Dryobates pubescens (Downy woodpecker): 104298320
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Entry
104298320 CDS
T08526
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104298320 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104298320 (CNOT10)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104298320 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
ANAPC3
TPR_8
ARM_TT21
TPR_7
TPR_17
TPR_MalT
ARM_TT21_2nd
BLOC1_2
DUF948
Motif
Other DBs
NCBI-GeneID:
104298320
NCBI-ProteinID:
XP_009896680
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MFLILCHFQAGNYDTCLQHLNTLQDINKDDYKITLNTAVAEFCKSNQTTTDNLRQTLNQL
KNQVHSVVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQA
VCFLLVDLYLLTYQAEKALHLLAVLEKMISQGNNNSKNGKNESGGNTNKDSSNQKAESGA
LIEVAKSKIHQYKVRAYIQMKSLKACKREIKSVMNTAGNSASSLFLKSNFEYLRGNYRKA
VKLLNSANIAEHPGFMKTGECLRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDNACAQ
LGTGSADPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNP
RLWLRIAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNVVYNDGQ
SSAIPVASMEFAAICLRNALLLLPEDQQEPKQENGSKTSNQLGGNTENSESSEACSNKSH
EGDKFIAAPPSSPLKKQELENLRCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSL
KFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKQ
TPQCYPSSVTSARTMMLFNLGSAYCLRSEYDKARKCLHQAASLIHPKEIPPEAILLAVYL
ELQNGNTQLALQIIKRNQLLPSVKTLSEMRKKPLFQPVHSIQPIQMPAFTTVQRK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgattctatgccatttccaggctggaaactatgatacttgtttacaacaccta
aataccctgcaagacataaacaaagatgactacaaaataactttgaatactgctgttgct
gagttctgtaaaagtaaccagaccacaacagacaatttgagacaaactcttaaccagctg
aagaaccaggttcactctgttgttgaagaaatggatggtttagatgatgttgaaaacagt
atgctatactacaatcaagctgttattttgtatcacctgcgtcagtatactgaagctata
tcagttggagagaagttgtaccagtttatagagccttttgaagagaaatttgcccaggct
gtgtgcttcttgcttgtagacttgtacctgctaacttatcaagctgagaaagccttgcat
ctgcttgctgttctggaaaaaatgatttcacagggcaacaataacagcaagaatggaaaa
aatgagtcaggtggtaatacaaataaagattcctcaaatcaaaaagctgaaagtggagct
ttaatagaagttgctaaatctaagatacaccagtataaggtgagagcctatatacagatg
aagtcactaaaggcatgcaagagggaaatcaagtctgttatgaatacagctgggaattca
gcttcttctctctttcttaagagcaattttgaatatttgaggggcaattaccgtaaagct
gtcaaacttttaaacagcgcaaacattgcggaacaccctggcttcatgaaaacaggtgaa
tgcttgcggtgtatgttctggaacaatcttggctgcattcacttcgcaatgggaaagcac
aacttaggaattttttactttaagaaagccttgcaagaaaatgataatgcatgtgcacag
ctaggaacgggcagtgccgatccaggaaaaaaattttcagggagacccatgtgtacacta
ctgactaacaaacggtatgagctgctgtacaattgtggaattcagctcttgcatattggg
aggcccttagctgcctttgaatgcttgattgaggcagtccaggtttatcactcaaaccct
cgtctttggctgagaatagcagaatgttgcattgctgccaataaagggacatcagaacaa
gagactaaaggtctccccagcaaaaagggaattgtgcaatctatagtaggacaaggctac
caccgtaagatagtcctagcatcccagtcaatacagaatgttgtttataatgatggacag
tcctcagcaatacctgtagccagtatggaattcgcagcaatttgtctaagaaatgccttg
cttctactgccagaagatcagcaggagccaaagcaagaaaatggatctaaaactagtaat
cagctggggggaaacacagaaaacagtgaaagcagtgaagcatgcagcaataaaagtcat
gaaggagataaattcattgcagctcccccttcttcgcctttgaagaaacaggaattagaa
aatttaaggtgctcaatacttgcatgcagtgcttacgtggctctggctttgggggataac
cttatggcactgaatcatgcagataaacttcttcagcaaccaaagctgtcagggtctctt
aagttccttggccatttgtatgcagcagaagctctcatctctctagacagaatatctgat
gccatcactcacttgaaccctgagaacgtcactgatgtttcccttgggatctcttcaaat
gagcaggatcaagggtctgacaaaggagagaatgaagcaatggaatcttctggcaagcag
actccacagtgttatcccagttcagtcacatcagcaagaacaatgatgttgtttaacctt
ggaagtgcttactgtttgaggagtgaatatgacaaagctcggaagtgtcttcatcaggct
gcttcactcatccaccccaaagagatccctccagaggctatcctgctggctgtgtatctt
gaattgcagaatggtaacacacagctagcgttacagatcatcaagagaaaccagcttctc
ccttctgtgaaaaccctctctgagatgcggaagaagcctctctttcagccagtccactca
atccagcccattcagatgccagctttcaccactgttcaaaggaagtga
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