Dryobates pubescens (Downy woodpecker): 104300225
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Entry
104300225 CDS
T08526
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03030
DNA replication
dpub03410
Base excision repair
dpub03420
Nucleotide excision repair
dpub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104300225 (RFC2)
03410 Base excision repair
104300225 (RFC2)
03420 Nucleotide excision repair
104300225 (RFC2)
03430 Mismatch repair
104300225 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpub03032
]
104300225 (RFC2)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104300225 (RFC2)
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104300225 (RFC2)
DNA replication proteins [BR:
dpub03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104300225 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
104300225 (RFC2)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104300225 (RFC2)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104300225 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
104300225 (RFC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
AAA_11
AAA_assoc_2
AAA_19
DNAX_ATPase_lid
MipZ
nSTAND3
AAA_24
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_25
AAA_23
AAA_30
SLFN-g3_helicase
NTPase_1
RNA_helicase
RuvB_N
MeaB
Rad17
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104300225
NCBI-ProteinID:
XP_009898780
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMIQHCTNANIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARL
CQKSRAPAAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatgtgaaatagttggaaatgaagatacagtgagcaggctggaggtctttgcc
aaagagggaaatgtaccaaatattataattgctggtcccccaggaacaggtaaaaccacc
agtatcctctgcttggctcgtgctctgctgggtcctgcactaaaggatgctgttttggag
ctgaatgcctcaaatgacagaggcattgatgtggtgagaaacaaaatcaaaatgtttgcc
cagcagaaggtcacacttccaaagggtcggcataaaataatcatcctcgacgaggctgac
agcatgacagatggagcacagcaagcgctgagaagaacaatggaaatctattccaaaacc
acgcgcttcgcgctagcctgcaatgcctctgacaagatcatagagcccattcagtcacgc
tgtgcagtgctgcgttacaccaagctgacagattcacagatccttgcaaggctgctgaaa
attgtggagaaagaggatgtgccatatacagatgatggactggaagccattatcttcaca
gcccaaggagatatgaggcaggcattgaacaacttgcagtccacatattctggctttggc
tttatcaacagtgaaaatgtctttaaggtgtgtgatgagcctcaccccctgcttgtgaaa
gagatgatacagcactgcacaaatgcaaatatagatgaagcatacaagatccttgcccac
ctgtggcgccttgggtactctccagaggatgtaattggcaacatcttccgtgtgtgcaaa
acctttcaaatgccagaatacctcaagctggagtttatcaaggagattgggtacactcac
atgaagatagcagaaggtgtgaactccctcttacaaatggctggcctgctggccaggctg
tgtcagaagagcagagcccctgcagccagttag
DBGET
integrated database retrieval system