KEGG   Dryobates pubescens (Downy woodpecker): 104299410
Entry
104299410         CDS       T08526                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104299410 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpub03400]
    104299410 (APTX)
Enzymes [BR:dpub01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     104299410 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     104299410 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     104299410 (APTX)
DNA repair and recombination proteins [BR:dpub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104299410 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     104299410 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_4 FHA zf-FCS DUF4926 FtsK_SpoIIIE_N Zf-C2H2_ZNF451_5th zf-C2H2
Other DBs
NCBI-GeneID: 104299410
NCBI-ProteinID: XP_009897872
LinkDB
Position
Unknown
AA seq 345 aa
MLVCWLVGKEECSQRMKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLVNIGKDEEVKMKPGQVLYVVNKLYPFMVEFAEESGKTAAEAENKMQTNKML
CEDSCEDEDVELVPRKRTKTEVVGTEGSSANPKLSKQEGTSSKKEHLGHWSQGLKSSMQD
PEMQVYKDEKAVVIKDKYPKARYHWLVLPWKPIPSLKSITRDHIELLEHMHAVGQRMIEQ
CPARQSLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSEDVIEMV
RSKGKVLVGDHVSECLKLPLRCHHCKQQLSTMPELKAHLMKHRPK
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcttgtatgctggcttgtggggaaggaggaatgcagtcagagaatgaagctgccacac
ctggaagccgtggtgattggtcgtggcccagagactgggataactgataagaagtgttca
cggcagcaagttcagttaaaagcagactgcaacaagggatatgttacagttaagcagata
ggagtcaacccaactagtgttgaccttgtgaatattggcaaggatgaagaggtgaaaatg
aagccaggccaagtgctgtatgttgtgaataaactttaccccttcatggtggaatttgct
gaagagtcagggaaaactgctgcagaagcagaaaacaaaatgcaaaccaacaagatgctg
tgtgaggactcctgtgaggatgaggatgttgagcttgtgcccagaaagagaacgaagacg
gaggtggtgggtacagaaggcagctctgcaaatcccaagctaagcaaacaggaaggaact
tccagcaaaaaggaacatttaggacactggagtcaaggactgaagagctccatgcaggat
ccagaaatgcaggtttacaaagatgaaaaggccgtggtcatcaaggacaaatatcccaaa
gcacgttaccactggcttgtcttaccatggaagcccattccaagcctgaagtcaattacc
agggaccacattgaactgctggaacacatgcatgcagttgggcaaagaatgattgaacag
tgccctgccagacagagtctggagttcagactgggttaccatgctatccccagtatgagt
cagctgcatttgcatgtcatcagccaggatttcgattctccagctctgaagaccaaaaag
cactggaactctttcactacagactacttcttgaactctgaagatgtgatagagatggtc
agaagcaaggggaaagtgctggtaggagatcacgtctctgaatgtctgaagttgcccctg
aggtgccatcactgcaaacaacagctctccactatgccagagttaaaggcacacctcatg
aaacacaggccaaaatga

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