Dryobates pubescens (Downy woodpecker): 104299146
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Entry
104299146 CDS
T08526
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104299146 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104299146 (CNGA1)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104299146 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
Ion_trans_2
Tim54
Menin
RNA_pol_Rpc4
Zip
CDC45
Rtf2
Sec62
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
104299146
NCBI-ProteinID:
XP_009897593
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MKVGVIETHHSHPIVPSVVVQDTSEDPGPVDRGEHRFPRPWYLPGALARYNINNNSNKDG
EKKKKKEKKSKSEKNKDGETQKPKEKKEKSKNKDKSKKKENKEEKKKDILIIDPAGNVYY
NWLFCITMPVMYNWTMIIARACFDELQHDYLVAWFIIDYISDAIYVADMFVRTRTGYLEQ
GLLVKEEQKLKEKYKTSFQFKLDFLSIIPTDLFYFKLGLNYPELRINRLLRVARMFEFFQ
RTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEFARLT
RKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAA
RAEFQAKIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIA
INVHLETLKKVRIFADCEAGLLVELVLKLRPQVYSPGDYICRKGDIGREMYIIKEGKLAV
VADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALT
EYPDAKAMLEEKGKQILMKDGLLDIEVANLGSDPKDLEEKVTYMERAMDRLQTKFARLLA
EYEAAQQKLKVRLTQIEKILKPVLEEEFADLEAADSSTDKPGVSKVE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtcattgagacccatcactcccatccaatcgttcccagtgtggtagtg
caagacaccagtgaggaccctggaccagtggacagaggggaacacaggttccccaggcca
tggtatctacctggtgcacttgcaagatacaatattaataacaatagcaataaagatgga
gagaagaaaaagaagaaagaaaagaagagcaagtcagaaaaaaataaggatggagaaaca
caaaagcccaaggagaaaaaggagaaaagcaaaaataaagataagtccaagaagaaagaa
aataaagaagagaagaagaaagatattctcattattgatccagcaggaaatgtgtattac
aactggttgttttgcatcacaatgcctgtcatgtacaactggaccatgattattgcaaga
gcctgttttgatgagcttcagcatgactacttagtggcctggtttattattgattacatt
tctgatgccatctatgttgctgacatgtttgtaaggactagaacgggttacctggaacaa
ggtcttctggtgaaagaagaacaaaagcttaaagaaaaatacaaaacatcttttcaattc
aaattagatttcctgtcaatcatcccaactgatctcttctactttaagttgggactgaat
tacccagagctccgaataaacagactgctcagagtcgctcggatgttcgaattcttccag
cgaacagaaacgaggacaaactacccaaatatcttcaggatctctaaccttgtcatgtac
attgtgataatcatccactggaatgcctgtgtctactactcaatctcaaaagccattgga
tttggggctgacacatgggtctaccccaacacctctgaccctgaatttgcccgtctgact
agaaaatatgtttacagtctctactggtccacactaaccctgactaccatcggtgaaaca
ccccctcctgtgagagactctgagtatttctttgtggttgtcgacttcttggttggagta
ttgatttttgccaccattgttggtaatgtaggctctatgatctccaacatgaatgctgct
agggcagagtttcaggcaaagattgatgctatcaagcagtatatgcacttccgcaacgtg
agcaaagacatggaaaaaagagttataaagtggtttgactacctgtggacaaacaaaaag
gctgtggatgaaagggaagtcttgaagtatctgccagataaactgagagcagagattgca
atcaatgttcacctggaaacgctgaagaaggtccggatttttgcagactgtgaagctggg
ctcttggtggaactggttctgaagctccggccgcaagtctacagccccggagattatatc
tgcaggaaaggagacattggacgagagatgtacatcattaaggaaggcaagctggcagtg
gttgctgatgatggaattacccagtttgtggtcctaagtgatgggagttactttggagaa
atcagcattcttaatatcaaaggtagcaaagctggcaatcgaaggacagccaatatcagg
agtattggatactcggacttgttttgtctgtctaaagatgacctcatggaggctttaaca
gagtatcctgatgcaaaggctatgctagaagaaaaaggcaagcaaatcctgatgaaagac
gggttgctggacattgaagttgcaaatctgggaagtgatcctaaagatctggaagagaag
gtcacctacatggaaagagcaatggacagattacaaacaaagtttgccaggctcttggct
gagtatgaagctgcccaacagaaactgaaagtaagacttacacagattgagaaaatattg
aagccagtgctagaggaagaatttgcagacttagaagcagcagattcatccacagacaaa
cccggagtgtcgaaagtggaataa
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