Dryobates pubescens (Downy woodpecker): 104299814
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Entry
104299814 CDS
T08526
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104299814 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104299814 (NUP160)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104299814 (NUP160)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104299814 (NUP160)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104299814 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TTC22_C
TPR_1
Motif
Other DBs
NCBI-GeneID:
104299814
NCBI-ProteinID:
XP_009898309
LinkDB
All DBs
Position
Unknown
AA seq
1342 aa
AA seq
DB search
MVSVGPGTGLVVETTSGDTVELVEESLDVNLLNNAVRLCIRGCPFLPGGVHFCELQSHLV
ILLITGQTVHRLFLPHPARMYRSELITESPMQSVFTDFGKIDFRDPCSYCTIPNVPGLAP
NSVASAAWLSSEGEALFALPSASGGIFVLKLPPHDAPGTVSVVELKQSSVMQRLLTGWMP
TAIRGDCGPSDLPVSLSVHCLEHDAFLFALCQDHKLRMWSYKDQMCLMVADLLEFVPVSR
DLRLAAGTGHRLRLAFSQSLGLYLGVYMHAPKRGQFCVFQLVSTESSRYSLDHISSLFSS
QETLVDFALTSAEIWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVTVRHDQD
PRETYLEYLFMPGRFSNAAIQKALQIFSQGTERHMDLTWDELKKEVTLAVENEFQGSVTE
YECSPEEFWQLQVEFWSKFYACCLQYQEAISRPLVLLLNPYTSMACLLKKGSVSFLMPCP
WVDHLYLLSNEHLLTEDDAAIFDDLEMSRDVVCLVQCLRLIGESISMDMAFSMEMACSLL
QPPEKAAEQILEDLIANDTENVLEEIHSKLQEIRNPIHAIGVLIREMDYEMDTDMERGEN
PAPHLNLQLNLSQLYGSGTAGGVLCWGVCKIATIRFLICRDLLILQQLLLRLGDPMVLGG
GQLFQSQQDLLHRTSPLLLSYYLIRWASQRLASDVPVDTLESNLQHLSVLELADTAAVTP
HRLVSSPQTIVELFFQEVARKHIISRLFLQPNTSLAETSLNWPHLVTAIVADFLPLLWPS
NPGFLFPECLMGSCQYTQLQEYIRLLQPWCHVNMGSCCFMMGRCYLVMGEGHKALDCFRQ
AASEVGREEFLDRLIQPEEGEVVSTPRLQYYNKVLRLLDMVGLPELVIQLATLAIMESDD
WRSQATLRTCIFKHHLDLGHNNEAYVALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEF
PYINLHNEVVGIIESHARAVDLMNHNYYELLYAFHIYRHNYRKAGTVMFEYGTRLGREVR
TLRGLQKQGNCFLAALNCLRLIRPEYAWIVQPAPGAVYERPGASPKRSHDGECAAVPTSH
QIEILELEDLERECVLARIRLTLVQHDLSTAAVAGNSTPEETVALLIRAGLFDTAITLCQ
TFKLSLTPVFEGLTFKCIQLQLGGEAAQAEAWEWLAANQLSSLVTTKECSATDEAWRLLS
SYLERYPSQNSLYHCCVINKLLAHGIPLPNWLINSYKKVDAAELLRLYLNYNLLEEAVDL
VLEYVDAVLGKGHRYFGMELPLSATAPMVWLPYTAIDQLLQALQGSTTNHYSVVLYQKLN
DKMEAYQQKVNVVTRDNLYRRN
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcgtgggcccggggacaggcctagttgtggagaccacatcgggagacactgtg
gagctggtggaagaatctttggatgtcaacctccttaacaacgccgtccgcctctgtatc
cgaggctgcccgtttctgccggggggtgtgcacttctgcgagctgcagagccacttggtc
atcctcctgatcaccgggcagaccgttcatcgtctgttcctgccgcatcccgcccgaatg
taccgcagtgagctgatcacagagagcccaatgcagtctgtgttcacagattttggcaag
attgacttcagagatccttgcagctactgcaccatccccaacgtgccagggctggccccc
aactcggtcgcctcggctgcgtggctgagcagcgagggggaagctctctttgctctgccc
tcagcatctggagggatctttgtccttaagctgcctcctcatgatgcacctggcacggtt
tcggtggtggagctgaagcagagctcggtgatgcagcgtctcctgaccggctggatgccc
actgccatcagaggtgactgtggcccctccgacctgcctgtcagcctctcggtgcactgc
ctggagcatgatgccttcctctttgccctctgccaggaccataaacttcggatgtggtcc
tacaaggatcagatgtgcctgatggttgcagacctgctggagttcgtgcctgtcagcagg
gacctgcggctcgcagctgggaccggccaccgcctgcgactggccttctcccagtccctg
gggctttacctgggtgtctacatgcatgcacccaagaggggacagttttgtgtcttccag
ctggtgagcaccgagagcagccgctacagcctggaccacatttcctccctcttctcctcc
caggagactcttgttgactttgccttaacctcggccgagatctgggcgctgtggcacaat
gaggagaaccaaacggttgtgaaatacatcaactttgagcaaaacgtggcaggccagtgg
aaccaggtctttgtgcagcctctgcctgaggaggaggtgacagttcgacacgatcaggac
cccagggagacctacctggagtatctcttcatgcccgggcgcttcagcaacgctgctatc
cagaaggctctgcagatcttttctcaaggaaccgagaggcacatggatctgacatgggat
gagttaaaaaaggaggttaccttggctgtggaaaatgagttccagggcagtgtgacagag
tatgagtgctcaccagaggagttctggcagctgcaggtggagttctggtccaagttctac
gcctgctgccttcagtaccaggaagcaatctcacggcctctggtcctgctcttgaaccct
tacaccagcatggcttgcctgctgaagaagggctctgtgtctttcctcatgccctgtccc
tgggtggaccatctctatctcctctccaatgagcacctcctgactgaggatgatgctgct
atctttgatgatttggagatgtctcgtgatgttgtctgtcttgtccagtgccttcgcctg
atcggggaatcaatttccatggacatggccttcagcatggaaatggcctgctccctcctc
cagcctccagaaaaggctgcagagcagatcctggaggacttgatagctaatgacacggaa
aatgtgctggaggagatccacagcaagctgcaggagatcaggaaccccatccatgccatt
ggggtgctcatccgagagatggactatgagatggacaccgacatggagagaggtgaaaat
ccagctcctcacctgaacctgcagctgaacctgagccagctgtacggcagcggcacggct
ggcggcgtgctgtgctggggggtctgtaagattgccaccatccgcttcctcatctgccgg
gacctgctgatcctccagcagctcttgctgaggctgggagatcctatggttttgggaggg
ggccaactcttccagtctcagcaggacctgctgcaccgcacctctcccctcctgctctcc
tactacctgatcaggtgggcgagccagcgcctggcctcggacgtccccgtcgacacgctg
gaatctaatctgcagcatctctctgtgctggagttagcagacaccgctgctgttacaccc
cataggctagtatccagtcctcaaacaattgtggagctgtttttccaggaagtggccaga
aaacacatcatctccagactcttcctgcagccaaacacctctttggctgaaacaagtttg
aactggccccatctggttactgccatcgtggctgattttctgcctctcctgtggcccagc
aatcctggattcctcttccctgagtgcctgatgggaagctgtcagtacacccagctacag
gaatacattcgcctgctgcagccctggtgccacgtgaacatgggctcctgctgcttcatg
atgggccggtgctacctggtcatgggtgagggccacaaggctttggactgtttccgccaa
gctgcctcagaggtggggagagaggagttcttggacaggctgatccaacctgaggagggt
gaggtggtctccaccccgcgcctgcagtactacaacaaggttctgcgcttgttggacatg
gtgggtttgccagagctggtcatccagctggccaccttggccatcatggaatcagatgac
tggagaagccaggcaactttgaggacttgtatcttcaaacatcacttggatttaggacac
aacaatgaagcatatgtggccttaacacaaaacccggacccaagcaggcagctggactgt
ctacgccagctagtggtggttctctgcgagcgctcccagctccaggacctggtggagttc
ccctacatcaacctccacaatgaggtggtggggatcatcgagtcccacgcccgggcagtg
gacctgatgaaccacaactactacgagctgctctacgccttccacatctaccgccacaac
taccgcaaggctgggacggtgatgttcgagtacggcacgcgcctgggccgggaggtgcgg
acgctgcggggcctccagaagcaggggaactgtttccttgctgctctcaactgcctccgc
ttgatccgccctgagtacgcctggatagtgcagccggctcctggagctgtgtatgaacgt
cctggagcatcaccaaagagaagccacgacggggagtgtgcagctgttccaacttctcac
caaattgagatcctggagctggaggatctggagagggaatgtgtgctggcgcggatccgg
ctgaccctggtgcagcacgacctgtccacagcagcggtggcaggaaactctacccctgaa
gaaacggttgccctcctgatccgggccggcctcttcgacaccgccatcaccctgtgccag
accttcaagctgtccttgacaccagtctttgagggactcaccttcaagtgcatccagctg
cagctgggaggggaggcagcacaggcagaggcctgggaatggcttgcagcaaaccagctc
tcatcactggttaccaccaaggagtgcagtgccacggacgaagcttggcggctgctgtcg
tcctacctggagcgctacccatcccagaacagtctgtaccattgctgcgtcatcaacaag
ctcttggcacatggcatccccctgcccaactggctcatcaacagctacaagaaggtggat
gctgctgagctgctgcgtctctatctgaattacaatctgctggaggaagcagtggacttg
gtcctggagtatgtggatgctgtgctaggcaagggacatcgctattttggaatggagctt
cccctttctgctacggcccccatggtgtggctgccctacactgccatcgaccagcttctc
caggctctgcaggggagcaccaccaaccactacagcgttgtgctctaccagaagctgaat
gataagatggaggcctaccagcagaaggtcaacgtggtcacccgtgataacctgtaccgc
cgcaactag
DBGET
integrated database retrieval system
