Dryobates pubescens (Downy woodpecker): 104300215 Help Entry 104300215         CDS       T08526                                  Symbol COL18A1 Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism dpub  Dryobates pubescens (Downy woodpecker) Brite KEGG Orthology (KO) [BR:dpub00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:dpub04147]     104300215 (COL18A1)    00535 Proteoglycans [BR:dpub00535]     104300215 (COL18A1)    00536 Glycosaminoglycan binding proteins [BR:dpub00536]     104300215 (COL18A1) Exosome [BR:dpub04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    104300215 (COL18A1) Proteoglycans [BR:dpub00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    104300215 (COL18A1) Glycosaminoglycan binding proteins [BR:dpub00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104300215 (COL18A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer Laminin_G_3 Motif Other DBs NCBI-GeneID:  104300215 NCBI-ProteinID:  XP_009898769 LinkDB All DBs Position Unknown AA seq 1528 aa AA seqDB search MGTPEPPALGFTEAPVYQYAVGDTLGAPGGGCFSGSLSCWSPPLPRSPDVASSSTENPQL LDAVTTKDPQLLGSGTAEDLQLLGTGTTKDPQLLGSGTTEDLQLLGTGAAKDLEILGTGT TEDTQLLGLGTIEDLQLLGTGTTKDPQLLELGTTKDLQLLGTGTTKDLQLLGMKNTEDLQ LLGTGTPVAMGTEVSLQRPAGPRPENLSTEVSLLELIGDPPPEEILKIYGPDNNPGYVFG PNANTGQVARYHLPSPFFRDFSILFHIQPTTPRAGVLFAITDSSQSIIYVGIKLSELRAG KQQIIFYYTEPGSPSSYVAATFTVPTLLNQWTRLAISVEEDEVVLYLDCEEHERFRFERS PDEMELEEGSGLFVAQAGGADPDKYQGVIADLKLLGDPRAAERQCEEEDDDAEEVSGDFG SGAEGGHQPLGKVGGVPGLVDAVPVTSPPVAVGSGPRTSGGSPQQAERTRAEETLQGSMG GTGPKGEKGEKGERGLKGDSGTGGIVRTGSVKGEKGEKGELGIKGSAGFGYPGSKGQKGE PGDPGPPGTLSQHSDGSMVEQVTGPPGPPGRDGAPGRDGEPGDPGEDGKPGDMGPQGFPG MPGEPGLKGEKGDPGMGPRGPPGPPGPPGPPGPSFKHDKLTFIDMEGSGFTGELETLRGP RGPPGPPGPPGVPGLPGEPGRFGMNHTDLPGPPGLPGRDGIPGPPGPVGLQGPPGRDGTP GQPGPKGERGDVGDLGLPGAPGPKGSKGEMGPPGAPGETGLAGLPGPIGPPGQPGPPGPP GPGYEAGFSDMEGSGLPFTVGSPGPRGPEGPQGVPGLPGVKGEVGSPGQPGLPGMKGNAG VPGVDGRPGLEGFPGPQGPKGDRGSPGEKGEKGQDGVGLPGPPGPPGPPGQVITVSSEDK SLVALPGLEGRPGHAGFLGPMGPKGDRGSSGPQGPPGLKGEKGEPGVIISPDGTVVTAKV KGEKGEPGLRGPMGPSGPQGRAGMKGEIGFPGRPGRPGMNGLKGEKGDPADVSSILGLRG PPGPPGPPGPPGPPGSIVYDNSNAFSDSGHPALPAFPGFQQFSGQKGEKGDAGAPGPPGH FPYDLSHFSANLRGDKGDAGPKGEKGEPGSTSLYSPSVPGLPGPPGPQGYPGLPGPKGDS IVGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQAISIPGPPGPPGPPGPPG TSEMSLGLRALPTYQAMLSAAQELPEGSLVFLTDRQELYVRLRGGFRRVLLEEHTLIPSS ALDNEVYDKLPSVHYAGPQPPLQPHGPLHPLRNHVPPPTARPWRGDEVVANQHHLPEQPL LHHQHELLNSYYIHRRPDPAPVAAHVHQDFQPALHLVALNAPLSGGMRGIRGADFQCFQQ ARQVGLAGTFRAFLSSRLQDLYSIVRRADRATVPIVNLRDEVLFANWEALFTGSGAPLRA GARILSFDGRDVLRDAGWPQKSVWHGSDAKGRRLPESYCETWRTDKHAATGQASSLASGK LLEQVASSCQQNFIVLCIENSFMTAAKK NT seq 4587 nt NT seq  +upstreamnt  +downstreamnt atggggaccccagagccaccggcgctggggttcaccgaggctccggtgtaccagtatgcc gtgggagacaccctgggggcaccgggcggcggctgcttctcgggctctttgtcctgctgg tccccgccgcttcccaggagcccggatgtagccagcagctccactgagaacccacaactc ctggatgcagtgaccaccaaggacccacagctcctggggtcagggaccgctgaggacctg cagctcctggggacagggaccaccaaggacccacagctcctggggtcagggaccactgag gacctgcagctcctggggacaggggctgctaaggacttggagatcctgggaacagggacc acagaggacacacagctcctggggttagggaccattgaggacctgcagctcctggggaca gggaccacaaaggaccctcagcttctggagttggggaccactaaggacctgcagctcctg gggacagggaccaccaaggacctacagctcctggggatgaagaacaccgaggacctgcag ctcctggggacggggacccctgtggcgatggggacagaggtgtccttgcagagaccagcg ggtccccggccagagaacctgagcactgaggtcagcctcctggagctgattggagaccct cccccagaggaaatcctcaaaatttatggccctgacaacaaccccggctatgtctttggc cccaacgccaacacagggcaagtggcccggtaccacttgccaagccctttcttccgggac ttttccatcctattccacatccagcccaccaccccacgagctggcgtgctctttgctatc acagactcctcacagagcatcatctatgtgggcatcaagctctcagagctgcgggcaggc aagcagcagatcatcttctactatacagaaccaggctcaccaagctcgtatgtggcagcc accttcactgtgcctaccttgctcaaccagtggacgcgtttggccatcagcgtggaggag gatgaagttgtcctctacctggactgtgaggagcatgaacggttccgctttgagcgctcc ccggatgagatggagctggaagagggctcagggctctttgttgctcaagctggaggagct gatcccgataaataccagggggtgattgctgatttgaagctgctgggggacccacgggca gctgagcgccagtgtgaggaagaggatgacgatgctgaggaggtctcaggtgattttggc agcggggcagaaggtggacaccaacccttggggaaagttgggggtgtcccggggctggtg gatgctgtccctgtcacctctccccctgtggcggtgggcagtggacctaggaccagtggg ggctccccacagcaagctgagaggaccagagcagaagagacactacagggctccatggga ggcactggccccaaaggtgagaaaggagaaaagggtgaacgtggcctgaaaggggactcg gggactggtggcattgtgaggacaggcagtgtcaagggcgaaaagggggagaaaggagaa ctgggcattaagggtagtgctggatttggctaccctggttccaagggacagaaaggtgaa cctggtgatcctggaccccctggaaccctctcacagcacagcgatggctccatggtggag caggtcactggtcctccagggccaccaggaagggatggagctcctggcagggatggcgag cccggtgatcccggcgaggatggcaaacctggtgatatggggccccaggggttccctggg atgccgggggagcctggtttgaagggagagaagggtgacccaggcatggggccaagggga ccccctggacctcctggacctccaggaccaccaggaccctccttcaagcatgacaagctg accttcatcgacatggagggttctggcttcactggcgaactggagaccctgcggggtcca cgagggccacctggtcccccaggaccaccaggtgtgcctggtttgccaggtgagccagga cgatttgggatgaaccacacagacctgccaggaccaccagggctgccaggcagggatggg atccctggaccaccggggccagtgggtcttcagggtcctcctggaagagacggaacacct gggcagccagggcccaaaggagagcggggtgatgtgggcgaccttggcctccctggtgca ccaggacccaagggcagcaagggagaaatgggaccaccaggagccccaggagaaactggc ttagctggtctgcctgggcccattggaccccctgggcagccagggcccccaggacctcca gggccaggctatgaggctggatttagcgacatggagggatctgggctacccttcaccgtc ggctcgccgggaccacgcgggcctgaaggaccacagggagtgccaggactaccaggggtg aagggggaggttggcagtcccgggcagcctggcttgcctggaatgaagggaaatgctggt gtgcctggcgtggatggccgccctggcctggagggcttccctggcccacagggacccaaa ggtgatagaggcagccctggtgagaagggtgaaaaaggccaagatggtgtggggctaccc ggcccccctggtccacctggtccccctggacaggtcatcactgtctccagtgaagataaa tctttggtggctttacctggtctagagggcagaccaggtcatgctggcttcctgggcccg atgggaccaaaaggagaccgagggtcatctggaccccagggtcctccagggttgaaggga gagaagggggagcctggtgtcatcatcagtcccgatgggactgtggtcactgcaaaggtg aaaggagaaaagggggagccagggctgcggggaccaatgggaccctctggtccccaggga cgagcagggatgaagggagagatcggctttccaggcagacccggacgtcctggcatgaac gggctgaagggtgagaagggtgacccagcagatgtcagcagcatcctgggcttgcggggt cccccaggacctccagggcccccagggccccctggaccacctggcagcatagtttatgac aacagcaatgccttcagcgactctggccatcctgcactgccagccttccctggtttccaa cagttttcaggacaaaaaggagagaaaggtgatgctggagccccagggcctccaggccac ttcccctatgacctgagtcacttcagtgccaacctgcggggtgacaagggtgatgcaggt cccaagggtgagaagggtgagccaggcagcacatccctctacagtcccagcgtccctggg ctaccagggcctccagggccccagggctaccctgggctgccgggtcccaagggggatagt attgttgggccaccagggcctcctggacctcagggaccccccggtattggatatgaggga cgacagggacccccaggccctcctggccccccaggtccaccctcctttccaggtccccac agacaagctatcagtatccctggaccccctggaccaccgggaccccctggaccaccaggc accagtgagatgtctttggggctgcgtgccctgccgacctaccaggcgatgctgagcgcc gcgcaggagctgcccgagggcagcctcgtctttctgaccgaccggcaggagctctacgtt cgcctgcgcgggggcttccgacgagtgctgctggaggagcacactctgatccccagttca gctttggacaacgaggtgtatgacaagctgcccagtgtccactacgccggcccccagccc ccgctccagccccacggacccctgcatcctctccgcaatcacgtccccccacccaccgcc cggccctggcggggggatgaggtggtggccaaccagcaccacctgcccgagcaacccttg ctccaccaccagcacgagctcctcaacagctactacatccaccgccggccggatccggct cctgtggctgcccacgtgcaccaggacttccagcctgcgcttcacctggtggctctgaat gccccgctgagcggcggcatgcgtggcatccgaggtgctgatttccagtgcttccagcaa gcccggcaggtcgggctggctggcaccttccgcgccttcctctcctcccgcctgcaggac ctctacagcattgtgcgcagggccgaccgtgccaccgtgcccatcgtcaacctccgggat gaagtgctcttcgctaactgggaagccctgttcacgggcagtggtgccccactgcgagct ggtgcccgcatcctctcctttgatggccgagatgtcttgcgggatgctggatggccacag aagagtgtctggcacggctcagatgccaagggccgtcgcttgcctgagagctactgcgag acgtggcggacagacaagcatgccgcgaccggccaggcttcctcactggcctctggcaag ctgctggaacaggtggccagcagctgccagcaaaacttcatcgtcctctgcattgagaac agcttcatgactgctgccaaaaaatga

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