Dryobates pubescens (Downy woodpecker): 104300539
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Entry
104300539 CDS
T08526
Symbol
FN1
Name
(RefSeq) fibronectin
KO
K05717
fibronectin 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04510
Focal adhesion
dpub04512
ECM-receptor interaction
dpub04518
Integrin signaling
dpub04810
Regulation of actin cytoskeleton
dpub04820
Cytoskeleton in muscle cells
dpub05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104300539 (FN1)
04518 Integrin signaling
104300539 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104300539 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104300539 (FN1)
04810 Regulation of actin cytoskeleton
104300539 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104300539 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104300539 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpub04147
]
104300539 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
dpub00536
]
104300539 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
dpub04990
]
104300539 (FN1)
Membrane trafficking [BR:
dpub04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
104300539 (FN1)
Exosome [BR:
dpub04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
104300539 (FN1)
Glycosaminoglycan binding proteins [BR:
dpub00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104300539 (FN1)
Domain-containing proteins not elsewhere classified [BR:
dpub04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
104300539 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
Fn3_Dep-1_2nd
fn2
Fn3_VIN3
Fn3_Dep-1_3rd
Interfer-bind
NDNF
FN3_Tor_3rd
fn3_2
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
104300539
NCBI-ProteinID:
XP_009899137
UniProt:
A0A093GBQ7
LinkDB
All DBs
Position
Unknown
AA seq
2483 aa
AA seq
DB search
MPGRAVWRLALLALCLGVAAAGSVGVRRKAGGKSRRQAQTTSIPQGTPAQGKQTCYDNGR
YYQINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKD
SMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEW
TCKPVAERCYDNAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDTK
TSYRIGDTWSKKDNRGNLLQCVCTGNGRGEWKCERHTSLHTTSTGSGSPSFTNVQTALYQ
PQPQQPQPQPYGQCITDNGMVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYGGN
SDGEPCVLPFTYDGRTFYSCTTEGRTDGHLWCSTTSNFEQDRRYSFCTEQNVLIQTRGGN
SNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTND
GVMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKR
HDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKNVHGVRYQCYCYGRGI
GEWRCQPLQTYPGSAGPVQVIITESANQPNSHPIQWNAPERSHITKYILRWRPKNSGRQW
KEATVPGYQNSYTISGLRPGVIYEGQLISVQRYGHKEVTRFDFTTTSTTAVTSNTVSGET
TLLPPVVATSESVTEITSNSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSV
NIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPEHTVESVDDTSIVISWSRPQ
APITGYRIIYTPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPIFIQ
QETTGVPRTDEVPPPKDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPGHHGQRLP
ITRSSFAEVVDLLPGTTYLFKIFAVNQGRESKPLTGEQTTKLDAPTNLRFLNTTEHSVLV
LWTRPRAVITGYRLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKDDLQS
ARETGVFTTYQPAGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVISDS
GSIVISGLTPGVEYTYSLTVLMDGQERDTPIIRRVTTPLSPPTNLRLEPNPDTGILVVSW
DRSTTPGISGYRVTTAPTNGQQGSTLEEVVGADETTCTFENLNPGVEYNVSVYSVKDDQE
SVPISETITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESVPIFEDF
VDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTMR
VTWSAPTSIVLSNFLVRYSPVKKDEDVAELTISPSDNMVILTNLLPGTEYLVRVYSVSEQ
HESAPLSGIQKTALDSPTGLDFSDITANSFTVHWIAPRAAITGYKIRHHPEQGVGRPKED
RVPPSRNSITLTNLLPGTEYVVSVIAISGREESLPLVGQQTTVSDVPRDLEVTPTSPTSL
VISWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTMSTATITGLKPGVDYTITVYAVTGR
GDSPASSKPVTVTYKTEIDTPSQMQVTDVQDNSISVRWLPSTSPVTGYRVTAVPKKGHGP
TKTKNVPADQTQVTIEGLQPTVEYMVSVYAQNQNGESLPLVETAVTNIDRPKGLTFTEVD
VDSIKIAWESPQGQVTRYKVTYSSPEDGIHELLPAPGGEEDTAELHGLKPGSEYTINIVA
IYDDMESLPLTGTQSTAIPPPTNLKFTQVTPTSLTINWNAPNVRLTGYRVRVTPKEKTGP
MKEINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRARVTD
ATETTITITWRTKTETITGFQVDAVPASGQNPIQRTISPDVRTYTITGLQPGNDYKIYLY
TLNENARSSPVVIDASTAIDAPSNLRFLTTTSNSLLATWQPPRAKITGYIIRYEKPGSPA
KEVLPRPRPGTTEATITGLEPGTEYIIYVIAVKNNQKSEPLIGRKRTDDLPTLITRPHPN
QPDILDVPSVDEGTPYLTNNRYDNGNGIQLPGTSGHPQTIGHQGQQVFFEEHGYRRPAPT
TATPLRPGSGRQPPNVDEAIEIPGYQVPIIVEPSYPHSRVPKRNYTTGQEALSQTTISWR
PLLESTEYIISCQPVSQDEDTLQFRVPGTSSSATLTGLTRGATYNIVVEALKDHRRQKVL
EEVVTVGNTVSEGLNQPADDTCFDTYTGSFYSIGEEWERLSETGFKLWCQCLGFGSGHFR
CDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCEPHETTCYDDGKMYQV
GEQWQKEYFGAICSCTCYGGQQGWRCDNCRRPSVEVAPEGSAGHTYTQYTQRYHQATNAN
VNCPIECFMPLDVQADTQHPRGK
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgcgccgtgtggcggctggcgctgctcgctctctgcctgggggttgcagca
gcgggaagcgtcggagtgcgccgcaaagccggcggcaagagccggcggcaggcgcagacc
acctcgatacctcagggcacccccgcgcagggcaagcaaacgtgctatgacaatggaaga
tactatcagatcaaccagcagtgggagcgcatttacctgggaaacacgctggtctgtacc
tgctacgggggaagccgagggtttaactgcgaaagcaagcccgaacctgaagagacttgc
tttgacaagtacactggatccacttaccgagtaggggagacgtatgagcgccccaaggac
tccatgatctgggactgtacttgcattggagctggacgtgggagaatcagctgcaccatt
gccaatcgctgccatgagggtggccagtcctacaagattggtgatacctggcgccggcct
cacgagactggtggctacatgctggagtgcgtgtgcctgggcaatggcaagggcgaatgg
acctgcaagcctgtggctgagcgatgctatgacaatgcagctgggacatcttacgtggtt
ggtgagacctgggagaagccctaccagggatggatgatggtggactgcacctgtctgggg
gagggcagtggccgcatcacttgcacctccagaaataggtgcaatgaccatgacaccaag
acttcatacagaattggggacacctggagcaagaaggataaccgtgggaacttgcttcag
tgtgtctgtaccggtaatggcagaggtgaatggaaatgtgaaagacacacatccctgcat
acaactagcactggatctggctctcctagcttcacgaatgtgcagactgctttgtaccag
ccccagcctcaacagccccagcctcagccgtatggccagtgcataactgataatggaatg
gtgtactctgtgggtatgcagtggctaaagacacagggcagccagcaaatgctttgtacc
tgcctgggaaatggagtgagctgccaggaaatagctgtgacccaaacatatggtggcaat
tctgatggagaaccttgtgttctgcctttcacctatgatggaaggactttctactcctgt
accactgaaggccgcacagatggacacctctggtgcagcaccacttccaactttgaacaa
gacaggagatattccttctgtactgagcagaatgttttgatccagacacgtggcggcaat
tccaatggtgctctgtgccacttccccttcctgtacaacaatcgcaactacactgactgt
acttctgagggacggagagacaacatgaagtggtgtggaaccactgagaactatgatgct
gaccagaaatttgggttctgccccatggcagctcatgaagaaatctgcacaaccaatgat
ggggtcatgtaccgtgttggagaccagtgggataaacagcatgatatgggccatatgatg
agatgtacttgtgtgggaaatggccgtggagaatggacttgcattgcatattcccaactc
agagaccagtgcatcgtggatggtatcacctatgatgtgaaccagaccttccacaagcgt
catgatgaggggcacatgctgaactgcacatgctttggtcagggccgggggagatggaaa
tgcgatcctgttgatcagtgccaggattcagaaacccgtaccttttatcaaattggagat
tcatgggagaagaatgtccatggagtcagataccagtgctactgctatggtcgcggcatt
ggagaatggcgttgccagcctctgcagacctatcctgggtcagctgggcctgttcaggtt
atcatcacagagagtgcaaatcagccaaactcccaccctatccagtggaatgctcctgaa
agatctcacatcaccaagtacatcttgcgctggagacccaaaaactctggaaggcagtgg
aaagaagcaactgtccctggctaccagaactcctacaccatctcaggcctgaggcctggt
gtgatatatgaagggcagctcatcagtgttcagcggtatggccacaaagaagtcacccgc
tttgattttaccacaaccagcaccacagcagtgacaagcaacactgtttcaggagagaca
actcttcttcctcctgtggttgctacttcagagtcagtcactgaaatcacgtccaacagc
tttgttgtctcctgggtttctgcttctgacacagtttctggattccgcgttgagtatgag
ctgagtgaggagggtgatgagccacagtatcttgatcttccaagcacagccacttctgtc
aacatccctgacttgcttcctggtcgcaagtatattgttaatgtctatcagatctctgaa
gaaggagagcagaatctgatcctgtctacttcacagactacagctcctgatgcacctcct
gagcacactgtggaaagtgtagatgacacatcaattgtcattagctggagcagaccacag
gctccaatcacaggctacagaattatctacacaccctctgtggaaggcagcagcacagag
ctcaaccttcctgacactgcaacctccgtaacactcagtgacttgatgccaggtgttcag
tacaacatcagcatctatgcagtggaagaaaatcaggagagtactcctatcttcatccaa
caggaaaccacaggtgtcccacgcacagatgaagttcctccacccaaagatctgcagttt
gtggaggtttctgatatcaaaatcaccatcatgtggaccccaccacagagccaagtgtct
ggctatcgagtggaggtgatccctgtcaatcgccctggccaccacggccagagactgcct
atcaccaggagctcttttgctgaagttgttgacctgctgcctggaacaacctatctcttt
aagatctttgccgtgaaccagggaagggagagcaagccattgactggagagcaaaccacc
aagcttgatgctcccaccaacctgagatttctcaacaccacggagcattcagtgttagtg
ttgtggacacggccccgtgctgtgatcacaggataccgcctgactgcaggtcctacaaga
ggaggtcaaccaaggacctacaatgtgggaccttctgccaccaagtaccttctcaggaac
ttgcagcctggcactgagtacacagtgtaccttgtggcggttaaagatgatttgcaaagt
gccagagagactggagtcttcacaacgtatcaacctgctggctctgttcctccttttaac
acagaagtgactgagacttctattgtcatcacctggacacccgccccaaggattggtttc
aagctgggtgtgcgcccaagccaaggtggagaggctccccgggaagtcatctctgattct
ggcagcatcgtgatttctggtctgacccctggagtggagtacacctacagcctcacagtc
ttgatggatggccaggagagagatactcctatcatcaggagagtgactacaccactgtct
ccaccaaccaacctgcgcctggagcccaatcctgatactgggatcctggtagtctcttgg
gatagaagcacaactccaggcatcagtgggtaccgagtgaccactgctcctaccaatggg
cagcagggttctaccttggaggaagttgtaggtgcagatgaaaccacctgcacctttgaa
aacctgaaccctggtgtggagtacaatgtcagtgtttactcagtcaaggatgaccaggag
agtgttcccatctctgaaaccatcacacaagaggtgccccaactcactgacctaagcttt
gttgacataactgactcaagcatcggcctgaggtggaccccgctaaatgcctccaccatt
attgggtaccgcatcactgtagttgcagcgggagaaagtgtccctatttttgaagatttt
gtggactcctcagtaggatactacacagtcacaggcttggagccgggcattgattacgac
atcagtgtaatcacactcattaatggcggagagagcgcccctaccactctgacacagcaa
acggctgttcctcctcccactgatctccgcttcactaatgtggggcctgatactatgaga
gtgacttggagtgcaccaacttccattgtgctgagcaatttcttggtgcgctactcacct
gtgaagaaggatgaggatgttgcagagctgacaatttcaccctcagacaacatggtgata
ttaacaaatctgctccccggtactgaatatctagtgagagtctacagcgtttctgagcaa
catgagagtgcacctttgtctggaatccagaaaacagctcttgattcccccactggcctt
gacttctcggatataactgccaattctttcactgtccactggattgctcctcgtgctgcc
attacggggtacaagatccggcatcacccagagcagggtgttggcaggcccaaggaggac
cgtgtgcccccctcacgcaactccatcacccttaccaacctgcttcccggaactgaatat
gtggtcagtgtcattgccatcagcggcagagaggagagcttacccttggttggccaacaa
acaacagtgtctgatgttccaagggacctagaagtcacccccaccagcccaaccagcctt
gtaatttcctgggatgctcctgcagtaacagtcagatactaccggatcacttatggtgaa
acaggtggaagcagccctgtgcaggagtttacagtgcccggcaccatgtccactgctacc
atcactggcctcaaacctggcgtagactataccatcactgtgtatgctgtaactggccgt
ggagacagccctgccagtagcaagccagtcactgtcacctacaaaacagaaatagacaca
ccatcccagatgcaagttaccgatgtccaggacaacagtatcagcgtcagatggcttcct
tcaacgtccccagtcacaggataccgtgtgacagctgtccccaagaaaggacatgggccc
acaaaaactaaaaatgttcctgcagatcaaacgcaagtcacgattgaaggtctgcagccc
acagttgagtatatggtcagtgtctacgctcagaatcagaatggagaaagcctccccttg
gttgagacagctgtcaccaacattgaccgccctaaaggactaacattcactgaggtggat
gttgattccatcaaaattgcttgggaaagcccgcaggggcaagtcaccaggtacaaggtg
acctactcaagccctgaggatggaatccatgagctattgccggccccaggtggcgaagaa
gacactgctgagctgcatggcctcaagccaggttctgagtacactatcaatatcgttgcc
atatacgatgacatggagagtctgcccctcactgggacccagagcacagcaattccacct
ccaacaaacctgaagtttactcaggtgactcccaccagtcttaccatcaactggaatgca
ccaaatgttcgcctcactggctacagagtcagagtgacccccaaagaaaagactggtcct
atgaaagaaatcaacctttctccggacagtacatctgccgtggtgtctggattaatggta
gcaaccaagtatgaagtgagtgtatatgccctgaaggactctctgaccagccgaccagcc
cagggagtggtcaccactcttgaaaatgttagcccccctcgcagggcccgtgtgacagat
gccaccgagacaaccattactattacctggagaaccaagactgagaccattactggcttc
caagtcgatgcagtcccagcaagtggccagaaccccattcaaaggaccatcagccctgat
gtcaggacttacaccatcactggcttgcagcctggcaatgactacaagatctacctttat
actctgaatgagaacgcacgcagttcccccgtagtgatcgatgcctccaccgctattgat
gctccttctaacctgcgcttccttacaaccacaagcaactccctcctggctacctggcag
cctccccgtgccaagatcactggctacattatcagatatgagaaacctggctcacctgcc
aaggaggttctacctcgccctcggcctggcaccactgaggctactattactggtttggaa
ccaggaactgaatacatcatctacgtcattgctgtgaagaacaatcaaaagagtgaacca
ctgatcggcagaaaaaggacagatgatcttcccacgctgattacccgaccacaccccaac
caacccgacattctcgacgtaccttccgttgacgaggggaccccttacctcacaaacaat
agatatgataatggaaatggtatccaacttccaggcacctctgggcaccctcagacaata
ggacaccagggtcagcaagtcttctttgaggagcatggctacagacggcctgcacccact
acagcaactccccttaggcctgggtcaggacggcagccaccaaacgtcgatgaagcgatt
gaaatccctgggtaccaagtgcctatcatagtggaaccttcataccctcactcccgtgtg
cccaagcgcaattacaccacaggtcaggaagctctttctcagacaaccatctcctggagg
ccgttactggagagcactgaatacatcatctcatgtcagcctgtcagccaggatgaagat
actctgcagttcagggttcctggaacttcttccagtgctacactcactggtcttacaaga
ggagccacctacaacattgtagtggaagccctaaaagatcaccggagacaaaaggtgctg
gaggaggtggtcacagttggcaacactgtgtctgaaggactaaaccagccagctgacgac
acctgctttgatacttacactggctccttctattccattggcgaggaatgggagcggcta
tctgaaactggctttaaactctggtgccagtgtttaggctttggcagtggtcatttcaga
tgcgattcttctaagtggtgccatgataatggtgtaaactacaagatcggggagaagtgg
gaccgtcaaggggagaatggccagatgatgagctgcacctgccttgggaatggaaaagga
gaattcaagtgtgaacctcatgagaccacatgctatgatgatgggaaaatgtaccaagtt
ggagagcagtggcagaaagagtactttggggccatctgctcctgcacttgttacggagga
cagcagggctggcgctgtgacaactgccgcaggcctagcgtagaggtggcccctgaaggt
tctgctggccatacctacacacagtatacacagagataccaccaggccacaaatgccaac
gtcaactgccccattgagtgtttcatgcccctagatgtacaggcagacacacaacatcca
cggggaaagtaa
DBGET
integrated database retrieval system
