Dryobates pubescens (Downy woodpecker): 104298866 Help Entry 104298866         CDS       T08526                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism dpub  Dryobates pubescens (Downy woodpecker) Pathway dpub04140   Autophagy - animal dpub04148   Efferocytosis dpub05132   Salmonella infection Brite KEGG Orthology (KO) [BR:dpub00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104298866 (VPS39)    04148 Efferocytosis     104298866 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     104298866 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dpub04131]     104298866 (VPS39) Membrane trafficking [BR:dpub04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     104298866 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_WDR19_1st SAM_CEP-1_C Motif Other DBs NCBI-GeneID:  104298866 NCBI-ProteinID:  XP_009897277 LinkDB All DBs Position Unknown AA seq 914 aa AA seqDB search MIPSAGTVFDSFLAKNESPVFCLKCLTEDSGVLESPVKDRLTCVNDEGKEEWLLVGTKQG HLLLYRIKKDIVPGEVMSSESVCCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLEN NIYVHDLLTFQQITTVSKAKGASLFTCDLQQSETGEEVLRMCVAVRKKLQLYFWKDREFH ELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVRLGFGIQCLKSLFPTGKQLEPLVAP VADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEP RLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAE MKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYR KQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKS KKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKK GLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSVWVLRDFPEDGLKI FTEDLPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQG LMKEYLNSFPADKTPVPAGEEGGDLGDYRKKLLLFLERSSWYEPSRLISDFPFDGLLEER ALLLGRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVH CLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENA QKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIV VHYFCSKEVNTLDT NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atgatccccagtgcgggcaccgtgttcgactcgttccttgctaaaaatgagtcccctgtg ttttgccttaaatgtctcacggaagacagcggtgtgctcgagtctcctgttaaggatcgg ttgacttgtgttaatgatgagggcaaggaggaatggctccttgttggcaccaaacaaggg catcttctgctttacaggataaagaaagacatagtgccaggagaggttatgtcatcagaa agtgtctgttgcaataggtttgaagtgacactggagaaatccaacaagaacttctccaaa aagattcagcagattcatgttgtttctcaatttaaaatcctggtcagtctattagaaaac aacatttatgtccatgacctattgacatttcaacaaatcaccacagtttccaaggcaaaa ggggcatctctcttcacttgtgatcttcagcaatcagagacaggggaagaggtgctgaga atgtgtgtggcagtgcggaagaagttgcaactctatttttggaaggacagagagttccat gaactgcaaggggacttcagtgtacctgatgtaccaaagtctatggcctggtgtgaaaac tccatctgtgttggctttaagagggattattacctgataagggtaagactggggtttggg atacagtgtttaaaaagtttgtttcccacagggaagcagctggaaccattggtagctcct gtagcagacgggaaagttgcagttggccaagatgatctaacagttgtgctcaatgaagaa ggagtctgtactcagaaatgtgccttgaattggacagatattcctatagccatggaacac cagcctccctacatcattgctgttctgccaagatacgtggagatccgcactttcgaacct cggctgctggtacagagtattgagctgcagagaccacgcttcatcacctctggaggcaca aatattatttatgtagcaagtaatcactttgtttggcggctcataccggtgtccatagcc acacagatccagcagcttctgcaggacaagcagtttgagttggctttgcagttggcagaa atgaaggatgattcagatagtgagaagcgacaacaaattcaccacataaagaacctcttc gccttcaacctcttctgccagaagcgctttgatgaatccatgcaagtttttgccaagctt ggtacagatcccactcatgtgatgggtctgtatcccgacctcctgcccacagattacagg aaacagctacagtaccccaaccccctgccagggctctctggggcagagctggaaaaggca catttagctctcatagactacttaactcaaaaaagaagtcagttggtgaagaagctaaat gattctgaccatcagtccagtacttcaccccttatggaaggaacacccactatcaagtcc aaaaagaagctgctacaaatcattgataccaccctattaaagtgttacctccatacaaac gtggcactggtggcaccgttgctacgtctggagaacaatcactgccacattgaggagagt gaacatgtgctgaagaaggcacacaaatacagtgagctgataatactctatgagaagaaa ggtctgcatgagaaagcgttacaggtactagtggatcagtctaagaaagccaactcacct ttgaagggtcacgagaggacagtgcaatatctgcagcatttgggcacagagaacttgcac ttggtattttcctactctgtctgggtgctaagagattttcctgaagatgggctgaagata tttacagaagacctccctgaagtggaagctttgccacgagacaaagtgctcagtttcttg atagaaaactttaaaagcttgactattccttatctggagcacataattcatgtctgggaa gaaacaggtgcagacttccacaactgtctgatccagctgtactgtgagaaagtgcagggc ttaatgaaagagtatctcaattctttccctgcagataaaactccagtgcctgctggggag gaaggaggagacctgggggattaccggaaaaagctgctactttttctggagcggtctagc tggtatgaacctagtcgactaattagtgacttcccctttgatggtctcctagaagaacgt gctctgctcttgggtcgtatggggaaacacgagcaagctctatttatttatgttcatatt ctgaaggacaccaacatggctgaaaactactgccataaacattatgacaggaacaaagat ggcaacaaagatgtctatctgtctctgctccggatgtatctctctccacccagtgttcat tgcctgggaccaatcaagatggaagtgctggagcctcaagccaatctgcaggctgctctg caggttttggagctacatcacagcaagctggataccaccaaggccataaacctactccca gcaaatactcagatcagtgagattcgaatcttcttagagaaagtccttgaagaaaatgct cagaagaaaagatttaatcaagtactcaagaatcttctccatgcagagtttctgagggtt caggaggagcggatcttgcatcagcaagtgaagtgcattattacagaggagaaggtgtgc actgtatgtaaaaagaagataggtaacagtgcatttgctcgataccctaacgcgatagtt gtgcattatttctgctccaaagaagtcaacacattggacacctga

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