Dryobates pubescens (Downy woodpecker): 104299054
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Entry
104299054 CDS
T08526
Symbol
RARS
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104299054 (RARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpub01007
]
104299054 (RARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpub03016
]
104299054 (RARS)
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104299054 (RARS)
Enzymes [BR:
dpub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
104299054 (RARS)
Amino acid related enzymes [BR:
dpub01007
]
Aminoacyl-tRNA synthetase
Class I (G)
104299054 (RARS)
Transfer RNA biogenesis [BR:
dpub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104299054 (RARS)
Prokaryotic type
Other AARSs
104299054 (RARS)
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
104299054 (RARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
tRNA-synt_1
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
104299054
NCBI-ProteinID:
XP_009897495
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MCDLLKTFFQENEIKLLTAEIERLKNFGCLGVSPSLEGLRDENAKLKYRLNFLRKSLQEE
RSKTAKSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQPKFGDYQCNSAMGITQIL
LKTKEQKVSPREIAEKISKNIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLLMNGVQ
PPAVGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWGTQ
FGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQSKNPDF
IKAWELICDVSRKEFQKIYKCLDITLIERGESFYHDMMKDIVKEFEDKGFVQVDDGRKIV
FVPGFPVPLTIMKSDGGYTYDTSDLAALKHRLYEEKADILIYVVDSGQSVHLQTVFAAGQ
MIGWYDPKVTRVAHAAFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDKLKDKERDK
VLTAEELKAAQTSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYAFTRIRAI
ARLANIDEQMLRKAAREEVLILDHEKEWKLGKCILRFPEILQKILEDLLLHTLCDYLYEL
ATTFTEFYDNCYCVEKDRQSGQIVKVNMWRLLLCEATATVMAKGFDILGIKPVQRM
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaccttctaaagacctttttccaggaaaacgagatcaagttgctaactgcagaa
atcgagcgtctgaagaactttggatgcttgggagtctccccaagtttggaagggctgcga
gacgaaaacgcgaagcttaagtaccgcttaaacttccttcgaaagagccttcaagaggaa
agaagcaaaacagccaaaagcatgattaatatcaacagctgtcttcaggagatctttgga
gctgctattcaggctgcctacccagatttagaaaaccctccactagtggtgacacccagt
cagcagcccaaatttggggattaccagtgtaacagcgccatgggcataacacagattctg
ctcaaaaccaaggagcagaaggttagcccaagagaaattgcagagaaaatatcaaaaaac
attcctgccaacgaatgcattgagaaggttgaaatcgccggtcctggttttatcaatgtc
cacctgagaaaggattttgtgtcaaagcagctgagcagtttattgatgaatggagttcag
ccaccagctgttggcaaaaggaaaaaggtggtggtggatttctcatcccccaacattgca
aaggagatgcatgttggccacctgcgctctactatcattggagaaagtatgtgccggctc
ttcgaattcgcaggttatgatgttttgaggttaaaccatttaggagattggggcacccag
tttggaatgctcattgctcacctccaagacaaatttccagattacctgactgtttctcct
cccatcggggacctccaggctttttacaaggaatccaagaggaggtttgacacagaagag
gagttcaagaaacgtgcataccaatgtgtggtgctgctgcagagcaaaaacccagacttc
attaaggcgtgggaactgatctgtgacgtgtcgcggaaagagttccagaaaatctacaag
tgcttggacatcacactcatagagagaggagaatcattctaccatgacatgatgaaagac
attgtgaaagaatttgaagataaaggatttgtccaggttgatgatggccgaaagatcgtc
tttgtcccaggcttccctgtgccgttgacaatcatgaagtcagatggaggttacacctat
gacacgtctgacttggctgctcttaaacacaggctgtatgaagagaaggctgacatcctt
atttacgttgttgacagtggccagtcggtgcatttacaaacagtgtttgcagctggacag
atgatcggctggtacgatcccaaagtaaccagagtggcccatgctgcctttggagtggtg
ctgggagaagacaagaagaagttcaaaactcgctcaggggatacggtgcgtctcatagac
ctgctggaagaagggctgaaacgagctatggacaagctgaaggacaaggaacgggacaag
gtcctcacagcagaagagctgaaggctgcccagacatcagtcgcttttgggtgcattaaa
tacgcagacctgtcccacaacagactgaacgactacgtgttctcctttgacaagatgctg
gacgaccgaggaaacacagctgcctacttgctgtacgccttcacacggatcagggctatt
gctcgcctggccaatattgatgagcaaatgctgcggaaagcagccagggaggaggtgctc
atccttgaccacgagaaggaatggaaactgggcaagtgcatcctgaggttccctgagatc
ctgcagaagatactggaggacttgttattgcacacactttgtgactacctttatgagctg
gccaccaccttcaccgagttctatgacaactgctactgcgttgagaaggacagacagagt
ggtcagatcgtgaaggtgaacatgtggaggctactgctgtgcgaagccactgccaccgtc
atggccaagggattcgacatcctgggtattaagcctgtgcagaggatgtaa
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integrated database retrieval system
