Dryobates pubescens (Downy woodpecker): 104299161
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Entry
104299161 CDS
T08526
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104299161 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104299161 (FIP1L1)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104299161 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
104299161
NCBI-ProteinID:
XP_009897607
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MGEDVPDEPAALPVIRGEGADGRLGMQKSARTSESGGDKEQEFLYADENEAEKPEEEKAS
VPPPPGSEEEAAENGVVKTKAAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYSYGAAPV
NLNIKTGGRAFASSGAKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNY
GFNEDTWKAYCEKQKRIRMGLEILPVTSATNKITAEDKAMEVRASAEILDGRYHLFKVQQ
GRTGNLEKELAVQSTKAEFTSPPALFKSGIPTNRRISGTIDVIGQSITISRVEGRRRANE
NSNIQVLSERSNPEVDNFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSSAPPLIPPPGIPI
TVPPPGFAPPPGGPPPSLIPTIDSGHPSGYDGRSVRAFSYGSVTFPHLAGSSPSWPSLMD
TSKQWDYYARREKDRERERERSRDRDRDRERERERTRDRERERDHSPTPSVFNSDEERYR
YRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHK
KSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggatgtcccagatgagcccgccgcgctgccggtgatccgtggtgagggggcg
gacgggcgtttggggatgcagaagagcgcaaggacctccgagagcggcggagacaaagag
caggagttcctttacgcagatgaaaatgaagcagagaaaccagaggaagaaaaagctagt
gttccacctccacctggaagtgaagaggaagcagcagaaaatggcgttgtaaaaacgaag
gcagcagaggctgaggatgacagtgatagcgatagcgatgatgatgaagacgatgttcaa
gtcaccataggggatattaaaacaggagctccacagtacagttatggagcagcacctgtg
aatctcaatataaagacaggaggacgagcttttgcatcttctggtgctaaggtgaaaggg
gtggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagatttagat
tcttttgaagataagccttggagaaagccaggggctgatctttctgattatttcaactat
ggcttcaatgaagatacctggaaagcttactgtgaaaaacagaaaagaatacgaatgggg
cttgaaattctcccagttacctcagccaccaataaaatcacggctgaagacaaagctatg
gaagtaagagcaagtgcagagattctcgatggcagataccatctttttaaggtacagcag
ggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaagctgagttcaca
tctcctcctgccttattcaaatcaggaatcccaacaaacaggagaatatctggcacaata
gatgtcatcggacagagcatcactatcagcagggtggaagggcgccggcgagctaacgag
aacagcaacatacaggttctttcagaacgatctaatcctgaagtagacaattttaccaag
ccacctccatttttccctccaggagctccacctacccaccttccaccacctcctttcctc
ccaccccctcctactgtcagttctgctccacctctgattcccccaccaggtatcccaata
acagtgccaccaccaggctttgcaccacctcctggcggccctccaccttccctcataccc
accatagacagtggccacccttctggctatgatggtcggtctgttcgtgcattttcctat
ggcagtgtcacctttccgcaccttgcaggttcctctccttcctggcctagcctcatggac
accagcaagcagtgggattactatgcacggagagagaaggacagggagcgagagagagag
cgatcccgagaccgggatcgggaccgggagcgggagcgagagcgtaccagggacagggag
agggagcgagaccacagcccgactcccagtgtcttcaacagtgatgaagaaagatacaga
tacagagactatgcagagagaggctacgaccgccacaggacgagcagggagaaggaagat
cgccacagagacaggaggcacagagagaaagaagagaccaggcacaagtcatctcgaagt
aacagcagacgtcgtcacgacagcgaggaaggggacagccacagaaggcacaagcacaaa
aagtccaaaagaagcaaagaagggaaggaagccagcggtgaacctgctccagagcaggag
aacactgaagctgcccctgtggaatag
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