KEGG   Dryobates pubescens (Downy woodpecker): 104299577
Entry
104299577         CDS       T08526                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub04382  Cornified envelope formation
dpub04510  Focal adhesion
dpub04512  ECM-receptor interaction
dpub04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104299577 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104299577 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104299577 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104299577 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dpub04147]
    104299577 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:dpub00536]
    104299577 (COL4A5)
Exosome [BR:dpub04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104299577 (COL4A5)
Glycosaminoglycan binding proteins [BR:dpub00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104299577 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104299577
NCBI-ProteinID: XP_009898056
LinkDB
Position
Unknown
AA seq 1703 aa
MVLKIDGSWPSNEYPVLVRVKEYKLSKCALIFCFLVSFKACHGCTSLSKCDCSGVKGEKG
ERGFPGLEGQPGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGVRGPPGLPGFPGTPGLPG
LPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPG
QKGDQGFPGLPGIPGPPGSMGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGE
KGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEK
GEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGISGAPGRDGEKGEKGDTGPPGPPGIVISR
PGIDAAVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQK
GDQGLPGVSIPGEPGLDGPRGPPGPPGPPGPPAPSLPPGEGLCEQGPPGPPGIPGQQGFT
GERGQKGDQGDTCFNCIGTGITGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGP
PGFPGPPGAPGRPGPKGDPGDVLTSPRMKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPG
PKGEPGSVAFKGEMGIPGDPGIPGLPGEKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGV
PGPKGEPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGL
PGPPGPKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGIK
GVQGPKGDPGFPGNPGLPGRPGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPG
PPGPVGPPGLQGVPGEKGDPGPPGFDVPGPPGDRGAPGYPGPPGLPGPQGSPGPPGRDGI
PGFPGAKGEMGVMGAPGPPGPPGTPGRNGLPGLKGNNGLPGPPGSPGPVGQKGVKGEAGL
PGPPGKVDPKQLGAKGEKGEPGVPGVPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIK
GDMGLPGQPGPTGPPGLKGAMGEMGLPGPPGIKGSQGTAGRPGQPGPAGFPGLKGEKGDP
GPSSIGIRGLPGPKGDLGLPGYPGSPGSKGIAGSPGLPGLPGSPGAKGEPGLPGFPGTSG
IPGPKGIEGPPGSPGLPGPPGPVGDTGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPG
IGHPGPPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLE
GPKGSPGPPGVPGRPGPSGPPGPPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQ
GPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLP
GTIGRSIVVKGDPGPPGSPGQPGSKGPPGLPGPQGLPGPIGLPGDPGRDGLPGFDGPAGR
KGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSR
IYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTP
EPMPMSMEPLTGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPLGWDSLWIGYSFMMH
TSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQ
SETLKAGDLRTRISRCQVCMKKT
NT seq 5112 nt   +upstreamnt  +downstreamnt
atggttttgaaaattgatggctcatggccctccaatgagtatcctgtgttggtgagggtg
aaggaatataaactaagcaaatgtgcattaatattttgttttcttgtgtcttttaaggct
tgccatggatgtacatcgttgtccaaatgtgactgcagtggagtgaaaggtgaaaagggt
gaaagaggattcccaggcttggaaggacagccaggtttacctggatttccgggaccggaa
ggaccacctggtccaagaggctcaaagggtgatgatggacttccagggcctattggaccc
aaaggagtcagaggaccaccagggcttccaggatttccaggaacaccaggacttccagga
ctaccaggacaagatgggccaccaggacctcagggtatcccaggatgcaatggaacaaag
ggagagcgtggattcccaggcagcccaggttttcctggtttacaagggcctcctggaccc
cctggtctgccaggtatgaagggtgaagcaggtgaaataattacatccttgctaccagga
cagaagggtgaccaaggatttccaggtcttccagggatacctggtccacctggctctatg
ggaataccaggtccagttggtcctccagggcccccgggtttgacaggacctcctggtcca
ccagggctgccaggacctaagggtaatatgggtttgaatttccaaggacccaaaggtgaa
aaaggtgagcaaggtcttcaaggacctccagggccaccaggacaaattggagaacagaag
agaccaaatgacattgaatttcagaaaggagatcagggtatcccaggtgatccaggtcca
ccaggacttcctgggccacaaggccctcctggtcttcccggtggcgtaaaaggtgaaaaa
ggtgagcaaggagaaccaggaaaaagaggaaagcctggcaaagatggagaacctggtcag
cctggcagggatggtttacctggtgggcctggaatcagtggtgctccaggaagagatggt
gaaaagggtgaaaaaggtgacactggcccccctggtcctcctggaatcgtcatttccaga
ccaggcattgatgcagcagtgggaccgaaaggtagcaaaggattgccaggacttccagga
gccaaaggggagcgtggattctctggtaggccgggcccacctggcttgccaggttctcca
gggatcaccactgttggacctcctggcccacctggcttacctggtgaaagaggacagaaa
ggagatcaaggtttacctggtgtttccattcctggggaaccaggacttgatgggccacga
ggacctccaggaccaccaggtccaccaggtcccccagcaccatctcttcctcctggtgaa
gggttatgtgagcaagggccaccaggtcccccaggaattccaggacaacaaggctttact
ggggagcgaggccaaaaaggtgatcaaggagacacatgcttcaattgcataggaactgga
ataactgggcctcctggggagagaggaccaccaggacctccaggtagtccaggttctcct
ggttttcctggaccaaaaggtgaaaaggggcttcctggattaactggccttgtagggcca
ccaggattcccagggcccccaggtgctcctgggagacctggtcctaaaggagacccaggg
gatgtcctgacttctccaagaatgaaaggtgacaaaggagaccctggcttcccaggacct
ccaggtcttcctggcatagatggcactcctggacgagatggactgccaggtcttcctggc
ccaaagggggaacctggcagtgttgcattcaaaggagaaatgggaattccaggtgatcca
ggaataccaggtcttcctggagagaaaggactgcctggacctcctggttttggtccacaa
ggttcacctggtgaaaagggcatccaaggagtatcaggtcgtccaggacctcctggagtt
cctggtccaaaaggtgaacctggacagactattacagaaccaggagttcctggcccccct
ggtcctccaggaagaaatggtgacccaggtcttccaggagatcctggtcagccaggtcag
cgtggcttaccaggcatcccaggtgcaaagggagagccaggtatccctggcattggactg
ccaggcccgccaggcccaaaaggtttcccagggactccaggtcctcccggagctccagga
actccaggtcgccctggtctagatggacctccaggaccacctggtttcccaggacagaag
ggggatcgtggatttggagttccaggaccacctggacccccaggaccaccaggcataaaa
ggagttcaaggacctaaaggtgatcctggcttcccaggaaatcctggtctcccaggccgg
ccaggatttgatggaactccaggacccaaaggtgaccctggaccaagtggaccaccagga
ctcccaggcccaccgggcatccctggcattggtggtcaaggtccacctggatctccagga
cctccaggtcctgttgggcctccagggttgcagggtgttccaggggagaaaggagatcca
ggtcctccaggcttcgacgttcctggtcctccaggtgatcgaggagccccaggatatcca
ggaccccctggtctcccagggcctcagggttcacctggcccacctggccgggatggaata
cctggattcccaggtgccaaaggtgagatgggcgtcatgggagctcctggacctccaggg
cctccaggaacccctggaagaaatggcctgcctggcttgaaaggtaataatggattacct
ggtccaccaggatctcctggaccagttgggcaaaaaggtgtcaaaggtgaagcaggcctg
ccaggtccacctggaaaagttgatccaaaacagctaggagcaaaaggagaaaaaggcgag
ccaggtgttccaggtgtccctggtttatcaggacagaaaggttaccaaggtctcccaggt
gacccaggcccaccaggacttagtggcccaccaggtgtgcctggactgccaggcatcaaa
ggagacatggggcttcctgggcagccgggaccaacaggacctccagggttaaaaggtgcc
atgggagaaatgggccttccaggtcccccagggattaaaggcagccaaggaacagcagga
cgtccaggccagcctgggcctgcaggatttcctgggctgaaaggggagaaaggtgaccct
ggtccttccagcatcggtattcgtggtctccctggaccaaagggtgatcttggtttgcct
ggatacccaggtagtccaggcagtaaaggtatagctggaagtcctggtttgcctggactt
ccaggcagtccaggtgcaaaaggagaaccaggccttcctggattcccaggaacatcagga
attccaggaccaaaaggtattgaggggcctccaggtagccccggtctgcctggaccacct
ggaccagtaggtgatactggtcgtcctggcccccctggcccttcaggggagaaaggacag
cctggtcgagatggcatccctggaccagctggtcagaagggcgaaccaggtctaccaggc
attgggcacccaggacctccaggactcccaggattgtcaggacaaaaaggagaactggga
ttacctggcccaccggggccccctggactgccaggtctgaaaggagaaccaggtttccag
ggattccctggtctacagggtccaccaggtccaccaggattaccagggccacctctggaa
ggtcctaaaggtagccctggcccaccaggtgttccaggaagaccaggtccctcaggtcct
ccaggtccaccaggcccagaaggtccacgagggccaccaggcagtggaggacttaaaggg
gaaaaagggaacccaggtcaacctggcccacctggcctgacagggcaaaagggagatcaa
ggaccacctggacgccagggggatcctggtcgtccaggtctgaatggaatgaagggtgac
cccggtgttccaggtgttccaggattcccaggtatgaagggtcccactggacctgcagga
ccagctggcctcacaggcagtcaagggctgccaggcccaccaggcccaccaggtttgcca
ggtaccattggacgaagcattgttgtcaaaggtgaccctggtcccccaggttctccagga
cagccagggtcaaaagggccacctggactgccagggccacagggattgccaggcccaatt
ggtcttcctggtgacccagggcgagatggactaccaggttttgatggcccagcaggacga
aaaggagaaagaggtcttccaggccagccaggttcacgaggcatacagggacctcctggt
cctgatggcttacaaggcccacctggtcctcctggaacagcttctgttgctcatggattc
cttataactcggcacagccaaaccagggatacaccactgtgtccacaaggaacatcaagg
atctatgatggattctctcttctgtatgtgcaaggaaatgagagagcacatggccaggat
ctaggtactgctgggagctgtcttagacgtttcagcacgatgcccttcatgttctgcaat
atcaacaacgtttgtaattttgcatcaaggaatgactattcctactggctgtcaactcca
gagccaatgccaatgagcatggagccactgactgggcaaagcatccagcccttcatcagc
cgatgtgttgtgtgtgaagctcctgctatggtgatagctgtccacagtcagaccattcag
attccttcatgtcctctaggctgggattccctctggattggttactccttcatgatgcac
accagtgctggagcagagggctctggacaggccttggcatcgcctggatcctgtttagaa
gaattccgctcagctccgtttatcgagtgccacggtcgtggtacttgtaattactacgcc
aattcatacagtttctggctggcaactgtagaggtgtcagaaatgttcagcaaacctcag
tcagagacactgaaagctggagacttgaggacacggattagtcgttgtcaagtttgcatg
aagaagacgtaa

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