Dryobates pubescens (Downy woodpecker): 104298424
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Entry
104298424 CDS
T08526
Symbol
UTP20
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104298424 (UTP20)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104298424 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
104298424
NCBI-ProteinID:
XP_009896788
LinkDB
All DBs
Position
Unknown
AA seq
2779 aa
AA seq
DB search
MKSKSSAHKPGNTHRFLTFSERLSNVNIDIIHRIDRTGSYAEEVETYFSEGLRKWRELNL
TQHFVQFYSEVANKCQSFNQLVYYQNAIVQSLKTHLQVQGSLAYQPLLDLVVQLARDLQT
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVADKNAIFNLMLCDLGEHPKKVEGVGQLLFEMCKGVRSMFH
SCAEKVMKLILVKLGPVTEEETELPWVAVGEAFEQMIRSAVLHIHKEHFDIVFKCLEESL
LDLQKKITKANCCVASEQMERVLRAYLILVQHANGSKVSVPEDVCRILIKMLQTPHLSSS
CCKKNTISAFLLAENIALPDSLTKEAIEKIYXSFWFCYVFLFLQHFLPCFLEYIEHCFSG
TDVTEKNEAMAILAKLILVKAEPPTIGSMAFEKYPLVFTESSVSSNTRQQTSKREGKKAE
VPVLDHVLSLIHLPEEEAITDLSQPWVALVVLPHIRPMDKENILPCLTSFIDSLLAAIDK
GSLCKGSLFVACQAVSTLLSLAESSEILHLLPVERVKSLVTTFPSDPSALLLADLYYTRL
ALCGCQEPLSQQNLMDLLEKLHPNISTGVSKVRLLTVRILNHFENPPSAQIEGDDTGELQ
PIFAILLQAELVPATVNDYREKLLHLRKLRCDIVKPAIPSESLQEVPLRYLLGMLYINFS
PLWDPVIELITSHAKEMENKEFWKVLYEHLERAATYAEMELQNELDEEEESTAATESEKM
PEGGVGAVFLEQLSIRTDCSERLDHTNFRFLLWKALDKFPDRVEPRSRELSPLLLRFIRN
EYYPADSLVAPSQDLRKRTPGTVAAKEIPGEGVNDVAMEEEEEEEEKEEGEPITLGLPKR
KTRRAAAKQLIAHLQVFSKFSNPRALYLEPKLNALYTQLLSHQDQNVQRVALDCIMTYKH
PHLLPYRENLQRLLEDKSFKEEIVHFSISEETAVVKMEHRPGLIPVLMRILYGRMRNKTG
NKTQGKSAASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGPCQSAVLRSMSEVDL
AKVLPLGRQHSLFNGLEVVLKNMGHLIHQYLPEILQILLCMTAVVSCILQQREKVQPRLI
NPLKNLRRLGLKLVVEFFSDYETYSFSVEEIDAVFHAVVWPQVCRLASESQYSPTFRLKL
IHTWSKNPRYFPLLAKQKPDQPEYDILTNVFAVLSAKNLSEATSSLVMDIADSLLNSPDF
EPTEQVSSLNVTGCVVTVTGDMTEESLSLGCRLVLPHVPAILQYFSKTMLNVEKVKKKKY
RAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQSNMEQGTEIDILETVQNLLKHCS
NPASFLKPLAKLFSVIQNKLSRHKLCLVFQTLSDLDSELTYITDVVKLNAFDKRHLDDID
FDERLSAFQSITAHIKQMQAVDMDFLIPVMHNCFYTIQLGDMALSDNANLCLTALIHRLA
EIDHTEDDYKELIQHTLLESVRRGLKSKTESIQQDYTSLLSCLIQTFPANPEFQDLVQLT
NRHDPDMDFFENMKHMQIHRRARALRKLAKQLTEKKLLLSSKSLQNYIMPYATTAIFDDK
MLKHENMVTASVEVVGAVCQHLSWSAYLYHLKHFIHVLQTGQISPKLGVSLLETVLEAFH
FDHETLEKQLVTLGNQEAAAMDLEPVVEAEEAMELEQGEGEEEMVEEKKEKDLPEEPAAP
DQAAETAEDVKEVTKPVSFLPRNKEELECLIKHIQDTVTVNILPKLHRCIVAKVKRDEEH
KLVKSNVVNDDEVVRIPLAFAMVRMMQCLPQEVMEANLPSILLTVCTFLRNRFQEIRDIA
RSTLTKIMEVLGVHYLLYILKEMQSTLVHGYQLHVLTFTVNLLLKGLASRLSAGDLDPCL
DILIEVFNQELFGNIAEEKEVKGIVSKVMEARKNKSYDSYEILGKFIGKGQVMKLILPLK
EVLETTTSLKIVRKVHEALRLIMAGLIFNSDMNAESLLLLSHGLISENLPLLTEKAKKKV
APPPDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSGLRLLHMSLKRSKVNSSEE
HALEMLDPFVQLLIDCLKSMDVKVITGALQCLVWILKFPLPSVSTNLESLIKQLFLLLKE
FAKTGIAKGQNFHLVVSCFKCVTILVKNVKSQITSKQLQVLLGFAEEDIYDSSRQATAFG
LLKAILSRKLMVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYLKYILDYPLGDKLKPNLD
FLLAQLEYEYETGRESALEMIVYLLDTFPQDLLHKYCGLFFLSLCMMMINDDSAKCKKMA
ALTCKSLLSKISTENQDLMFSLVTEWFHSTKSSHRRLAAQACGLFVEVEGVMFERRLPAV
LTLIEKEINPAEFEDITEEEEEKAADRLLFSFLVLVTKLITDCNLIQLTKSSDVVSSIWG
HVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWKERKAEKRKQSSAKVPPSTVFLT
AELDKKMKELAFAFCHQLQSKFLDLSLGEQVIKNLLFVAKVVYLLAPASEEGKEAEGEVG
IEAGGQEASEDEEEKDVSAQGEGREKKDQPATLLWLMKKLSLMAKREAAYSPRIPLKRSC
IFKFLGAISVDLGKDRIRPYLPTILTPLYRELNSNYAEQDPTLKNLSQEIIELLKKLVGL
EAFSLAFSSVQKQASQKRAMRKKQRALQTVANPDIAARKKLKRHKSKAESRKRKIEFLRP
AYKAKRPRSHALKDLAMVE
NT seq
8340 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagtcctcagcccacaagccggggaacacgcaccggtttcttaccttttca
gaacgcttaagcaatgtcaatatcgatatcattcatcggatcgacagaactggaagctat
gctgaggaggttgaaacctacttttctgagggactgcggaaatggagggaactgaacctc
actcagcattttgtgcaattctacagtgaagtggccaacaaatgccagtccttcaaccag
ctggtctattaccagaatgccattgttcagagcttgaagacgcatttgcaagtccaaggc
agtctcgcttatcaacccctgttagatctagtggtgcagctggctcgagatcttcaaact
gatttctatcctcattttcatgacttcttcctggccatcaccaagctgctggacacacag
gacacagagctgctggaatgggcttttacctctctttcctatctctacaaatacttgtgg
agattgatggtgaaggacatacacaacatatacagcctgtacagcaccctgctggctcac
cacaaacttcacatcagaaactttgctgccgaaagttttgtcttcctaatgagaaaggtt
gctgataaaaatgcaatcttcaatttaatgctgtgtgacctgggggagcaccccaagaag
gtggaaggtgtaggccagctcctttttgagatgtgcaagggtgttcgaagcatgttccac
tcctgtgcagagaaggttatgaagttaattctggtaaagctggggcctgttactgaagaa
gaaactgagttaccatgggtggctgtaggagaagcctttgagcagatgatcagatcagct
gtgctccatatccataaagaacattttgacattgtcttcaagtgcctagaggaatcactt
ctagacctgcagaagaaaataactaaggcaaactgctgtgtggcttcagagcagatggaa
agggttctgagagcttatctgatcctagtgcaacatgcaaatggatccaaagtctcagtg
cctgaagatgtctgtcggatcttaataaaaatgttacaaacaccacatctctcatcatct
tgctgcaaaaaaaacaccatttctgctttcctgctggctgagaacattgccttgcctgat
tcattgaccaaggaagctattgagaagatttactaatctttttggttttgttatgttttt
ttgttccttcagcattttcttccatgctttctagagtacattgagcattgcttctctggc
acagatgtcactgaaaagaatgaggcaatggcaattctggctaaactcattctggtgaaa
gcagagcctcctaccattggttccatggcatttgaaaagtatcctcttgttttcactgaa
tcatctgtcagctctaatacaaggcaacaaacaagtaaaagagaaggaaaaaaggcagag
gtcccagtgttggatcatgtactgtctttaatccatctaccagaggaggaggccatcact
gacctttcacagccttgggttgccttggttgtactgccacatatcaggccaatggacaaa
gaaaacattctgccctgtttgaccagttttatagactctctcctcgcagccattgacaaa
ggaagcctctgcaaaggaagcctgtttgtggcctgccaagctgtaagtactcttctcagt
ttggcagagtcttctgaaatactccatttgttacctgtggagcgtgtcaagagcctagtg
accacttttccttcagacccctctgcattgctgctggcggatctctattacacaaggttg
gctttgtgtggctgccaggagcccctttcccagcagaacctaatggacttgcttgagaag
ttgcatcctaacatttccactggtgtttccaaggtccggctattgactgttcgcatcctg
aaccattttgagaatccaccttcagcacagattgagggtgatgacacaggggaactccag
ccaatatttgccatattgctccaagcagagcttgtgccagcaacagtgaatgattacagg
gagaaactccttcatctgaggaaactgagatgtgatatagtgaagcctgcaatacccagt
gaatctttgcaagaggtgcctcttcgctatctactgggaatgctttacattaacttcagc
cctctctgggatcctgtaattgaactcataacttctcatgcaaaggagatggagaataaa
gagttctggaaggtcttatatgaacacttggagagggctgctacctatgctgaaatggag
ctgcaaaatgaactagatgaagaggaggaaagcactgctgccacagaaagtgagaagatg
ccagaaggaggggtgggagctgtcttcctggagcagctgagcattagaacagactgcagc
gagcggctggaccacacaaacttccgctttctgctctggaaggcactggataagtttcca
gacagagtggagcctaggtcaagagaactttccccacttcttttgagatttattagaaat
gagtactacccagcagattcattagtggctccatctcaggatctcagaaagagaactcct
ggtacagtagcagcaaaagaaatacctggtgaaggggtgaatgatgttgctatggaagag
gaggaggaagaagaagaaaaggaagaaggggaaccaatcactctaggactaccaaaaagg
aaaacaagaagagctgctgctaagcagctaatagcccacttgcaagtcttctctaaattc
tccaacccccgtgcgctgtacctggagccgaagctgaacgcgttgtatacccagttactg
tctcatcaagaccagaatgtacagagagtagctcttgactgcataatgacatacaagcac
cctcacctactgccatacagggagaacttgcaaaggctactggaagacaagagttttaag
gaagaaatagtccacttcagtatctctgaggagactgcagtagtgaaaatggagcatcgc
ccaggtctcatccctgttctgatgagaattctctatggcagaatgaggaacaaaacaggg
aacaaaacacagggcaagtctgcagcgagcactcgcatgtcgattgttctgcgcttcctt
gccggctcgttgccagaagagataaggatgttcttggatcttctctttgaagctgtgaag
caattcagtaatggaccttgccagagtgcagtgcttcgaagtatgtcagaggtggattta
gctaaagtcctgcctcttgggcgtcagcatagcctcttcaatggtcttgaagttgtgttg
aaaaacatggggcacttgatccatcagtacctgcctgaaattctacagattctgctctgc
atgacagctgtggtatcctgcatcctccagcaaagagagaaggtccagcctaggttgatt
aatccactgaagaacttgaggcgtcttgggctcaagctggtggtggagttcttttctgat
tatgagacctacagctttagtgtggaagagattgatgcagttttccatgcagtggtatgg
cctcaggtctgcaggttggcctcagagagtcagtattctccaactttccggctgaaactc
attcacacctggagtaaaaatcccaggtattttcccttgctggccaagcagaagccagat
cagcccgagtatgatatactgacaaatgtgtttgctgtgctgtcagccaagaatctgtct
gaggctacatccagccttgtgatggacatagctgatagccttctcaacagcccagatttt
gagcccacggagcaggtttccagtctgaacgtgactggctgtgtcgtcacagtcactggg
gacatgacagaagagagcctcagcctaggctgccgcttggttctgcctcacgttcctgcc
atacttcagtactttagcaagacaatgttaaatgtggagaaggtgaaaaagaagaagtac
agagctcaagtcagcaaagagctgagtattctttccaagatcagcaaatttatacaagag
aagagccagaactcggtgctcgtgagccttctcctgcctttcctttatcagagtaacatg
gagcagggcacagagattgatattctggagacagtgcagaacttgctgaagcattgctca
aatcctgcaagctttctcaaacccctggcaaagcttttttctgtcatccagaacaaattg
tctcgacataaattgtgcttggtatttcagactttatctgatttggacagtgaattgaca
tacattactgatgttgttaagctgaatgcttttgacaaacgccatctggatgacatcgac
ttcgacgagcggctgtcagcttttcagtcgatcacagcccacatcaagcaaatgcaagct
gtggatatggacttcctcatccctgttatgcacaactgtttctacaccatccagctaggg
gacatggctctaagtgacaatgcaaacctgtgcttgaccgctttgatccaccgactggca
gaaattgaccacacggaagatgactacaaggagctcatccagcacactctcctggagtct
gtgagaagaggactgaagagtaagactgagagcatccagcaggactacacatcattgctt
tcctgcctcattcaaacattcccagcaaacccagaattccaggatttggttcagctgacc
aaccgccacgaccccgacatggacttctttgagaacatgaagcacatgcagatccacagg
agggcccgagctctgaggaaactggctaagcagctcactgagaaaaagcttctgctctct
tctaaatccctgcagaactacatcatgccttatgctactactgccatttttgatgacaaa
atgcttaagcatgaaaatatggtcacagcctcggttgaagttgttggagctgtctgccag
cacctctcgtggtcagcctacttgtaccacttgaagcacttcatccatgtcctgcaaaca
ggacagatcagcccaaagctgggagtcagcttgttagagacagtgctggaagcctttcac
tttgaccatgaaacacttgaaaagcagcttgtgacccttggcaaccaagaagctgctgcc
atggaccttgagccagtggtggaggctgaagaagctatggaactggagcagggcgaaggg
gaagaggaaatggttgaggaaaagaaagagaaggatcttcctgaggagccagcagcacct
gaccaagcagctgagacagctgaggatgttaaggaagtgaccaaacctgtttctttctta
ccccgaaataaagaggagttggagtgtctgatcaagcacattcaggacacagttacagtc
aacatcctgcctaagctgcacaggtgtattgttgcaaaggttaaaagagatgaggaacac
aagcttgtgaaatccaacgttgtgaatgatgatgaggtagttcgcattccattggctttt
gcaatggttaggatgatgcagtgtcttccccaggaagtgatggaagccaacctgccaagc
atcctgctgacagtctgcacattcctgaggaacaggttccaggagatccgcgacattgcc
cgcagcaccctcactaaaatcatggaagtgttgggagtgcactaccttctgtacatctta
aaagagatgcagtccactcttgtccatgggtaccagctccatgtgctgactttcactgtg
aacctgttactgaagggccttgcttccaggctcagtgctggtgatttggacccctgctta
gatattctgattgaggttttcaaccaggagttgtttgggaatatagctgaagagaaggag
gtgaaggggatcgtctccaaggtcatggaggcacgcaagaacaaaagctatgattcctat
gaaattcttgggaagttcataggaaagggccaggtgatgaaacttattctgccactgaaa
gaggttctggagaccaccacaagcttgaagatagtccggaaggtgcatgaggccctgcgt
ctcatcatggcagggctgatcttcaactcagacatgaatgcagaatccctcctcctcctc
agtcatggtctcatcagtgaaaacttgcctctgctcactgagaaggccaagaagaaagtt
gcccctcctccagatcctcgactgcaaccagagagctgcctgctgctgcagcccactccc
accagaggagggcagaaagcacgtgtcagcagcaggaccaacacttacatcttggtggat
tcagggctccggttgctgcacatgagcctgaagaggtccaaagtaaattcttctgaggag
catgctttggaaatgttggacccttttgttcagctgcttatagactgcctgaaatctatg
gatgtcaaggtgataactggtgctctgcagtgcttggtgtggatcttgaagttcccgttg
ccttctgtcagtacaaacctggagtcactgatcaagcagcttttcctcttgctgaaagaa
tttgccaagacaggaatagccaaaggccagaatttccacctggttgtgagctgtttcaag
tgtgtaacgatcctggtgaagaatgtgaagagtcagataacaagcaagcagctgcaggtg
ctgctgggctttgctgaagaagacatctacgattcatcacgccaggccactgcctttggc
ctcctcaaggctattctctccaggaagctgatggtccctgaaattgatgatgtgctgcag
aaggttgcccagctggccatcacaggtcagagcgagccagtgcgagtccagtgcaggcag
atttacttaaagtatatcctggactacccccttggggacaagctgaagcccaatttggat
tttctacttgcccagctggagtacgagtatgagactggaagagaatctgcactggagatg
attgtgtacctccttgacaccttcccacaggatctcctccataaatactgtgggctgttc
ttcctctccctttgtatgatgatgatcaacgacgactctgccaaatgtaaaaagatggca
gccttgacctgtaagtctctgctcagcaagatcagcactgaaaaccaagacctgatgttt
tccctggtcacagagtggtttcacagcacaaagagctcccacaggaggctggctgcccag
gcctgtggtttgtttgtggaagtggagggagtgatgtttgaacggcggctgccagctgtc
ctcaccttgattgaaaaagaaatcaacccagctgaatttgaagatataactgaagaggag
gaggagaaggcagcagataggctgctcttcagctttcttgtgctggtaacaaagctaatc
acagactgcaacttgattcagctaaccaagagcagtgatgttgtgagcagtatctggggt
catgtccagtctcacctgtggtatcctcacagctgggtctggctgacagctactgagatc
tttggcttgttgtttgcatcttacaagccagaagatcttgtcaacaagtggaaggaaaga
aaagcagagaagaggaaacagtcatcagcaaaggtgccaccatccacagtcttcttgact
gctgaactggacaagaagatgaaggaacttgcatttgccttctgccatcagctgcagtcc
aagttcctggacctgtctctgggagagcaggtcataaagaatttgctttttgtggcaaaa
gttgtttacttgctagcccctgcctcagaagaaggtaaagaggctgaaggagaggttggt
attgaagcaggaggacaggaggcctcagaagatgaggaagaaaaagatgtttctgctcaa
ggagaggggagggaaaagaaagaccagccagccacattgctgtggttaatgaagaagctc
tctctcatggcaaagagggaagcagcatattcccctaggatccctctgaagagaagctgc
atctttaagttcctgggagcaatctcggtggatctggggaaagacaggatcaggccatac
cttccaacaatcctcacccctctgtacagggagctgaacagcaactatgcagagcaagat
ccaacactgaagaacctttcccaagaaatcatagaactgctgaagaagttggttggcttg
gaggccttctcgctggccttttcctctgtgcagaaacaggccagtcagaaaagagccatg
aggaaaaagcagagggctttgcagactgtggcaaaccctgacattgctgcaaggaagaag
ctgaagaggcacaagagtaaggcagaaagcaggaagaggaaaatagagtttctacggcct
gcctacaaggccaagagacctcgaagccatgcactgaaggatctagcaatggtggaatga
DBGET
integrated database retrieval system
