Dryobates pubescens (Downy woodpecker): 104298898
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Entry
104298898 CDS
T08526
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104298898 (CHD2)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104298898 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
104298898
NCBI-ProteinID:
XP_009897325
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MSSFSTISHSASEEASGSDSASQSESEQGSESNSSSESSESQSESESESTCSKSQQTPPE
TKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEASSESENESPKRRG
QKQMKKPNKWKREISGEEEDEDGGEQGTSGESEPEPKKIKARRPAQRRTVAKTSVKKPHK
RQCGKKRKKPESSEDDDDDEDDETPKRQTRRRASKNVSYKEDDDFETDSDDLIEMTGEGA
DEQQDNSETIEKVLDIRLGKKGATGASTTVYATEANGNPSADFDPEKDEGEVQYLIKWKG
WSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDIEYFNCQQELASEL
NKQYQIVERVIAVKTSKSAMGHSDFPANSRKTSSNDPEYLCKWMGLPYAECSWEDEALIS
KKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENLELRDYQLEGLNW
LAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPLSTLTSWQREFEV
WAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKDKAVLGSINWAFL
GVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDF
EEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILT
RNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLETLQSLVRSSGKLI
LLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN
ADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYR
LVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKF
GAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFKVANFATMEEEET
ELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSESDAETKR
RLQRSSGSESETDETDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIKAYKKFGLPLERL
ECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPSEGKGPGKRRGPTIKIS
GVQVNVKSIIQHEEEFEMLHKSIPADPEERKKYRLTCRVKAAHFDVDWGVEEDSRLLVGI
YEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLLKKDLDKKENMKD
GEEGKLKKRKPRVKKENKAPKVKDEHGNELSPPRHSDNQSEEGEVKEDGLEKSPVKKKQK
KKENKENKEKQTSTKKEKESDKEKKKSKDKKEKPKGSEAKSGSKGKRSQGPVHITAGSEP
IPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEHTRNCLLKIGDRI
SECLKAYSDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQEEEEQKKKEDMS
SMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKIHLPPSHAQQQMHGHPRDNYGHPNKRHF
SNADRGEWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRSRGEPHRSSGNYRP
NNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDEFRPQNYHQQDFRRMSDHRPPM
GYHGQGPSDHYRSFHTDKSADYKQPLPPPHSAMSDPRSPPSQKSPHDSKSPLDHRSPLDR
SLEQKNNPDYNWNVRKA
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttctctaccatcagtcactcggcatctgaagaagcctctggctctgactct
gcaagccagtctgaaagtgaacagggcagcgagtcaaacagcagctcggagtcctccgag
agtcaatctgaatccgaaagtgaatcaacatgttcgaaatcccagcagacccctcctgaa
accaaagaaaaaccagcctctaagaaggaaaggatagcagatgttaagaagatgtgggaa
gaatatcctgatgtttatggggttaggaggtcaaaccgaagcagacaagagccgtcgcga
tttaatataaaagatgaggcaagtagtgaatctgaaaatgagagcccaaaaagaagaggc
cagaagcaaatgaagaaaccaaataaatggaaaagagagatctctggtgaagaggaggat
gaagatggaggggaacagggcaccagtggagagagtgagcctgaacccaagaaaattaaa
gcgaggagacctgcccaaagaagaacagtggccaagaccagtgttaaaaagcctcacaag
cggcagtgtggcaagaagagaaagaaaccagagtcatctgaagacgatgatgacgacgaa
gatgatgagacccccaagagacagactcgacgaagggcctccaagaatgtcagttacaaa
gaagatgatgattttgagacggattctgatgacctgatagagatgactggggaaggagct
gatgaacaacaagacaacagtgaaactattgagaaagtcctggacatcaggcttgggaaa
aaaggagccactggtgcttccaccacagtgtacgcgaccgaagccaacggcaaccccagc
gccgacttcgatcccgagaaggacgagggagaggttcagtacctgatcaaatggaaaggc
tggtcatacatccacagcacgtgggagagcgaggagtccctgcagcagcagaaagtgaag
ggcctgaaaaagcttgagaacttcaagaagaaagaggaggagatcaagcagtggctgggc
aaggtgtcacctgaagacatagaatatttcaactgccaacaggagctagcttcagagctg
aacaaacagtatcaaatagtggagagagtcattgctgtgaagaccagcaagtctgcaatg
ggacattcggatttcccagcaaacagtcgcaaaacatcctcaaatgaccctgaatacctg
tgtaagtggatggggctgccctatgctgagtgcagctgggaggatgaggctctgatcagc
aagaaattccagcactgcatcgacagcttcaacaaccggaacaactccaaaaccattccg
acccgggactgcaaggtgttgaagcagaggccaaggtttgttgccctgaagaaacaacct
tcttacattggtggtgagaacctagagctgcgagattaccagctggagggcctcaactgg
cttgctcactcgtggtgcaagaacaacagtgtgatcctggctgatgaaatgggcctgggc
aagacaattcagacaatatccttcctgtcgtacctcttccatcagcatcagctctatggc
cctttcctggtggtggtgcccttgtccactctcacctcatggcagagagagtttgaagtc
tgggcaccagagataaatgtggtggtttacatcggagacctgatgagcaggaacatgatc
cgtgaatatgagtggatccactctcagtccaaaaggttgaaattcaatgcacttatcaca
acatatgagatcctcctcaaggataaggccgttctgggcagtattaactgggccttcctg
ggcgtggatgaagcccatcgcttgaagaacgacgactctctgctctacaagacattgatt
gatttcaagtccaaccacaggctgctgatcactggcaccccacttcaaaattcactcaaa
gagctctggtccctgctgcatttcatcatgccggagaagtttgagttctgggaggatttt
gaagaggatcacgggaaaggtagagagaatggctaccagagccttcacaaggtcctggag
ccatttctcctacgcagagtgaagaaggatgtggagaaatctttgccagccaaagtggag
cagatccttcgtgtggagatgtctgctttgcagaagcagtattacaagtggattttgaca
agaaactataaagctctttccaagggaacgagggggagcacatctggtttcctgaacatt
gtgatggagttgaaaaagtgttgcaaccactgctaccttattaaacctcctgaggaaaat
gagagagagaatggccttgagaccctgcagtctctggtcaggagcagtgggaagctgatt
ctcttggacaagctgctgaccaggctgcgggagagaggcaacagggtgctgatcttctcc
cagatggtgaggatgctggacatcttggcagagtacctgactatcaaacactaccctttt
cagcgcttggacggctcgatcaaaggggagatccgaaagcaggcgctggaccacttcaac
gccgacggctctgaggacttctgtttcttgttgtcaacacgagctggagggctgggaatt
aatctggcctctgctgatactgttgtgatctttgactcggactggaacccacaaaatgat
cttcaggctcaggctcgagctcaccggattgggcaaaagaagcaggtgaacatttaccgc
ctggtcacaaagggtacggtggaggaggagatcattgagagggccaagaagaagatggtg
ctggaccacctggtgatccagcgcatggacaccaccggccgcaccgtgctggacaacaac
tccggcaggtccaactcaaatcctttcaacaaggaggagctgacagctattctgaagttt
ggagctgaagatctcttcaaggagcttgaaggggaagagtcagagcctcaggagatggac
attgatgagatcctgcggctggctgaaacacgggagaatgaagtgtccaccagtgctact
gacgagctcctctcccagttcaaggtggccaactttgcaaccatggaggaggaggagacg
gagctggacgagcggtcccagaaggactgggacgatatcattccagaggagcagaggaaa
aaggtggaggaggaagaaaggcagaaagaattggaggaaatctacatgctgcctcgaatc
aggagctccaccaaaaaggcccagacaaatgacagtgaatcagatgcagaaaccaagaga
aggcttcagagatcatctgggtcagagagtgagaccgacgagaccgacgatgagaagaga
ccgaagcgcagggggcgtcctcgcagcgtcaggaaagacaccgtggaaggatttactgat
gctgaaatcaggaggtttatcaaggcttacaagaagtttgggttgcccctcgaacggctg
gagtgcattgcccgggatgctgagctggtggacaagtctgtggctgatctgaaacggtta
ggggagctcatccacaacagctgtgtgtcagctatgcaggaatatgaggagcagctgaag
gaaaatccaagtgaaggcaaagggcctgggaaaagaagaggtcctactatcaagatctct
ggtgtgcaagtcaacgtgaaatccatcatccagcacgaagaggagtttgaaatgctgcat
aaatccattcctgcagacccagaggaaaggaagaagtaccgcctgacgtgccgtgtcaaa
gctgcccattttgatgtggactggggagtggaggaggattctcgcttgctggtgggaatt
tatgagcatggctatggaaactgggagctaattaaaacagatccagagctgaagctgtct
gataagatcctgcctgtggagacagataagaaacctcagggaaagcagctccagaccaga
gttgattatctactgaaactgctgaagaaagatctggacaagaaagaaaacatgaaggat
ggggaagagggcaagctaaagaagaggaaaccacgagtaaagaaagagaacaaggctccc
aaagtcaaagatgagcatgggaatgagctctcccctcctaggcactcagacaaccagtca
gaagaaggtgaagtcaaggaggatggcttggaaaagagcccagtgaaaaagaaacagaag
aagaaagagaacaaagagaacaaggaaaaacagacaagcactaagaaagaaaaggaaagt
gacaaagagaaaaagaagtcaaaagacaaaaaggagaagcctaaaggtagtgaagccaaa
tctggaagcaaagggaagaggtcgcaaggtcctgtccacattaccgcaggcagcgaaccc
atccccattggagaagatgaggatgacgacctggaccaggagacattcagcatatgcaag
gaaaggatgagaccagtcaaaaaagccctgaagcagcttgacaagcctgataagggactg
acagttcaagagcagctggagcacacacgcaactgcctcctaaagattggggaccgcatc
tctgagtgccttaaagcctacagtgaccaggatcatatcaagctatggagaaggaaccta
tggatatttgtgtccaaattcacagaatttgatgccagaaaactgcacaaactctacaag
atggctcacaagaaaagatcacaggaagaggaggagcaaaagaagaaggaggacatgtcc
agcatgaagaagccgttccgcccggagccttcgggctccagccgcgactctgtgatgtcc
cagtctcacgtgcctcacaaccctcactcccagaagatccacctgcccccctcccacgcc
cagcagcagatgcacgggcacccacgggacaactacggccatccaaacaagaggcatttc
agcaacgcagaccgaggagaatggcagagggatcgaaagttcaactacggcggcaacagc
aaccagatgtggggcggggagcggcaccaccagtacgagcagcactggtacaaggaccac
cactacggggaccggcgctcccgcggggagccccaccgcagctcgggcaactaccgacca
aacaacctctcccgcaagaggccctacgagcagtacaacagcgaccgagaccacaggggc
caccgggactactacgacaggcaccaccacgactccaagcgtcgacggtccgacgagttc
aggccccagaactaccaccagcaggacttccggcggatgtctgaccacaggccgcccatg
ggctaccatgggcagggaccctcggaccactaccggtccttccacacagacaaatcggca
gattacaaacagccgctccctccgcctcactctgccatgtcggaccctcgctctcccccc
tctcagaaatccccccacgactccaagtcacctctggatcacaggtcacctctggacagg
tccttggaacagaaaaacaacccagactataactggaacgtaaggaaagcgtag
DBGET
integrated database retrieval system
