Dryobates pubescens (Downy woodpecker): 104300506
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Entry
104300506 CDS
T08526
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104300506 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpub03032
]
104300506 (POLA1)
Enzymes [BR:
dpub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104300506 (POLA1)
DNA replication proteins [BR:
dpub03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
104300506 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
104300506
NCBI-ProteinID:
XP_009899100
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MCEPGSFAASRSKRERKSRRGQQEALERLKKAKAGEKLKYEVEEFTGVYDEIDEEEYSKM
VRDRQDDDWIVDDDGIGYIEDGREIFDEDLDDDALGPRKKGKSGKTSTTDRKNVKKSVVS
KPNTIKSMFIASAGKKNTDKTVDLSKDDLLGDILQDLNAESVQLSPPPIVTLKRKRSAGV
PLNPFSLKPQSPKAITPPPKKAPAHLRKETPPPASFHPKHPNYVTKSFVASENEDTKPVQ
KATENGGIVKRIEEKAVEDDDDQAVMDFNEEDFDEPMEAEHLETIPETAESLKRDKDTEK
EETKQLEAEKKETSALSYSLPGDSCWDRIDEDEADLVVAEVQLDPNLLPLVNGENDDQVL
RFYWLDAYEDQYSQPGVVFLFGKVWIESANTYVSCCVAVKNIERTVYLLPRETEMDLSTG
KETETPVTIMSVFKEFNDCVSPKYKIMKFKSKKVEKHYAFEIPDVPAKSEYLEVKYSAEC
PRLPQDLKGQTFSHVFGTNTSSLELLLMSRKIKGPCWLEIKTPQPSNQSVSWCKVEAVAM
KPVFVNVVKDLSPPPPLVVMSLSMKTTQNPKTHQNEVVAIAALIHQKFPLDKAPPQPPFQ
THFCAVSKPSDCIFPYDFKEAIKKKNAKIEIAATERTLLGFFLAKIHKIDPDVVVGHNIY
GFDMEVLLQRINVCKVPHWSKIGRLRRSNMPKLGGRGGFAERNAACGRMLCDVEISAKEL
IRCKSYHLSELVRQILKTERREIFPEEIPNMYSVSPHLIFMLENTWTDAMFILQIMCELN
VLPLALQITNISGNVMSRTMMGGRAERNEFLLLHAFHEKDYIVPDKPVFKKPLHKLVDED
EDLEEQSKSKIGKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQR
LSPEAQKRTEVEEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQ
YDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYG
DTDSIMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALTVE
PTGDGKYITKQELKGLDIVRRDWCDLAKETGNYIISQILSDQPRDTIVENIQRKLIEIGE
NVINGQIPVNQFEINKALTKDPQDYPDKKILPHVHVAMWINSQGGRKVKAGDTVSYIICQ
DGSDLSATQRAYAPEQLQKQSNLTVDTQYYLSQQIHPVVARICEPIEGIDSILIATWLGL
DPSQFKVHHHYHKDEENDALVGGPARLTDEEKYRDCERFKFCCLKCGTENIYDNVFDCSG
QFIEPSLQRCSKTECEEPPFNSVVQMSNKLLLDMRRFIKKYYLGWLICEDPTCQNRTRRL
PLHFSQNGPVCQACWKAILRPEYSDKALYTQLCFYRYIFDVDYAMDKVITEEEKEYLKKK
PLRKEVSEAYKRLKSTVDKCLSMSGYSEVNLGQLFAFSMGRPVGESNK
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagcctggaagttttgcagcatcacgttctaaacgtgagaggaaatctagaaga
ggccagcaagaagccctggaacgtctgaaaaaagccaaagctggcgaaaaactaaaatat
gaggttgaggagttcacaggtgtttatgatgaaatcgatgaggaagaatattccaagatg
gtcagagaccgtcaggatgatgactggattgttgatgatgatggaataggttatatagaa
gatggaagggaaatctttgatgaagatctggatgatgatgctcttggtcctcgtaagaaa
ggaaaaagtggcaaaacttctacaactgatagaaagaatgtgaaaaagtctgtggtgtca
aagccaaacacaattaaatctatgtttattgccagtgctgggaagaaaaacacagataaa
actgtggacctgtcaaaggatgatttactaggggatattcttcaagatcttaatgctgaa
agtgttcagttaagtcctccaccaattgtaacactgaaaaggaaaagatctgctggagta
ccgctgaatcctttctctctgaagccccaaagtcctaaggcaatcacccctccaccaaag
aaagctcctgctcacctcagaaaggaaactcctcctccagcttcatttcatcctaaacat
cccaattatgtaacaaaatcttttgtggcctctgagaatgaggataccaagcctgtgcaa
aaagctacagaaaatgggggaatagtgaagagaatagaagagaaagctgttgaagatgat
gatgatcaagcagtgatggattttaatgaggaggattttgatgaacctatggaagcagag
catttggagactatacctgagacagctgaaagcttgaagagagacaaggacactgaaaag
gaagagacaaagcaactggaagcagagaagaaagagacatctgccttaagttattctctc
ccaggtgactcatgttgggacagaatcgatgaggatgaagctgatctagtggtggcagaa
gttcagcttgatcccaatctccttccacttgtgaatggggaaaatgacgatcaagtctta
agattttattggctggatgcttatgaagatcagtacagtcagccaggtgtggtgtttttg
tttggcaaagtttggattgaatctgcaaacacttatgtcagctgttgtgtcgcagtgaaa
aatattgagagaactgtttatctactgccacgtgaaacagaaatggatctatctactggc
aaagaaacggagactccagtaactatcatgagtgttttcaaggaatttaatgactgcgtt
tcaccgaagtacaagatcatgaagttcaaatccaagaaagtggaaaaacattacgctttt
gagatcccggatgtgccagcaaaatcagaatacttagaagttaaatactcggctgaatgc
cctcggcttccccaagatctgaaaggacaaacattttcacatgtatttggaactaacacc
tctagtctggaactcctcttgatgagtaggaagatcaaaggaccatgctggctggaaata
aaaaccccacagccttcaaatcaatctgtcagctggtgtaaagtggaggctgtggccatg
aaacctgtctttgtgaatgtggttaaagatctttctcctcctcctcctcttgtggtcatg
tccctcagtatgaagactactcagaacccaaagactcaccagaacgaggttgtggctatt
gcggctctgattcatcagaaatttcctctggataaggctccacctcagcctccttttcag
acacacttctgtgctgtttccaaaccgagcgattgtattttcccttatgacttcaaagaa
gctattaaaaagaagaatgctaaaatagaaattgctgccacagagagaacactgctggga
tttttccttgcgaagattcacaaaattgacccagatgttgttgtgggtcataatatttat
ggctttgatatggaagtgctgcttcaaagaattaatgtgtgcaaagtccctcactggtcc
aagataggtcgactgaggaggtccaatatgccaaagcttgggggtcgaggagggtttgcg
gagaggaacgctgcctgcggtcgaatgctctgtgatgtagaaatctctgctaaagagctg
atccgttgcaagagttaccatttgtccgaactggtccgtcagattttgaaaacagagagg
agggaaatcttcccagaggaaattccaaatatgtacagtgtttctcctcatttaatcttc
atgctggaaaacacctggacagatgccatgttcattctccagatcatgtgtgaactgaat
gttctgccactggcccttcagataacaaacatctcagggaatgtcatgtcgaggacgatg
atgggtggacgagcggaacgtaatgaattcttgctgcttcatgcatttcatgaaaaagac
tacatagtgccagacaaaccagtgtttaaaaagcctctgcataagctggtggatgaagac
gaagatttggaggaacagagtaaatcaaagatagggaaaaagaaagcagcgtatgctggg
ggcttagtcttggatcccaaagtcggtttttatgacaagtttattttgcttctggacttc
aacagcttgtacccatcaattatccaggagttcaacatctgttttaccacagtgcagaga
ctgtcaccagaagcacagaaaaggacagaggttgaagaagaggaagaaattccagagctt
ccagacccatctctggaaatgggaattttgcctaaagaaatcaggaagctggtggagaga
aggcgccaagtaaagcagttaatgaaacagccagatttaaatccggacctttatttacag
tatgatatcagacagaaagctttgaaactcactgctaacagcatgtatggctgcctggga
ttttcctacagcagattctatgccaaacctttggctgctttggtgacacacaaagggagg
gagattttgatgcataccaaggagatggtgcaaaagatgaacctcgaagtgatttatgga
gacacagattctattatgataaacactaacagcaccaatttggatgaggtcttcaagcta
gggaacaagatcaaaagtgaagtgaacaagctctataaattgctggaaattgatattgat
ggagtctttaagtctttgctactgttaaagaagaagaaatatgctgctctgactgttgaa
ccaactggagatgggaagtacataactaagcaagagctgaaaggattggatattgtccga
agagactggtgtgatcttgcaaaggagactggaaactatataattagtcagattctttct
gatcagccccgagatacaattgtggaaaatattcaaaggaagcttatagaaattggagag
aatgtgatcaatggccagataccagtaaatcagtttgaaataaataaggcattgacaaaa
gatccccaggattatcctgacaagaaaatcttgccacatgtgcatgttgccatgtggata
aactcgcagggaggccgaaaggtgaaggcaggagacacagtgtcgtatatcatttgtcag
gatggatcagatctcagtgccactcagcgagcgtatgccccggagcagttgcaaaagcaa
agcaatcttactgttgatactcagtactacttgtcacagcaaatacatccagtagttgct
agaatatgtgagcccatagagggaattgattctattctcattgcaacatggttaggactg
gatccctcccaattcaaagtccatcaccattaccataaagatgaggagaacgatgccttg
gttggtggcccagctcggctcactgatgaagagaagtatagggattgtgaaagattcaag
ttttgctgcctcaaatgcggaacagaaaatatttatgacaatgtctttgattgttcgggg
caatttattgaacccagcttgcaaaggtgcagtaagactgaatgtgaagagccccctttc
aactcagtggttcaaatgagcaacaaattactgttggatatgaggcgcttcatcaaaaaa
tactatcttggttggttaatctgtgaggatccaacctgccagaatcggacccgtcgactt
cccctgcatttttcccagaatggccctgtgtgccaggcctgctggaaggctattctgaga
ccagagtattctgataaggccctgtacactcagctctgcttctaccgatacatttttgat
gtggactatgcgatggataaagtgattactgaagaggagaaagagtatttgaagaagaag
ccacttaggaaggaagtctctgaggcctacaaaagactgaagagcaccgtagataaatgc
ctgtccatgagtggctactcagaagtgaacctcggccaactctttgccttcagtatggga
agacctgtgggagagtccaataagtga
DBGET
integrated database retrieval system
