Dryobates pubescens (Downy woodpecker): 104299771
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Entry
104299771 CDS
T08526
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03022
Basal transcription factors
dpub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104299771 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
104299771 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104299771 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104299771 (GTF2H1)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104299771 (GTF2H1)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104299771 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
104299771
NCBI-ProteinID:
XP_009898264
UniProt:
A0A093G9W8
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMMEKEFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKTMVSQGVKNPLIDLTALDDKSLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPMKKVKLQEAIEY
EDLTKNDSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFNSIRQEMEAYVPKLTQ
VLSSSDAASTIAALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKLQKQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRLLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaagaagtcttactgattgtaaagaaggttcgtcagaagaagcag
gatggagctctctaccttatggctgaaaggatcgcatgggcacctgaaggcaaggaccga
ttcacagtcagccatatgtatgcagacatcaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggagcgagatgcagtaaaggatcttcttcaacagctgttg
cccaagttcaaaaggaaagctaacaaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaacgcaggggataattctgcggcacctagcaag
caggatgtgggcatctctgcagcgttcctggctgacgttcggcctcaaaccgacggctgc
aacggtctgaggtacaacttgacttcagatatcattgaatccatattccggacataccct
gcagtcaaaatgaaatatgcagaaaatgttccacataacatgatggagaaggaattctgg
acacgattttttcagtctcattacttccaccgggacaggctcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgaaaaaggtttaaaaacgatggtgtcccaagga
gtgaaaaaccccctgatagatttaacagctttggatgataaatcattagatgaaggctat
ggtgttgcttcagtggcctctacatcaaatgcctccaaatccgctcgagaaagtagcaac
gctgccattatcaaacgctttaatcatcacagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccaatgaaaaaggtgaaactgcaggaggccattgaatat
gaagatttaacaaagaacgatagcgttaaaactattgcactaaacttaaagaagtctgat
aggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attaattcttttaatagtattaggcaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtagtgatgctgctagcactattgcagccctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacattcagtctgaa
ctgaaacacttgtacgtggcagtaggggagctgctacgacacttctggtcctgctttcct
gttaacacaccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaaacttcagaaacagtatttaagcacaaat
ctggtaagtcatatagaagagatgctgcagacagcctacaacaagttccacacgtggcag
tcccggcgcctgctgaagaagacgtga
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