Dryobates pubescens (Downy woodpecker): 104300502
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Entry
104300502 CDS
T08526
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dpub04990
]
104300502 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
dpub04990
]
Other domain-containing proteins
Patched domain-containing proteins
104300502 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
104300502
NCBI-ProteinID:
XP_009899097
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MPEGQDVIQKDLNKLETWSQVNLVMLNKGICRVLNLGRNNPHYQYRQRNELHSAVTRIQV
QRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPITHLKDGREVY
NGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELFQKSNRKV
KMYPFTSSSLKEDFQKTSRVSQRYLITSLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTV
TLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTREDQHVKERTAAV
FADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVF
TGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTAKFSEDTADAEETNTYESHLLVWFL
KRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATRTIEYTTAQQK
YFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNISTGLPKK
NFTDMLRNSFLKTPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREELYDLLET
LRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVADSLINVWL
TLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWV
KNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFAILPVILT
FLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccagagggacaggatgtcatccagaaggacctgaacaagttggagacatggagccag
gtgaaccttgtgatgctcaacaagggcatctgcagggtcctgaacctgggtaggaacaac
cctcattatcaatacaggcagaggaatgagttgcactctgctgtgaccaggatccaagtt
caaagacctggtttcaattacacctttgcccatatatgtatcctgaacaatgacaagaca
tgcatagtggacgacatagtgcatgtgctggaggaattaaaggctgctcgctcttctaac
cgaactaattttgcaatcacttacccgatcactcacttaaaggatggcagggaagtgtat
aatgggcatcagctcggtggggttactgtgcacagcaaagaccgggtgaagtctgcagaa
gccattcagctcacctactacttgcaggccatcaactccttgaatgacatggtggcagag
aagtgggaatccattttttgtgacactgttgaacttttccagaaatccaacaggaaagtc
aaaatgtatcctttcacttcttcttcgctgaaggaggatttccagaagacgagcagggtg
tcacagcgctacctgatcacaagcttggtccttgtggtcaccttggccattctctgctgc
tccatgcaggattgtgtccgcagcaaaccctggcttggcctgctgggattgctgactgtg
acccttgccactctgactgcagctgggatcatcaatctcactggtgggaaatataattcc
actttcctgggaatccctttcgtcatgttaggtcatgggttatatgggacttttgaaatg
ttgtcctcctggagaaaaactagagaagaccaacacgttaaagagaggactgcagctgtc
tttgcagactccatgctctcgttttctctcaccactgccatgtacctggtcacttttgga
ataggtgccagtcccttcactaacattgaagcagccaggattttctgctgcaattcctgt
attgcaattttcttcaactacctctatgtactttccttttatggttccagcctggtgttt
actggctacatagaaaacaactaccagcatagtatcttctgcagaaaggtaccaaagcca
gaggtattgcaagagaagcctgcgtggtacaggtttcttctgacagccaaattcagcgag
gacacggcagatgcagaggaaacaaacacttatgagagtcatcttttggtgtggttcctg
aaacgctattattgtgactggataacaaacacttacgtcaagccttttgtagttctcttt
taccttgtttatatttcctttgccttaatgggctacctgcaggtcagtgaagggtcagac
ctgagcaacatcgtagcgacagccacacggaccattgagtataccacagcccagcagaag
tatttcagcaactacagcccggtgattggcttctacatctacgagtccatcgagtactgg
aacaccagcgtccaggaggatgtgctggagtataccaagggcttcgtgaggatatcttgg
tttgaaagctacttaaattaccttaggaaactcaacatatctaccggattgcccaagaag
aacttcaccgatatgttgaggaactccttcctgaagaccccccagtttgcccatttttca
gaggatatcatcttttccaagaaatacaacaacgaagtcgatgtcgtggcctccaggatg
ttcttggtggccaagacaatggaaaccaagagggaagaactttatgacctcctggagacc
ctgaggaagctctccctcacctccaaggtgaaattcatcgttttcaacccatcgtttgtg
tacatggatcgttacgcctcttcggtgggagcccctttacaaaactcctgcattagtgct
ttatttctgctcttcttctctgcattcctggtggcagactccctgatcaatgtctggctc
actctaactgttgcctcggttgaatttggagttataggttttatgaccttgtggaaagtg
gaactagattgtatttctgtgttgtgcttaatttacggaattaattatacaattgacaac
tgtgctccactgttatcaacctttgtcctgggcaaagagttcacaagaactaaatgggtg
aaaaacgccctggaagtgcatggggtagctattttgcagagctacctctgctatattgtt
ggtctgattcctcttgcagctgtgccttcaaatttgacccgtacactgttcaggtgcttg
tttttaatagcattagtcaccttctttcactgctttgccattttacctgtgatactgact
ttcctgccaccatccaagaagaagaggaaagagaagaagaaccctgaaaaccgtgaggaa
attgagtgtgtagaaatggtggatatggatagcacccgagtggttgaccaaattacaaca
gtctag
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