Dryobates pubescens (Downy woodpecker): 104300540
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Entry
104300540 CDS
T08526
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104300540 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpub02000
]
104300540 (ABCA12)
Transporters [BR:
dpub02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104300540 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
DUF4162
Motif
Other DBs
NCBI-GeneID:
104300540
NCBI-ProteinID:
XP_009899138
LinkDB
All DBs
Position
Unknown
AA seq
2513 aa
AA seq
DB search
MFQLAITNLKLSPEFAALYKNGSEHFSRELSCTVQALQFSLSFLSKLNLVSELENSWVEE
QMRALTAVTEGLLQSNASCPVLVPDADDLLLSQLLNLVIPLMVNEEVLNSLNFSDGLAVW
NNMSTLFSVAQDEVNMNNLLQSLQSAFNLTTWRYYSGIWDVIDSFLNTKRDLTEAAAFAK
LLEAVANNSANGLSAADIVEGSLYILKRLNFSELLNEFKISSGLSLLSSKTSFDSVIDVV
THHFIAMTETLYNKTLPWAQSDQSLSPTSLITRFLFLEFENTILQVTVNNSYHPYLMCLI
NATRDEDSKLTENITLLLKQAHLKKNSFMQNNTSEKHSSIPELLKLKISHLRDLTALLCD
YESFKSIQHICHLPDVSFGELCEQSQSHEQLLHAIEVSNQVVTNVLNHRRISQELQTVLI
GNATNIQTQMKWFHENVPEIAFFQEIPQYVTALNSMLNMTENLTDSNKKEKLGGVFKNVD
QLKQDLKKATRMSIASIDALLEASLPENSSQLISQILQLDSCSMRPADPQLQIAVEEFCN
LSLSERTRETYILGVTLLRHIDIYNFLYKMFFPKELQKPVDKMLGLLTKMKYFRHQVESG
VDPLLQAIHSLKKLRQSRNVPLTKALFKPNNIRITRGTFKSMSKVLCNQEITPLFFESLL
PDFEDPVNNSSSMEDVYVQKMVAKYGIPQDSTPFCLSFYLDLVKTPTGALIWSFLKPMVL
GKILYTPDTIETRAIMGKSNATLEQMADLALKSQEWLDKSPVIMNSLTKLNQTVPMIKNT
LQNPFVQVFIKLMVDLDAAELLSQINKLDDIRLELQNNSDIVDQLNTLATLAVNVSSCVS
FNRIQAVKNLEELEMVAKELFLKNELFASIIFKLPSSHSSPGHSVYGDLALPPVLNYTIR
MSSRITQTTNRIRERIWTVGPHNSTSQSQIYSRAFIYIQDSIERAIIELQTGKKPEEIAV
QVQAMPYPCYNKDMFLTSVTYSLPFALMAAWVLFIADFVKTLVQEKDLRLYEYMKMMGVN
ASSHFIAWFIECAVFLLITVTFLIIVLKVGDILPKTNTALLFLYLMDYSLSIIAMSYFIS
VFFNNTNIAALVGSLVYILTFFPFIVLLVIENHLSFSVKSLLSLLSPTAFSYASQYIARY
EAQGVGLQWDNMYKSPMIGDNTSFGWMCWLILIDSFIYFILGWYIRNVFPGRYGMAAPWY
FPLLPSYWIEYNSYLPFWNEKRRGLLLSKLILRKEATLNNKICAPSPHLEPEPTDLTLGV
ALHGITKIYGSKAAVDNLSLNFYEGNITSLLGHNGAGKTTTISILTGLFPTSSGTIFVYG
KDIRTDQEVIRKNMGVCMQHNVLFNYLTTKEHLLLYGYIKVPHWSKQELYQEVKRTLKET
GLYSHRHKLAGSLSGGMKRKLSIAIALLGGSRVVILDEPTTGVDPCSRRSIWEIISKNKK
GRTIILSTHHLDEAEVLSDRIAFLEHGGLKCCGSPFYLKETFGDGYHLTLTKKKNMIEEC
DTTAVTSLIQSHLPEAYLKEDIGGELVYVLPPFKSTVSGAYQALLRALDTSLSDLHLGCY
GISNTTVEEVFLNLTKELVKNQQEDAELPQQLPGASGQIGSDEMSLSTDTFTERDDQLLI
RSKSLQGLPLLLKQTSALFIKRFHHTRRDVRGFIAQVILPVLFVTAAMGLGMLRTKETEY
PELLLSPSLYGTSDQADFFGNFNETTDALVASMLAFPGTDNTCMNESNSQCLKEDMLGQW
IMSGNQRSTYSACNCTHGIQTCPQTNYTPPHRRTFSTRTVYNLTGHNVETYILATTKDFL
QKRYGGWSFGLPLTKDLQFDIRPVPPNRTLTKVWYNPEGYHSLPAYLNSLNNFILRANLP
KNETSRYGIFLSAHPYPGGQSQEQVMLNSLLDIIVSMSVLVGYSITTASFVLYVVKEHQT
KAKQLQHISGIGMTSYWVTNFVYDLVLFMVPIGLSIGVISSFQIPAFCNDSNLLAVFLLL
LLFGYATFSWMYLLAGVFKETGMAFIVYVCVNLFFGINTIITHSVVFLLSQEKATDQGLR
DLAENLRHAFLLFPQFCFGYGLIELSQDQALLGFLKAYGVDYPDKTFELDKTTSKLFAMF
IQGTVFFAIRLTVHDRMIQRVWNNLLEYLFNRVHGKTSLLPPAAEEDGDVQAERVRVESG
KADFDVVQLQNLTKIYHLPHKRIVAVKNISLGIPSGECFGLLGVNGAGKTTIFKMLTGDI
GASNGRLRIQDHSGSLNDINETHWSLFGYCPQEDALDDLLTVEEHMYYYARLHGIPERDI
KGVVLQLLHRLNLMAYKDRVTSMCSYGTNRKLSTALALIGNPSILLLDEPSSGMDPNAKR
HLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGSFQCIGSLQHIKSRFGRGFSV
KMHLNSNTVCTEALTEFMKSHFPNTCLKDRHFNMVEYHIPVSAGGVANIFDLLEASKAAF
NIRHFSVSQTTLEEVFINFAKDQADPDGADAGPDVTTDNSDTSSQVSTISSIY
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcttgcaataacaaacctgaaactgtctccagagtttgctgctctctacaag
aacggcagtgaacacttttccagggagctgtcttgcactgtccaggctctgcagttttct
ctgagtttcctttccaaattaaaccttgtgtctgagctggaaaactcttgggtggaggag
cagatgagagctctgactgctgtcacagaggggctgctgcagagtaacgcctcctgcccg
gtcctagtcccagatgcggatgatctgcttctgtctcagcttttgaacctggttattcct
ctcatggtgaatgaagaagtactgaactccctaaacttctctgatggcttagcagtctgg
aataacatgtccacactctttagtgtagcacaggatgaggtcaacatgaacaacctactg
cagagtctccaaagtgccttcaacctcaccacatggaggtattactcaggcatctgggat
gtgattgacagtttcctaaacaccaaaagggatctaactgaagcagctgcctttgcaaag
ttgttggaagcagtggcaaacaactctgccaacggtttgtcagctgcagacatagtagaa
ggcagtctctacattctcaagagactgaacttctctgaactgctaaatgaattcaagata
agttctggcttgtctttactctccagcaagactagttttgatagcgtgattgatgttgtc
acccatcacttcattgccatgacagaaaccctgtacaacaagaccctaccttgggctcag
agtgaccaaagtctgtcaccaaccagtttaatcacacgatttttgtttttagagtttgaa
aacaccatcttgcaggtgacagtgaataacagctatcacccttacctgatgtgtttaata
aatgccaccagagatgaagacagcaaattgacagaaaacatcacactgcttttgaagcaa
gctcatctgaaaaagaactcttttatgcaaaataatacctctgagaaacattcatccata
ccagagctcctgaagctaaaaatctctcatcttcgggatctgacagcgcttctttgtgac
tatgagagctttaagtcaatacagcatatttgccatctccctgatgttagctttggagaa
ctgtgtgaacaaagtcagtctcatgagcagctcctccatgctattgaagtgagtaatcaa
gttgtgaccaatgtactgaatcatagaagaatctcccaagagcttcaaactgtactgatt
gggaatgccacaaacatccagacacaaatgaaatggtttcatgaaaatgtaccagaaatt
gctttctttcaagagattcctcaatatgtcactgctttgaattccatgttgaacatgact
gagaatttaacagattctaacaagaaagaaaagttaggaggtgtctttaaaaatgtggac
cagctcaaacaggatctgaaaaaagcaacaagaatgtccatagccagtattgatgctctt
ttggaagcatctctcccagaaaacagcagccagctcatttctcagattctccagctggac
tcttgtagcatgcgtcctgctgacccacagctgcaaatagcagtggaggagttctgcaat
ctctctctttcagagaggactcgtgagacctacatcctgggggtcactctgctacgacac
atagacatttacaatttcttatacaagatgtttttccctaaggaacttcagaaacccgtg
gataagatgttaggtcttctgacaaaaatgaagtatttcagacatcaggttgaatctggt
gtggatccactgctacaagccattcattcactgaaaaagctccggcagtctagaaatgta
ccactgactaaggcattatttaaaccaaacaacattaggataacacgtggcacatttaag
tccatgtcaaaagtcctctgcaaccaggagatcacacccctgttttttgagtccttgctt
ccagattttgaagaccctgtaaacaacagttcttctatggaggatgtctatgtccaaaag
atggtggcaaaatatggaattcctcaagactccacaccattttgcttatccttttacctg
gacctggtcaagaccccaactggagctttaatttggtcttttttaaaaccaatggtgctt
gggaagatcctttatacaccagatacaatagaaactcgagcaatcatgggaaagtctaat
gcaaccctggagcagatggctgatctagccctgaaatcacaggagtggctggacaagtct
cctgtcatcatgaattcgctgactaagttaaaccagacagttccgatgatcaagaacacc
ctgcagaatccctttgtgcaggtgtttatcaagctgatggtagatttggatgcagctgaa
ctgctgagtcagataaacaaactggatgatattcgactggagctccagaacaactctgac
attgttgatcagctgaatacattagctactcttgctgtgaatgtgtcctcctgtgtctcg
tttaatcgtattcaggcagtcaaaaacttagaggagctggaaatggtggctaaagagctc
tttctgaagaacgagcttttcgcaagtatcattttcaagctgccttcaagtcatagcagc
cctggacactcagtttatggggacctcgccctccctcctgtgctcaactacaccatccga
atgagcagcaggatcacacaaaccaccaacaggataagggagcgcatctggactgtgggt
ccacacaactccacctcgcagagccagatttacagccgggcatttatttacatccaggac
agcattgaaagagccattattgagttacagactggcaagaaaccagaggaaatagctgtt
caagtccaggccatgccttacccctgctacaataaggatatgttcttaaccagcgtgacc
tactctcttccatttgctctgatggctgcctgggtgctgtttatagctgattttgttaaa
acacttgttcaagagaaagatctgaggctttatgagtacatgaaaatgatgggtgttaat
gccagcagccatttcatcgcctggttcatagagtgtgccgtcttccttctaattactgtc
accttcctcatcattgttctaaaagtgggtgacatccttcccaaaacaaacacagcactc
ctgttcctgtaccttatggactacagcctgtccatcatagccatgagctacttcatcagt
gttttcttcaataacacaaacatagcagccttggtgggcagtcttgtgtacatcctcacc
ttctttcccttcattgtgttgcttgtcatcgagaatcatttgagcttctctgttaagagc
ctactgagtctgctatctccaactgcgttcagctatgcaagtcagtacattgctcgatat
gaggcacaaggtgtaggtctgcagtgggacaacatgtataagtctccaatgattggagac
aacacttcctttggctggatgtgctggctcattctgatagactctttcatctacttcatc
ctgggatggtacataaggaatgtttttccaggtagatatggcatggctgctccctggtat
ttcccattgcttccatcttactggattgaatacaacagttatcttcccttctggaatgag
aaacgaagaggccttctcctctccaagctgatattaaggaaagaagccactctcaacaat
aagatatgtgccccatcacctcacctggaaccagagcccactgatctcactttgggagtc
gccctccatggtataacaaagatctatggatccaaagctgcagtggacaacctcagcctc
aacttctatgaagggaatatcacttccctgctgggacacaatggagctgggaaaactacg
accatatctattttgactgggctgttccctacatcatcaggtactatctttgtgtatggc
aaagacatcaggactgaccaggaagttatcaggaagaacatgggggtgtgtatgcagcac
aatgttctttttaactacctcaccacaaaggaacacctcctgctctacggctacatcaaa
gtccctcactggagtaaacaggagctctaccaagaagtgaagaggactttgaaggagact
ggactgtacagccatcgtcacaagctagctggctccctctcaggggggatgaagaggaag
ttatccatagctatcgctctcctgggtggatcaagggtggtgatactagatgaaccaacc
acaggggtggatccatgttctcgaagaagtatttgggaaattatctccaagaataaaaaa
ggcagaaccatcattctctccacacatcacttggatgaagcagaagttctgagtgaccga
attgccttcctagagcatggagggctcaaatgctgtggctctccattctacctcaaagaa
acttttggtgatggataccacttgacactcacaaaaaagaagaacatgatagaggagtgt
gataccacagcagttacctcattgatccagtctcacctcccagaggcttatcttaaggag
gatattggtggagagcttgtgtatgtgcttcctcctttcaaatccacagtctcaggagcc
taccaggctcttctcagagcccttgataccagcctgagtgatctccaccttggttgctac
gggatttcaaacacaactgtggaagaggtgtttctcaatctgacaaaagagcttgtgaag
aaccagcaagaagatgctgaactgccccaacagctgcctggagccagtggtcaaattggc
agtgatgaaatgtctctgagcacagataccttcacagaaagagatgatcagctcctgatc
agatcaaaaagtctgcagggtttgccattgctgctgaagcagacatcagctttgttcatt
aagagatttcaccatacccggcgggatgtcagaggcttcattgctcaggtcatcctccca
gtcctctttgtgacagctgcaatggggcttgggatgctgagaactaaggagactgaatat
cctgaactgcttctttctccctctctgtacggcacatctgaccaggcagacttctttggt
aattttaatgaaaccacagatgctttagttgcttcaatgcttgctttccctggaacagat
aacacatgcatgaatgaaagcaattcgcagtgtttaaaggaggacatgcttggccagtgg
attatgagtggaaaccagagatctacgtactctgcctgcaactgcacacatggaatccag
acgtgtccacagacaaactacactccccctcacagaaggaccttctccacacggacggtc
tacaaccttacagggcacaatgtggagacctacatcctagcaactaccaaagacttcctg
cagaaacggtatggtggctggagctttggactgcctttgacaaaagatctccagtttgat
atcaggccagtgccccccaacagaacactgactaaggtgtggtataatcctgaaggttat
cacagccttccagcctatctcaacagcttgaacaacttcattcttcgagctaacttgcca
aaaaatgagacttctagatatggtattttcttatcagctcacccatatcctggaggacag
agtcaagaacaagtaatgctcaacagcttacttgacatcatagtttcaatgtctgttttg
gttggctactctatcacaacggcaagctttgtgctctacgtggtaaaagaacatcaaacc
aaagccaagcaactgcagcatatttcaggcattgggatgacaagctattgggtgactaac
ttcgtttatgatctggtactttttatggtccccatcggtctctcaataggagtgatttca
tccttccagattccagctttctgcaatgacagtaacttactggcagtatttcttttgctg
ttactctttggatacgcgacgttttcctggatgtacctgctggctggagttttcaaagaa
acaggaatggccttcatcgtctatgtctgtgtcaacttgttctttggcatcaataccatc
atcactcactcagttgtgtttctgctctcccaggaaaaggccacggaccagggcttgcgc
gatcttgctgaaaacttaaggcacgcgttccttctgttcccacaattttgcttcggctat
ggcttgattgaactatcacaggatcaggcactgctgggcttcctgaaagcctatggagtg
gactaccctgacaaaacctttgagctggacaagaccacatccaagctatttgccatgttc
atccagggcaccgtgttttttgccattcgtcttacagttcacgacaggatgattcagaga
gtctggaacaacttactagagtacctgtttaacagagtacatggcaaaacatcacttctt
ccccctgcggctgaagaggatggggacgtccaggcagaaagggttagagtcgagtctggc
aaagctgactttgatgtggtgcagctccagaatctgacaaagatctaccaccttcctcac
aaacgcatcgtggctgtgaaaaacatcagcctggggattccttctggagaatgctttggc
ttgcttggtgtgaacggagctggaaaaacgaccatctttaagatgctgacaggtgatatt
ggagcatccaacggaaggctgcggatccaggatcattctgggtccttgaatgacattaat
gagacacactggtcactctttggctactgtcctcaagaagatgccttggatgacttgctg
acagtggaagagcacatgtattactatgctaggctccatggtattccagagagagatatc
aaaggagttgtactccagcttctccaccggttgaatctgatggcctacaaggacagagtc
acttctatgtgcagttatggcaccaacagaaaattgtcaactgctctggctctcattggg
aatccatcaattctgctgctggatgaaccaagctctggaatggatccaaatgctaaacgc
cacctctggaaaatcatcagtgaggaggtgcagaacaagtgctcagtgatactcacatcc
cacagcatggaagaatgtgaagccctctgtaccaggctggctattatggtgaatgggagt
tttcagtgcattggctctttgcagcacatcaagagcaggtttggaagaggattctctgtg
aagatgcacttaaatagcaacacagtttgcactgaggcactgacagagttcatgaaatca
cactttccaaatacatgcctgaaggatcggcatttcaacatggtggagtatcacattcca
gtctctgcaggaggggtagcaaatatatttgatctcctggaagccagcaaagcagccttc
aatatcaggcacttctcagtgagtcaaacaacattagaggaggttttcatcaactttgct
aaagatcaggcagatcctgacggtgcggatgcgggtcctgatgtgacaacggacaactct
gatacaagcagccaagttagcaccataagctccatctattga
DBGET
integrated database retrieval system
