Dryobates pubescens (Downy woodpecker): 104298881
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Entry
104298881 CDS
T08526
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03250
Viral life cycle - HIV-1
dpub03272
Virion - Hepatitis viruses
dpub04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104298881 (PDCD6IP)
03272 Virion - Hepatitis viruses
104298881 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104298881 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104298881 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpub04147
]
104298881 (PDCD6IP)
Membrane trafficking [BR:
dpub04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
104298881 (PDCD6IP)
Exosome [BR:
dpub04147
]
Exosomal proteins
Proteins found in most exosomes
104298881 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
T2SSM
Motif
Other DBs
NCBI-GeneID:
104298881
NCBI-ProteinID:
XP_009897297
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MLPPRQRSPTVTSRLNRACLQAPLQLSACPGSLPTSSSTPASRGRLADTREEGNENPLRK
YYDQLCSIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKTCVLFNCGAL
ASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISPDTAGTLSLI
MLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAYKQCQYKDTLPKEVFPVLAAKHC
IMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYINVKDLVDKINRALTA
AKKDNDFIYHDRVPDLKDLESIGKASLVKSTPVVVPLSQKFTDLFEKMVPLQVQQSVSVY
NQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQSILNKSKSVIEQGGV
QTIDQLIKDLPELLQRNKEILDESLRLLDEEESTDSDLRTKFKERWQRTPSSDLYKPLRI
EGANYHNVLNKAVQADGQVKERYQSHRDTIALLCKPESELNAAIPSANPAKTLQGSEVVN
VLRTLLANLDEIKKEREQLENDLKSVNFDMTSKFLTALAQDGAINEEAISVTELDRLYGS
YTQKVQESLKKQEELLKDIQNAHQDFSKMKQSNNESNLREEVLKNLAVANDNFVELLSNL
KEGTKGTKPQPPARPPPPVISAASSPSSASAPSGTSAAPSAVPAPAPGASAPAASTAPSQ
AQGPPYPTYPGYPGYCQMPMPMGYNPYMYGQYNLPYAPSPVYPNPGQAPYPPPQQPGYPF
PQQPYYPQQ
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccccacggcagcgaagccccaccgttacctctaggttaaaccgcgcctgttta
caagcaccactgcagctctctgcctgccccggctctctcccgacctcctccagcaccccc
gcatcccggggccgacttgccgacacccgtgaggaaggtaatgagaacccgctccggaaa
tactatgatcagctgtgttcaattgagccaaagtttccattctctgaaaatcaggtctgt
gtaacattcacatggaaagatgctttcgataaagggtcactttttggaggatctgccaaa
ctggctctggcaagtttgggatatgagaagacctgtgttttgttcaactgtggagcactg
gcaagccagattgcggctgaacagaatctagataacgacgaaggactaaaagctgcagct
aagcactatcagtttgcaagtggtgctttccagcacatcaaagatacggttttgtcagcc
ttaaatcgagagcctacagtggacatctctccagacacagcaggaactctcagtctgatt
atgttggctcaagctcaagaagtcttctttttgaaagctacaagagataaaatgaaagat
gctatcatagctaaactagctaaccaagctgcagattactatggcgatgcttacaaacaa
tgtcagtataaagacactttgcccaaggaggtgtttcctgttctggctgcaaagcactgc
ataatgcaggccaatgcagagtatcatcagtctatcctggcaaaacagcagaagaaattt
ggggaagaaattgggaggttacagcatgcagcagatttggtgaaaacagtagcatctcgt
tatgatgagtatataaatgttaaggatctggttgacaaaatcaaccgtgcgcttacagct
gccaaaaaagacaatgacttcatttaccatgaccgggttcctgacctgaaagatttagag
tccattggaaaagccagtcttgtgaagtctactccagtggtggttcccctcagtcagaaa
ttcactgacctgtttgagaagatggttccattgcaagttcagcagtccgtcagtgtttat
aaccagagaaaggcagatctagtgaacaggtcaatagcccagatgagagaagccacaaat
ctggcaaatggtgtcttggcttccctcaatcttcctgctgccattgaagatgtgtctggt
gataccgttcctcagtctattttgaacaagtcaaagtctgtgattgaacagggaggagtt
cagactattgatcagttgatcaaagatctgcctgaactgctacaaaggaacaaagaaatt
ctagatgaatcactgagattattagatgaagaggaaagtacagacagtgacctgcgaaca
aaattcaaggagcgctggcagcgaacgccttccagtgacctctataagcctttaaggata
gagggagccaattaccataatgtgttgaataaagctgtgcaggccgatgggcaggtgaag
gagcgctatcagtcccaccgggataccattgcacttctctgcaagccggagtcggagctc
aacgcagccattccttctgctaacccagcaaaaacgttacaaggaagtgaggttgttaat
gttttaagaactttgctggccaatctggatgaaattaagaaggagagagaacaactggaa
aatgacctgaaatctgtcaattttgacatgacaagcaaattcctgactgcacttgcgcag
gatggtgctataaatgaggaggctatctctgtgactgagttggacagactttatggaagt
tacacacagaaagtgcaggagtccttaaaaaagcaggaagaacttctcaaagacattcag
aatgcacatcaggatttctcaaagatgaaacaatcaaacaatgaatctaatttaagagaa
gaagttttgaagaacttagctgtagcaaatgacaactttgtggaacttctgtccaattta
aaagaaggcacaaaggggactaaaccgcagccaccagcacggccaccaccaccagtgatt
tctgcagcaagcagtccctcttccgcatcagcaccctctggaacatctgcagctcctagt
gctgttcctgctcctgctccaggagccagtgcacctgcagcaagcactgcaccttcacag
gcacagggacctccttacccaacttatccaggttacccagggtattgccagatgccaatg
ccaatggggtataatccatacatgtatggtcaatataatctgccatatgctccctcacct
gtgtatccaaaccctggacaagcaccatatccaccacctcagcaacctggataccctttt
cctcaacagccttactaccctcagcaataa
DBGET
integrated database retrieval system
