Dryobates pubescens (Downy woodpecker): 104299895
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Entry
104299895 CDS
T08526
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104299895 (HDAC9)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104299895 (HDAC9)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104299895 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
104299895
NCBI-ProteinID:
XP_009898402
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MLQTIYESESCFSSDGVSGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MVPMVDPIMREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQELERHRREQQLPPLRGKERGRERAVASTEVKQKLQE
FLLSKSATKDSPANGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGASPPYKYTLPGAQDA
KDDFPLRKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGTASSFKKRLFEVTESSVSSSS
PGSGPSSPSNGPTSGMTENETSVLPSNIQAEHLVSQQRLLIQDESVNLLSLYTSPSLPNI
TLGLPAVQPPISASSSFKEKQKGDTQSLRQGVALAGQYGGNIPPSSSHPHVALEGKPNSS
HQALLQHLLLKEQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRAAHKLPRHRPLNRTQS
APLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPDSHLEEAEEELHG
DHSMQEEQAPTGGASVRAESSSAGVDDRIGQQVGAVKVKEEPPDSDEDVQTQQMESGEQA
AFMQQEFMAHRRVHQLQIYQAQMATVGMAGLDKHRSVSRTPSSPTDSTLPHPDVDQPSQH
VYTTGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEE
IQLVHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAG
AARMAVGCVIDVPAKVGSRRNENGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKL
NIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGYN
INIAWTGGLDPPMGDVEYLTAFRTVIMPAAHEFDPEIVLVSAGFDAVEGHDPPLGGYKVT
AKCFGHLTKELLKLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIP
NMNAIASLKKTTEIQSKYWKSVEPYSVPVDCALAESQKREREETETVSAMASLSVDVEQC
IPQEGSRAAGEPMEEEPAL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaccatttacgagagtgaatcgtgtttttcctcagatggggtttctggacgt
gaacagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtaaagtca
gaggttcccgtgggattagagcctatctcaccattagacttgcgaactgatctcaggatg
atggttcccatggtggacccaattatgcgtgaaaagcagctacagcaggaactacttctg
atccagcagcagcagcagattcagaaacaactgctgattgcagagtttcagaagcagcat
gaaaatctgacccgccagcatcaggcccagctccaggagcacataaagttacaacaggaa
ctcctagccattaaacaacagcaagaactccttgaaaaagagcagaaactggagcagcag
agacaagagcaggaactggaaaggcatcgcagggaacaacagcttcctcccctccgaggc
aaagaaagaggccgagaaagggcagtggcaagtacagaagtaaagcagaagcttcaagag
ttcctcttgagtaagtcggcaacaaaagactctccagcaaatgggaagaatcattccgtg
agccgccaccccaagctctggtacacggctgcccaccatacctcactggatcaaagctct
ccacccctgagtggggcctcgccaccgtacaaatacactttaccaggagcacaggatgcc
aaggatgattttccacttcgtaaaacagcttcagagcccaatctgaaggtacgttcaagg
ttaaaacaaaaggtgacagaaaggaggagcagtcctttgctcaggaggaaggatgggact
gccagttcattcaagaagcgactcttcgaggtgacagaatcctcagtcagtagcagttcc
cctggatcaggtcccagttctccaagcaatggcccaaccagtggtatgacagaaaatgaa
acctcagttttgccatctaacattcaagctgagcatctggtttcccagcaacgccttttg
atacaggatgagtcggtgaacttgttgagtctgtacacatccccttctctgcccaacatt
actttgggacttccagcagtgcaacctccaatcagtgcttcatcatcattcaaagaaaag
cagaagggagacacccagtcactcagacaaggagtggccttggctggacagtatggaggg
aacattcctccatcctcatctcatcctcatgttgctttggagggaaagccaaatagcagc
caccaagctctcttgcagcatctgttactgaaggaacaaatgagacagcaaaaacttctt
gtgactggagcagttcctcttcatccacaatctcctttagcagcaaaggagagagtctca
cctggcataagagctgcccacaaactgcctcgtcacaggccactgaatcgaacacagtca
gctcctcttcctcagagtactttagcccagctggtcatccagcagcaacatcaacaattt
ttggagaagcagaaacagtaccagcagcagatccacatgaataagatgctctctaagtcc
attgagcagctcaagcaacctgacagtcacctggaggaagctgaagaagagcttcatgga
gatcactcgatgcaagaagagcaagctcccaccggcggtgccagcgttagggctgagagc
agcagtgctggtgtggatgacagaataggacagcaggtgggggctgtgaaagttaaagag
gagccaccggacagtgatgaggatgttcaaacccagcaaatggaatctggggagcaagct
gcttttatgcaacaggagttcatggcacatcggcgtgtccaccagttgcaaatctaccag
gctcagatggctacagttggcatggcaggattagataaacatcggtcggtgtccaggacc
ccgtcttcccccacagattccacattacctcacccagacgtggaccagcccagccagcat
gtctacacaactggtgttgtgtatgacagtctgatgctgaagcaccagtgcatgtgtggc
aactatgctaatcaccctgaacatgctggaaggatccaaagcatctggtcaaggctgcaa
gaaactgggctgctaaacaagtgcgagcgaattcgaggtcgaaaagccagcctggaggaa
atacagctggttcactctgaacatcattcactgctgtatggcaccagccccctgaacagg
cagaagctggaccccaggaaactcctaggaaacgtgtctcaaaaactcttttccttgttg
ccttgtgggggacttggggtggacagtgacaccgtttggaacgagctgcactcggccggg
gcggcacgcatggcggtgggctgtgtcatcgatgttcctgcaaaggttggaagtaggaga
aatgaaaatggctttgctgttgtaaggcccccaggccatcatgctgaagaatcaacagcc
atggggttctgcttttttaattcgattgcaattactgccaaatacttgagagacaagcta
aatataggcaagatattgattgtagatctggatgttcaccatggcaacggtacacagcag
gctttttatgctgaccccagcatcctgtatgtttccctccatcgctatgatgaaggcaac
ttcttccccggcagtggagccccaaatgaggttggaagtggccctggtgaagggtataac
ataaatattgcttggacaggtggcttggatcctcctatgggtgatgttgagtatctcaca
gcattcaggactgtgattatgccagctgcccatgaatttgatccagagattgtcttggtg
tcagctggatttgatgctgtggaaggccatgaccctccgctgggcgggtacaaagtcaca
gctaaatgttttggccacctaaccaaggaattgctgaagctagcggacggccgtgttgtg
ctggcactggagggaggacatgaccttactgccatctgtgatgcatctgaagcatgtata
aatgcccttttaggaaatgagctggagcctctcccagaagatattgtgcaccaaatcccc
aatatgaatgcaatagcttctttaaaaaagaccaccgaaattcaaagcaagtactggaag
tcagtggagccatactcagtgccagtggactgtgctctggctgagtctcagaaacgagag
agagaggagacagaaactgtatctgctatggcctctctttcagtggatgttgagcagtgt
atccctcaggaaggcagcagagctgctggcgagcccatggaagaagagccagccttgtga
DBGET
integrated database retrieval system
