Dryobates pubescens (Downy woodpecker): 104299871
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Entry
104299871 CDS
T08526
Symbol
EPRS
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub00860
Porphyrin metabolism
dpub00970
Aminoacyl-tRNA biosynthesis
dpub01100
Metabolic pathways
dpub01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
104299871 (EPRS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104299871 (EPRS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpub01007
]
104299871 (EPRS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpub03016
]
104299871 (EPRS)
Enzymes [BR:
dpub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
104299871 (EPRS)
6.1.1.17 glutamate---tRNA ligase
104299871 (EPRS)
Amino acid related enzymes [BR:
dpub01007
]
Aminoacyl-tRNA synthetase
Class I (A)
104299871 (EPRS)
Transfer RNA biogenesis [BR:
dpub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104299871 (EPRS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
HGTP_anticodon
tRNA-synt_2b
ProRS-C_1
tRNA-synt_1c_C
tRNA-synt_1c_C2
Arc1p_N_like
GST_C_2
GST_C
tRNA-synt_1e
GST_C_3
Motif
Other DBs
NCBI-GeneID:
104299871
NCBI-ProteinID:
XP_009898372
LinkDB
All DBs
Position
Unknown
AA seq
1675 aa
AA seq
DB search
MAVLSLTVNAGSPPLGALLTVEHVKNDLEISVEEGKETILRVSEHVSFTDVNSIARYLAR
VAGSAGLYGLNLLEHTEIDHWLEFSATKLSTASQFLSAVQELNHCLSLRTYLVGNSLSLA
DLCVWAVLKDSNVWQEQLEQNKAPVHAKRWYGFLEVQPAFQSVGAKWPSGAPKVKMATEK
KADVGKFVELPGAEMGKVIVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTN
PEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPAEQMK
AEREQRVESKHRNNCVNKNLQMWEEMKKGTEYGQTCCLRAKIDMSSNNGCMRDPTLYRCK
NQPHPRTGNTYKVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGIRKPYI
WEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGS
SRSVVNMEWDKIWSFNKKVIDPVAPRYTALLKDAVVPVNIPEAQEEMKEVAKHPKNADVG
LKPVWYGSRVLIDGADAETLTEGEVVTFINWGNIVITKLNRNASGKIVSIDAKLNLDNKD
FKKTTKITWLAETPRAPLIPTVCVNYEHLITKPVLGKDEDFKQYINQNSKQEELMLGDPC
LRDLKKGDIIQLQRRGFYICDQPYEPVSPYSCKDAPCILIYIPDGHTKEMPTSGSKEKTK
AETAKKEASSSVKGKSSSVVSDTSAPTCTPSEGHLVIYNKVSAQGDIVRDLKAKKAPKED
IDKAVKQLLALKAEYKEKTGQEYKPGNPPVSVTEQSSKLQMSGTLDSRALYDKVAEQGEV
VRKLKAEKAPKDKIGAAVEVLLALKAEYKQQTGQEYKPGSPPVALVPPQSSVSVLPSPCP
VDNKSLYSKVAEQGEMVRRLKSEKASKEQIDEAVKILLNLKAEYKQKTGQEYKPGNPPSA
PACVFPTTLPSSGCCNNLAPCSLVDGKALYDNVAEQGEVVRRLKAEKASKDEIDEAVKLL
LSLKADYKEKTGQDYKPGHPPAAQGALPQASNTVSSGPETPEAKALFSKVALQGDEVRRL
KSEKAEKEKIDAAVKELLQLKAQYKSVAGVEYKPITASGADDKDKKKKEKDNKSEKQSKQ
QKQNDGPKKDSLQGQSGNELSSSGSGEGQGPKKQTRLGLEAKKEENLADWFSQVITKSEM
IEYYDVSGCYVLRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQAALEKEKTHIADF
APEVAWVTKSGKTDLAEPIAIRPTSETVMYPVYAKWVQSHRDLPIKLNQWCNVVRWEFKH
PQPFLRTREFLWQEGHTAFATYEEAAEEVMQILDLYAQVYEDLLAIPVVKGRKTEKEKFA
GGDYTTTVEAFISASGRAIQGATSHHLGQNFSKMFEIVFEDPKKPGEKQFAYQNSWGITT
RTIGVMTMIHGDNMGLVLPPRVACVQVVIIPCGITNSLSEEDREALLKKCNEYRNRLLAA
NIRVRADLRDNYSPGWKFNHWELKGVPVRVEVGPRDMKSQQFVAVRRDTGQKLTFSEREA
EDKLKQILEEIHANLYKRASEDLKSHMVVANTMEDFQKELDLGKIVQIPFCGEIDCEDWI
KKTTARDQDLEPGAPSMGAKSLCIPFQPLRELQCGARCVCGKNPAKFYTLFGRSY
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcttgagcctcactgtcaacgcggggagccccccgctcggagctcttctgaca
gtggagcacgtgaagaatgatcttgaaatttcagtggaagaaggcaaagaaaccatcctt
cgtgtgtctgagcatgtttcatttactgatgtgaattcaatagctcgttatctggctaga
gttgctggttctgctgggttgtatggtttgaacctgttggaacacactgagattgaccat
tggctggagtttagtgctacaaagttatctacagccagccagtttctgtcagcggtccaa
gagctcaaccactgcctgtctctaagaacatacttggtgggaaactccctgagtcttgca
gacttgtgtgtctgggctgtactaaaagatagtaacgtatggcaagagcaattggaacaa
aacaaagctcctgtccatgcaaagcggtggtatggctttcttgaggtacagcctgctttt
cagtcagtaggagccaagtggccttctggtgcaccaaaagttaaaatggcaacagaaaag
aaagcagatgttgggaagtttgttgagcttcctggtgcagagatgggaaaggtcattgta
aggtttcctcctgaagcaagtgggtatctgcatatcggtcatgccaaagctgccctgctg
aatcagcactaccaagttaactttaaaggaaaacttataatgaggtttgatgacacaaat
ccagaaaaagagaaagaagactttgaaaaggttattcttgaagatgttgcaatgctgcac
atcaaaccagatcaatttacatatacctcagatcactttgaaacaataatgaaatatgct
gagaagcttattcaagaagggaaggcatatgtggatgacactcctgcagagcaaatgaag
gcagagcgtgagcaaagagtggaatctaaacacagaaataactgtgttaataagaatctg
caaatgtgggaagaaatgaaaaagggaacagaatatggacaaacttgttgtctacgagca
aaaatagatatgagtagtaacaatggatgtatgagggatccgactctttatcgttgcaaa
aaccagcctcacccacgtactggaaatacctacaaggtttatcccacgtatgactttgcc
tgccccattgttgacagtattgaaggtgtcacacatgcactgagaacaactgaataccac
gacagagatgaacaattctactggatcattgaggcactgggcataaggaagccctatata
tgggagtacagccggctaaacctcaacaacactgtgctctccaagagaaagcttacgtgg
tttgtcaacgaagggcttgtggatggatgggatgacccacgatttcccaccgtgcgtggt
gtcctaagaagaggcatgacagttgaagggctgaaacagtttattgctgctcagggctcc
tctcgatctgttgtgaatatggagtgggataaaatctggtcctttaacaaaaaggttata
gatccagtagcacctcgctacactgcattgctgaaagatgcggtggtcccagtaaatatt
cctgaagctcaagaggagatgaaggaagtggctaaacatccaaagaatgctgatgttggc
ttgaaacctgtgtggtatggctccagagtcctgatagatggtgcagatgcagagaccttg
actgagggagaggtggttacattcataaattggggcaatattgtcatcaccaagttaaac
agaaatgccagtgggaagattgtgtccatcgatgccaagttgaacttagacaataaggac
ttcaaaaaaactactaagatcacttggttagcagaaactccacgtgcaccactcatccca
actgtctgtgttaattatgagcatctgattactaagccagttctaggtaaagatgaagac
ttcaagcaatatatcaaccaaaatagcaagcaagaagaactgatgttaggtgatccgtgc
cttagggacttaaaaaaaggggacatcatccagcttcagaggagaggattttatatttgt
gatcagccctatgagccagtgagtccttacagctgtaaagatgccccatgcattttgatt
tacatccctgacgggcatactaaggaaatgccaacatctgggtcaaaagagaagaccaaa
gctgaaactgcaaagaaagaggctagttcatctgtaaaaggaaaatcttcttcagttgtt
agtgatacctcagctccaacttgtactccatctgaaggtcacctggtgatttacaacaag
gtgtccgcacagggtgatatagtcagagacttgaaagctaagaaggcaccaaaggaagat
attgataaggctgtgaaacagttgctggccttgaaagcagaatacaaagagaagacaggc
caggaatataagcctggaaatcctccagtatctgtaactgaacaatcttcaaagcttcag
atgtctgggaccctagacagcagagctctgtatgataaagtagcagagcaaggagaagtg
gtccgaaaactgaaagctgagaaagcacctaaggataagataggtgctgctgtggaagtc
cttctagccctaaaggcagaatataaacaacagacaggccaggagtacaaacctggaagc
ccacctgtggcccttgtgcctcctcaatcttctgtttctgttcttccatccccatgtcca
gtagacaacaaatctctctacagcaaagtagctgagcaaggcgaaatggtccgcaggctt
aaatcggagaaggcttcaaaggaacaaatagatgaggctgtgaaaattcttttaaatcta
aaagcagaatataaacaaaagacaggtcaagagtacaagcctggaaatccaccttcagct
cctgcttgtgtatttcctactacacttccatcttccggatgctgcaataacttggcaccc
tgtagcttagtggatggcaaagcactttatgataatgtagctgaacaaggggaagtggta
cgcagactcaaagcagagaaagcctccaaggatgaaatagatgaagcagtaaaactcctt
ctttctctaaaagctgactacaaggaaaagactgggcaggactacaagccaggacatcca
ccagcagctcaaggtgctttgcctcaggcatcaaacacagtatccagtggtccagagaca
cctgaagctaaagctctgtttagcaaggtggctcttcaaggagatgaagtcaggagactg
aagtcagaaaaagcagaaaaggaaaagatagatgcagctgtaaaagaacttcttcagttg
aaggcccagtataagtctgttgcaggagttgaatataaaccaattactgctagtggtgct
gatgacaaagacaagaagaagaaagagaaagacaacaagtctgaaaagcagagtaagcaa
cagaagcaaaatgatggcccaaagaaagactctttgcaaggacagagtggtaatgagctc
tcctcaagtggatcaggagagggtcaaggccctaagaaacaaaccaggctgggtctagaa
gctaaaaaagaagaaaatcttgcagactggttctctcaggtgatcacaaaatctgagatg
attgaatactatgacgtgagtggctgttatgttcttcgtccttgggcatatgctatttgg
gaagctatcaaggacttcttcgatgcagagatcaagaaacttggagtggaaaactgttac
ttccccatgtttgtgtctcaggctgccctagagaaagagaagacccatattgctgacttt
gctcctgaggttgcttgggtcacaaaatctggcaaaacagatctggctgaaccgattgct
atacgtcccacaagtgaaaccgttatgtatcctgtctatgcaaagtgggtgcagtcacac
agggatctacctatcaagcttaatcagtggtgcaatgttgtgcgctgggagttcaaacat
ccccaacctttccttcgcactcgtgagttcctgtggcaagagggtcacaccgcgtttgca
acgtatgaagaagcagcagaggaggtgatgcagatacttgatctctacgcccaagtgtac
gaagatctcctagcaatacctgttgtgaaaggaaggaagacagagaaggagaaattcgct
gggggtgattatacaaccactgtagaggcatttatatctgccagtggaagagctatccag
ggagcaacatcacatcacctagggcagaatttctcaaaaatgtttgaaattgtatttgaa
gatcccaagaaaccaggagagaaacagtttgcttatcagaattcctggggcattacaact
cgaactattggtgtcatgacaatgattcatggagataacatgggactggtgctcccacct
cgagtagcctgtgttcaggtggtaattattccctgtggtatcacaaattctctttctgaa
gaagacagagaggctttattgaagaaatgtaacgaatatcggaacaggctgcttgctgcc
aatatccgcgtacgagctgatttaagagacaactattcacctggttggaagttcaaccat
tgggaacttaagggtgttccagtcagggttgaggtgggaccacgagacatgaaaagccag
cagtttgtagctgtcagaagagacacaggacagaagctgaccttttctgaacgtgaagca
gaagacaaactgaaacagattttggaggagatccatgctaacctttacaagagagcttct
gaggacctaaaaagtcatatggtggtggcaaatactatggaggactttcaaaaagagctc
gatttaggaaagattgtgcaaatccctttttgtggggaaatcgattgcgaggactggatc
aagaagaccactgccagggatcaagaccttgagcctggtgccccctccatgggagcaaaa
agcctctgcatacctttccagcctctccgtgagctacagtgtggggcaagatgtgtctgt
ggcaaaaaccccgccaagttttacaccctgtttggtcgtagttactga
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integrated database retrieval system