgggc
tcagagggtactgggaacggtcagttcctgcgcccgcagggagtggcggtggatcaagag
gggcgcattatcgtggctgattccaggaaccaccgggtgcagatattcgagtcaaatggt
agctttttatgcaagtttggcactcagggaagtggcttcggtcagatggaccgtccttca
ggtatagccatcacccctgatggcatgattgtggtggtcgactttggaaacaatcgaatt
cttgtcttctaa
DBGET
integrated database retrieval system
