Dryobates pubescens (Downy woodpecker): 104300336
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Entry
104300336 CDS
T08526
Symbol
DCAF4
Name
(RefSeq) DDB1- and CUL4-associated factor 4 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104300336 (DCAF4)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104300336 (DCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
WDR55
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40
Beta-prop_SPT8
Beta-prop_EML_2
Beta-prop_EML
PEP5_VPS11_N
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104300336
NCBI-ProteinID:
XP_009898902
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MKRNYWRGKEKHAWNNHKHSYRPRRYRRPNRSNCTERLEQEEPQTPVNAGPSSSEDPSSS
SLTQNSVVPELPGFYYDSEKNRYFRLLPGHNNYNPLTKESIEYKAMECKRLRLLEEEEKQ
KKKTARAGLNSSVLLQKRQLGLLSSRSYCRMVHELKVNCMQRKKIEIHSPDSSAAGTNNF
KTIVADVACERIFTVSDVEHGGCKYGIINLRGLGKESLTVEMYDNLYFTNRKVNSVCWAS
LTHPDSHVLLCLMGIAETPGCASLLPASLFSSTNPGDRPGMLCSFKISTAWSCAWCLNPQ
ADNCFSTGLTRRVLVTNVVTGHRQTFNIVSDVLAQQFATQTPMLYNGCRSGEIFGLDVRQ
RNHKGQSWKAIRLFHDSAVTSLRLLEAERYLMAADMAGQIKLWDLRTAKCVKQYRGHHNE
STVLPVHVNEEEGLLTAVGQDCYTRIWSLQDAQLLRTIPSPHPTSKDAIPSVVFSSRLGG
SRGVPGLLMAVKQDLYHFSYN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaattactggagaggcaaagaaaagcatgcatggaataatcacaagcacagc
taccgtccccgtcggtacagaagaccaaatcgcagtaactgtactgaaaggctggaacag
gaggaaccacagaccccagtgaatgcaggccccagcagcagtgaagatccttcttcatcc
agtttaacacagaactctgtggtaccagaactgccaggattttactatgactcagaaaag
aaccgctattttcgcctgctgcctggacataataactacaacccactcaccaaggagagc
attgagtacaaggcaatggaatgcaaaagactgaggctcttagaagaggaagaaaaacaa
aagaagaaaacagcaagggctggactgaactcatctgtgctgctacagaaaaggcagctg
ggtttgctcagctccagaagttattgcaggatggtccatgagctaaaagtgaactgcatg
cagaggaagaagattgaaattcacagtccagattcctcagctgctggaaccaacaatttt
aaaacaattgtggcagatgttgcttgtgaacggatattcactgtgagtgatgtagagcat
ggaggatgcaaatacgggatcatcaacctccgtggtctggggaaggagtccctcactgtg
gagatgtatgacaacctctacttcacaaaccgcaaagtgaattctgtgtgctgggcgtca
ctgactcatccagattctcatgttttgctgtgtctcatgggaattgcagaaacaccaggc
tgtgccagtctgcttccagcatcattgttcagcagcactaacccaggagatcgacctgga
atgctgtgcagcttcaagatatccactgcctggtcctgtgcctggtgcctgaatccccag
gcagacaactgcttcagcacaggcctgacacgacgagttcttgtgaccaacgtagtgaca
ggccatcgacagacgtttaacatcgtcagtgatgtattggcacaacagtttgccacccag
accccgatgctatacaacggctgccgttcaggtgagatttttggccttgacgtgcgccag
cgtaaccataagggccagagctggaaagcaattcgtctgttccacgactcagcagttaca
tctcttcgccttcttgaggccgaacgctacctgatggcagcagatatggctggacagata
aaactgtgggacctgagaacagccaagtgtgtgaaacagtacagaggtcatcacaatgag
agcactgttctcccggtgcatgtaaatgaggaggaaggacttcttacagcagttggtcag
gattgctacaccagaatttggagtctccaagatgcccagctacttagaaccatcccttct
ccccacccaacctccaaagatgccattcccagtgtggtgttttcttcaagacttggaggt
agccgaggggttcctggcttactcatggctgtcaaacaggatctctaccacttctcctat
aactga
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