Dryobates pubescens (Downy woodpecker): 104300553
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Entry
104300553 CDS
T08526
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104300553 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104300553 (BARD1)
04121 Ubiquitin system [BR:
dpub04121
]
104300553 (BARD1)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104300553 (BARD1)
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104300553 (BARD1)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104300553 (BARD1)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104300553 (BARD1)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104300553 (BARD1)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104300553 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
zf-RING_6
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
zf-C3HC4_2
NIBRIN_BRCT_II
zf-C3HC4
PTCB-BRCT
zf-C3HC4_4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
104300553
NCBI-ProteinID:
XP_009899151
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MLREPVSLGQCDHVFCLSCVGDCIGTECPVCYVPAWVQDAQVNRQLETMIQLCGKLQHLL
GADTSDSTAGMSTTESSFLKKSKKEQIKMWFSPKSRKIRCVLNTRQPDAKSDDLCQDTSS
VYDFFPSPPHNEPSKATKKPMQPQKKKKKKKKILADINKVWSLEKPEQKGGLEKTPKERH
VTICSQPVVLGPPEPNKSPTSPISKTFDQVRIPHSPSVLKSPGGNTIARRNYKGETLLHV
ASIKGDLVTVEQLLKNGADPNVKDNAGWTPLHEACNHGHTEVVELLLQHKALVNTAGYQN
ESPLHDAAKNGHVSIAELLLLHGASCDAVNKFGLRPVDYAQSEKMKSVLMLAEKNESFSL
KQPSDEVSSLSPSQPRDGPVGILGSSLSLKQQKLLNKLATVLKAQKHTEFNSRVTHLIIP
DVPMPSTVKCMMAVLTGCWVLKFEWVQACLQTTVREQEEKYEIQGGPQRGRLNREQLLPK
LFDGCYFYFLGSFSHHQKSDLVELVKAAGGQILVRQPKPDSDVTQTINTVAYHAESTSDQ
RFCTQYVIYDVASKFKPEKIRQGKVWMAPSSWLIDCVMSFQLLPVK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggagcccgtgtccctggggcagtgcgaccacgtcttctgcctatcttgtgtg
ggtgactgtattggcacagaatgcccagtgtgttacgtaccagcctgggtgcaagatgca
caggtaaaccggcagctggaaaccatgattcagctttgcggcaaactgcagcatctgctg
ggggcagacacctcggattcaacggcaggtatgtccacaactgagtcaagctttttaaaa
aagagtaagaaggaacagataaaaatgtggttcagcccaaaaagcaggaaaatccgatgt
gtcctgaacacgagacagcctgacgccaaaagtgatgacctctgccaggacacatcttct
gtttatgatttctttccttctcctcctcacaatgagccctccaaagcaacaaaaaagcca
atgcagccacagaagaagaagaagaagaagaagaaaattctagcagacataaacaaagtg
tggagcttagagaaacctgagcagaaaggaggacttgagaagactcccaaggagaggcat
gttaccatctgcagtcaaccagtagttctgggccctccagaacccaacaaatctcctacc
tcacctatttctaagacttttgatcaagtaagaataccacacagtccttctgtgttgaag
tcccctggtggtaacacaattgccagaagaaactacaaaggagagactctgctccatgtc
gcctccatcaagggtgacttagtaactgttgaacagttgctgaaaaatggggcagacccc
aatgtcaaagataatgctggctggacaccactgcatgaggcatgtaatcatgggcacaca
gaagtggtagagctgttgctacaacacaaggccttggtgaacactgcagggtatcagaac
gaatcaccgcttcatgatgctgccaagaatgggcatgtgagcattgctgagctgctgctt
ttgcatggtgcctcctgtgatgcagttaataaatttggtctgcggcctgtggactatgca
caaagtgaaaagatgaagtctgtgctaatgttagcagagaagaatgaatcattttcactt
aaacaaccctctgatgaggtaagttcactgagccccagccagccaagagatggaccagtc
ggtatactggggagcagtcttagtttgaagcaacagaaattgctgaacaaacttgccaca
gttctgaaggctcaaaagcatactgaatttaacagcagagtaactcatcttattatccct
gatgttccaatgccaagtactgtcaaatgcatgatggctgttcttactggatgttgggtc
ctcaagtttgaatgggtacaagcctgcctccaaaccacagtgcgagaacaagaggagaag
tacgaaatccaaggtggcccacaaagaggccggctcaacagagagcagctgctgccaaag
ttgtttgatggatgctacttctattttttgggatctttcagccatcaccagaagagtgat
cttgtggagctggtcaaagcagcaggaggacaaattctggttaggcagccaaaaccagac
agtgatgtgacacaaacaatcaacacggtggcttaccatgcagaatctacttctgaccag
agattttgcactcagtatgtcatctatgatgtggcttctaaattcaagccagagaaaatt
cgtcaaggcaaagtctggatggccccctccagctggcttatagactgtgtgatgtcattt
cagctcctgcctgtaaaatga
DBGET
integrated database retrieval system
