Dryobates pubescens (Downy woodpecker): 104299455
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Entry
104299455 CDS
T08526
Symbol
EMG1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104299455 (EMG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104299455 (EMG1)
Enzymes [BR:
dpub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
104299455 (EMG1)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
90S particles
Other 90S particles
104299455 (EMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
C2c1_helical_1st
Motif
Other DBs
NCBI-GeneID:
104299455
NCBI-ProteinID:
XP_009897921
LinkDB
All DBs
Position
Unknown
AA seq
151 aa
AA seq
DB search
MLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQ
KLLKVIKNPVSDHLPVGCMKMGTSFAVPQVSDLRQLVPAAEPVAIVVGAFAHGSVSVDYT
EKMISISNYPLSAALTCAKITTAFEEAWGVV
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggacagcccactgaatcgggctggcctcctgcaggtttacatccacacccag
aagaatgttctaattgaagtaaatccccagactaggatcccaagaacttttgatcggttc
tgtggtctcatggttcagttgctgcacaagctcagtgttcgagcagctgatgggcctcag
aaactgctgaaggtgattaaaaacccagtgagtgatcacctccctgtgggctgtatgaag
atggggacctcttttgcagttccccaggtgtcagacctgcgtcagctggttcctgcagcg
gagccagtggccattgttgtgggagcttttgcccacggttcagtcagtgttgactacaca
gaaaagatgatctccatcagcaactatcccctctctgctgccttgacctgtgccaaaatt
actactgcctttgaggaagcctggggagtagtgtga
DBGET
integrated database retrieval system
