KEGG   Dryobates pubescens (Downy woodpecker): 104300136
Entry
104300136         CDS       T08526                                 
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dpub04121]
    104300136 (RLIM)
Enzymes [BR:dpub01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104300136 (RLIM)
Ubiquitin system [BR:dpub04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104300136 (RLIM)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING-like zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 104300136
NCBI-ProteinID: XP_009898687
UniProt: A0A093GAW6
LinkDB
Position
Unknown
AA seq 595 aa
MESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESTEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSAEPSGGEELESSQSDSEIPRS
ESLSARQPGSERSTSEELATEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAP
RRSHHNTSSQTLDPSSVNEAEGSSRTRQHVTLRQHTAGIEVPGENAVLFSTPETRPAPQA
AGSSETNGSSESAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPNGPAPNQNVDASEAQNGGGGTSSNEGTDVSSGEVYEGGNEGSSTSGARR
EGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggaaagctcagattctagtgataaaggcagtattgatcaatcagaagcacaacgtcag
agccagctagatcggctggatcgagaagaagctttctatcagtttgtcaacaacctgagt
gaagaggactacaggcttatgagagacaacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccaccacagcaaaacagt
gatgagaatagaggtgcagagtccacagaagatgtttcaaatggagattccatcatagac
tggcttaattcagtccgacagactggaaatacaacacgaagcgggcaacgaggaaaccag
tcttggagagcggtgagccggactaacccaaacagtggcgacttcagattcagtttggaa
ataaacgtcaaccgtaataatgggaacacgaacccggaaactgagaacgagccatctgcg
gagccttccggtggggaggagttggaaagcagccaaagtgactctgaaattccaaggtct
gaatcactatctgcaaggcagcctggatcagaaaggagcacttcagaggagctagcaacc
gaggaagcttcccctcctagagggcagaggagagccagaagtaggagtccagaacagcgg
agaacgcgggctaggactgatagaagtaggtcaccaataaatccagtgagtgaagctcct
cgcaggtctcatcacaacacatcatctcaaacacttgacccctcctcagtgaatgaagct
gagggaagctctagaactaggcaacacgtgacattaaggcagcacacagcagggattgag
gtgcctggtgaaaatgccgttctcttttcgacccctgaaacaagacctgctcctcaagca
gcaggttcttcggaaaccaatggcagcagtgagtctgcagctcctgggcaaaggcctcct
accatagtacttgatcttcaagtgagaagagttcgtccaggggagtaccggcaaagagac
agcatagccaacagaactcgatccaggtcccagacccccaacaacacggtcacctacgag
agcgagcggggaggcttcaggcgcacgttttcccgttcggagcgggctggagtgagaact
tatgtcagcaccattaggattccaatccgtaggatcttaaacacaggcttgagtgagact
acatccgttgctattcagactatgctgaggcagatcatgacaggttttggagagctgagc
tacttcatgtatagtgatagtgatgcagatcctaacggcccagctccaaaccagaatgtg
gatgcttcggaggcacagaatggtggtggtgggacttcaagcaatgaaggcacagatgtt
agctcaggggaggtgtatgaaggtggtaacgaaggcagttccacctctggtgccagacgg
gaaggtcggaatacgaggggatcggtcacttttgaagaaagcggttctctaccgttcctt
agcctagcacagtttttcctactcaatgaagatgatgacgaccaaccaagaggactcacc
aaagaacaaattgacaacctagccatgaggaattttggtgagagcgatgctctgaaaacc
tgtagtgtctgtattacagagtacacggagggcaacaagctccgtaagctgccttgctcg
catgagtatcatgtccactgcatcgaccgctggttgtcagaaaattccacttgtcccatt
tgtcgcagagcagtcttagcttctgggaacagagagagcgttgtctaa

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