Dryobates pubescens (Downy woodpecker): 104300634
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Entry
104300634 CDS
T08526
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104300634 (TRPC1)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104300634 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
104300634
NCBI-ProteinID:
XP_009899241
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENRS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPLLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttgtatcagagtgcggacccgtccgcttcggcctctcccaacaagctgtta
gcgttgaaggatgtgcggcaggttaaggaggagaccaccctggacgagaaactcttcttg
ctggcctgcgacaaaggtgactactacatggttaagaaactcttagaggaaaacagatca
ggtgaaatgaacataaattgcgtggatgtgcttggacgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactgcagcttctcttggattatggctgccagtcatcggat
gcacttttggtggctattgactctgaagtggtgggagcggttgacattctacttaatcac
cgaccaaaaagatcctccagaccaaccattgtaaaactaatggaacgcattcagaaccca
gagtactccacaaccatggatgtggcacctgtcattttagctgctcatcggaacaactac
gaaattctcaccatgctgctgaagcaagatatatccttgcccaagcctcatgctgtaggc
tgtgaatgcacactgtgtactgcaaagaacaaaaaagatagcctgcgacattccaggttt
cgtcttgacatttatcggtgtttggccagtcctgctttaatcatgttgacagaggaggat
ccaatcttacgagcttttgaacttagtgcagacttgaaagaattaagccttgttgaggtt
gaattcagaaacgactatgaggagctagctcaacagtgcaaaacctttgctaaagatttg
cttgcacaagcacggaattcacgggagctggaggttattctgaatcacacatctagcgat
gaacacgtagacaagcgaggactgttggaagagaggatgaacttgagtcgattaaaactt
gccatcaagtataatcaaaaagagtttgttgctcagtctaactgccagcagttcctaaac
actgtgtggtttggacagatggcaggctatcgacgcaagcacacgtgcaagaaaattttg
actgttttgatggttggcattttctggccgcttctgtctctgtgttacttgttagctcct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacatttttgttgttacttaatttgtattcccttgtctacaatgagaacaag
aagaatacaatgggaccagcccttgagaggatagactatcttctgataatatggctaatt
ggaatggtgtggtcagatgttaaaagactgtggtatgatggtttagaagactttttagaa
gaatctcgtaatcagcttagttttgtcatgaattccctctatctggcaacttttgctcta
aaagtagttgcccacaacaagtttcatgattatgctgaaaggaaggactgggatgcattc
catcccaccctagtggcagaaggtctttttgcttttgctaatgtccttagttatctgcgt
ctcttcttcatgtacacaaccagctctattctgggaccactccagatttcaatgggacag
atgctacaagattttggaaaatttctgggcatgtttctccttgtcttgttctcattcaca
attggattgacacaactttatgacaaaggatttactgtcaatgaagaaaaagactgtgcg
ggtattttctgtgagcagcagagcaatgacacattccattcgtttattggcacatgtttt
gctctgttctggtacatattctccctggcacacgtagcaatctttgtcacgcgctttagc
tacggagaagagttgcagtcttttgtgggtgctgttattgttggtacctacaacgtggtg
gttgtgatagtattaactaaactccttgtggcaatgcttcataaaagttttcagctgata
gcgaatcatgaagataaggaatggaagtttgctcgtgccaagctttggcttagctacttt
gatgacaaatgcacgctacctccacctttcaatgttattccctcccccaagactatctgt
tatcttttcaacagtctcagtaaatggatctgctctcatacatcaagtggcaaagtgaaa
cgtcagaacagcctaaaggaatggagaaacctgaagcaaaagagggatgagaactaccaa
aaggtgatgtgctgcttagtccaccgttacttgacttccatgagacagaagatgcaaagc
acggatcaggccactgtggaaaacctgaatgagctgcggcaagacttgtccaagttccgg
aatgaaatgagagacctgcttggctttcgaacttctaagtatgccatgttttatccaaga
aactaa
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