KEGG   Dryobates pubescens (Downy woodpecker): 104300225
Entry
104300225         CDS       T08526                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03030  DNA replication
dpub03410  Base excision repair
dpub03420  Nucleotide excision repair
dpub03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104300225 (RFC2)
   03410 Base excision repair
    104300225 (RFC2)
   03420 Nucleotide excision repair
    104300225 (RFC2)
   03430 Mismatch repair
    104300225 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpub03032]
    104300225 (RFC2)
   03036 Chromosome and associated proteins [BR:dpub03036]
    104300225 (RFC2)
   03400 DNA repair and recombination proteins [BR:dpub03400]
    104300225 (RFC2)
DNA replication proteins [BR:dpub03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104300225 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104300225 (RFC2)
Chromosome and associated proteins [BR:dpub03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104300225 (RFC2)
DNA repair and recombination proteins [BR:dpub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104300225 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104300225 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 nSTAND_NTPase5 AAA_lid_RFC1 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 Mg_chelatase AAA_11 AAA_assoc_2 AAA_19 DNAX_ATPase_lid MipZ nSTAND3 AAA_24 AAA_18 AAA_5 AAA_28 ABC_tran AAA_25 AAA_23 AAA_30 SLFN-g3_helicase NTPase_1 RNA_helicase RuvB_N MeaB Rad17 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 104300225
NCBI-ProteinID: XP_009898780
LinkDB
Position
Unknown
AA seq 310 aa
MKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMIQHCTNANIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARL
CQKSRAPAAS
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaactatgtgaaatagttggaaatgaagatacagtgagcaggctggaggtctttgcc
aaagagggaaatgtaccaaatattataattgctggtcccccaggaacaggtaaaaccacc
agtatcctctgcttggctcgtgctctgctgggtcctgcactaaaggatgctgttttggag
ctgaatgcctcaaatgacagaggcattgatgtggtgagaaacaaaatcaaaatgtttgcc
cagcagaaggtcacacttccaaagggtcggcataaaataatcatcctcgacgaggctgac
agcatgacagatggagcacagcaagcgctgagaagaacaatggaaatctattccaaaacc
acgcgcttcgcgctagcctgcaatgcctctgacaagatcatagagcccattcagtcacgc
tgtgcagtgctgcgttacaccaagctgacagattcacagatccttgcaaggctgctgaaa
attgtggagaaagaggatgtgccatatacagatgatggactggaagccattatcttcaca
gcccaaggagatatgaggcaggcattgaacaacttgcagtccacatattctggctttggc
tttatcaacagtgaaaatgtctttaaggtgtgtgatgagcctcaccccctgcttgtgaaa
gagatgatacagcactgcacaaatgcaaatatagatgaagcatacaagatccttgcccac
ctgtggcgccttgggtactctccagaggatgtaattggcaacatcttccgtgtgtgcaaa
acctttcaaatgccagaatacctcaagctggagtttatcaaggagattgggtacactcac
atgaagatagcagaaggtgtgaactccctcttacaaatggctggcctgctggccaggctg
tgtcagaagagcagagcccctgcagccagttag

DBGET integrated database retrieval system