Dryobates pubescens (Downy woodpecker): 104299910
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Entry
104299910 CDS
T08526
Symbol
SPOP
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104299910 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104299910 (SPOP)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104299910 (SPOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
104299910
NCBI-ProteinID:
XP_009898423
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFKAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggtgccgagtcctcctcctccggcagagatgtcgagtgggcctgtagcagag
agctggtgctacactcagatcaaagtggtgaagttttcctacatgtggaccataaacaac
ttcagcttctgccgagaggaaatgggggaggtcatcaaaagctcaaccttttcatctgga
gccaatgataaactcaaatggtgtttgcgcgtcaaccccaagggcttggatgaagagagc
aaagattatctctccctctacctgttgctggtcagctgccccaaaagtgaagtccgagca
aagttcaagttctccatcctgaatgctaaaggagaagaaacaaaagcaatggagagccag
cgagcctatcgattcgtccagggcaaggactggggattcaaaaagttcattaggagagat
ttcctcttggatgaggccaatggactcctcccagatgacaaactcactctcttctgtgag
gtgagtgtggtgcaggactctgtcaatatctctggccagaacaccatgaacatggtgaag
gtcccggagtgccgcttggcagatgagctgggaggactctgggagaactcgcgcttcacg
gactgctgtctgtgcgttgcaggccaggagttcaaggctcacaaagccatcctagcagcg
cgttccccggttttcagcgccatgtttgagcatgagatggaagagagcaagaagaatcgg
gttgagatcaatgatgtggaacctgaagtgtttaaggaaatgatgtgctttatttacact
gggaaggcaccaaatcttgacaaaatggctgatgacttgctggcagctgctgacaagtac
gccctggagcgcctcaaggtgatgtgtgaggatgccctgtgcagcaacctgtccgtggag
aatgcagcagagatcctcatcctggctgacctccacagtgctgatcaactcaaaactcaa
gcagtggacttcattaactatcatgcttctgacgtgatggagacctcaggctggaagtcc
atggtggtgtcccatccccacttggtggccgaggcgtaccgctccttggcctccgcgcag
tgtcccttcctgggccctccacggaagcggctgaagcaatcctaa
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