Dryobates pubescens (Downy woodpecker): 104300643
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Entry
104300643 CDS
T08526
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104300643 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104300643 (TRIP12)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104300643 (TRIP12)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
HECT type E3
104300643 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104300643
NCBI-ProteinID:
XP_009899253
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRACSSSAVSIPEQEDPERVSTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKSKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSSSVVESTGTEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSAVASASSAVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKETS
KTGGSSKFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSES
PPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAAR
TDEAPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQL
FHRTIGSGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALI
TLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTAL
EMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPL
LTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSG
MFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYE
LTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQI
NEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVY
SSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMA
EILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGMLGTTTTISTGTAT
AAGNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDN
QAKSPTATQSPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNR
EKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRS
IVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGR
LEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQL
KCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEI
DESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGR
AGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSV
LNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINS
KLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLL
DTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGT
GLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAK
PAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVA
KSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKK
GGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLL
CGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPV
GGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQ
QSFHLS
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagagcctgtagttcgtct
gctgtttcaataccagaacaagaagatccagagagagtcagtacttcagagaagcaaaaa
acggggcaagtgcctaagaaagacaattcccgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaatctaaaagaagacacttagaccaagaa
cagccgaagtctacacagttgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
agttcagtagttgaatcaactggcactgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacatcttcctcatcttctgctgttgcctctgcttcttctgctgttgcctctgct
tcttctgctgttcctcagggtgccagagtgaaacagggaaaggaccagaataaggctaga
cgttcccgttctgcatccagccccagtccaaggaggagtagcagggacaaagaaacaagt
aaaacaggtggctcttcgaagtttgactgggctgctcgattcagcccaaaagtcagtctc
cctaaaacaaaactgtctctgccaggctcctccaaatcggagacatcaaaacctggacct
tcaggattacaggctaagctagcaagtctaagaaaatcaacaaagaagcgcagtgaatca
cctcctgctgagctccccagtttgcggcggagcacacggcaaaagaccacgggctcctgt
gctagcaccagtcggcgaggctctggcctgggcaaaagaggagcagctgaagctcgccga
caggagaagatggctgatcctgacaacaaccaggatggagttaactcctcagctgcacgt
acagatgaggctccccaaggagctgcagcttctagttctgttgctggggctgtaggtatg
accacctctggagaaagtgagtcagatgactctgagatgggaagactacaagctctatta
gaggctaggggtcttcctcctcacctgtttggccctcttggtcctcggatgtcgcagctc
ttccacaggacaattggaagtggagctagttctaaagcccaacagctgttacaaggtctc
caagccactgatgaaagtcagcaactgcaggcagtgatagagatgtgccagctgttggtt
atgggaaatgaagaaacattaggaggatttccagtcaagagtgttgtaccagctttgata
acgttgctgcagatggagcacaactttgacattatgaaccatgcgtgtcgagctttaaca
tatatgatggaagcacttcccagatcatctgctgtagtggtagatgcaattcctgtcttc
ttggaaaagctgcaagttattcagtgcattgatgtggcagagcaggcgcttacagccctg
gaaatgttatcacgcaggcatagtaaagccattctgcaagcgggtgggttggcagactgc
ttgctgtatctggaattcttcagtataaatgcacagaggaatgcactagctattgcggcc
aactgctgccagagtataacacctgatgagtttcactttgtggcagactctttgccactg
cttacacaaaggttgacccatcaggacaaaaagtctgttgaaagcacttgtctctgtttt
gcacggctagtagacaacttccagcatgaggagaacttgcttcagcaggtcgcttctaag
gacttgttaacaaatatccagcaacttttggtagtgacgcctcctatcctgagctcagga
atgttcatcatggtggtgcgcatgttttccttaatgtgctccaattgccctactcttgca
gtccaactaatgaagcaaaacattgcagaaacacttcatttcctcctttgtggagcctca
aatgggagttgtcaggaacaaattgacctcgttccacggagtcctcaagaactttatgag
cttacttctcttatctgtgaactgatgccttgcctgccaaaagaaggaatctttgctgtt
gatactatgctgaagaaaggaaatgcacaaaacacggatggtgcaatatggcagtggcga
gatgacaggggtctctggcatccctataacaggattgacagtcgaataatagagcaaatc
aatgaggatactggaacagcacgtgccattcagcgaaaaccaaaccctctagccaataca
aatactagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaagag
gacccagaactggcaaaatcatttatcaaaacattgtttggtgttctttatgaagtatat
agttcttcagctggacctgcagttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaagatgtactgaaaaaccatgctgtttcaagtcat
attgcttccatgctgtcgagtcaagaccttaagatagtagttggagccctgcaaatggca
gagattttaatgcaaaaattgcctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaagaacttagcagagtctgaggctttgctgacgagcccaccaaaagta
tgcactaatggatcaggaatgcttggtaccactacaactataagtactgggacagccact
gctgctggcaacgcagctgcggatttgggctctcccagcttgcagcacagccgggaggat
tctttggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgcca
aaacgagggccaaggagaccaaagtactctcctccaagagatgatgacaaagtagacaat
caagctaaaagccctacagctactcagtctcctaaatcttctttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataacattgaaccagcacga
actgcaggagtaagtggtcttgcaagggctgcttccaaggataccatttccaataacaga
gaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacgttattttagt
tctgaaaacatggatggaagcaatccagcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgcagc
attgtctcggagtctgacgtctcgtcatttgaaatccagcatagtgggtttgttaaacaa
ctgctactttacttgacatctaaaagtgagaaagatgctgtaagcagggatatcagattg
aagagatttcttcatgtatttttttcttctccacttcctggagaagaaccacttggaaga
ttagagccattagaaaatgcacctttgttggcattagtccataaaatgaacaattgcctc
agtcaaatggaacagtttcctgtcaaagtgcatgacttccctagtggaaatggaacaggg
agcagtttttctcttaacagaggatcccaagcattaaaattcttcaatacacatcagttg
aaatgccagctgcaaagacacccagactgcgctaatgtgaagcagtggaaaggtggtcct
gtgaagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggc
tatggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagactacaattt
tacattggagatcacttgctgccatacaatatgactgtgtatcaagcagttaggcagtac
agtttgcaagctgaggaggagagggaatctacagatgatgaaagcaacccactaggaaga
gctgggatttggacaaaaacacataccatttggtacaaacctgtgagagaggatgaagat
ggcaataaggactgtgttggtggtaaaagaggaagagcacaaactgctcctacaaaaaca
tctcctagaaattctaaaaagcatgatgaattgtggcatgacggtgtatgcccttcggtg
ttaaatcctctagaagtttacctcatctctactccacctgaaaacataacatttgaagat
ccttcattagatgttattcttcttctgagggttttacatgctatcagtcgatactggtat
tacttgtatgataatgcaatctgcaaggagataattccaacctcggaatttatcaacagt
aaattgacagcaaaagcaaacaggcagcttcaggatcctttggtgattatgacaggaaac
ataccaacttggttgacagaacttggaaaaacatgcccatttttctttccgtttgatacc
cgtcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactg
gatactaatccagaaatcaatcagtcagattctcaggatagcagagtggcaccacgactg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggcctaggccccacactagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggagaggagaagaagtgactttagccaatccaaaaggaagccaggaaggt
accaagtacatccataaccttcaaggcctttttgcacttccttttggtagaacagccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttctggggaaactaatggccaag
gcaatcatggattttagactggtggaccttcctcttgggcttcctttttataaatggatg
ctacgacaggaaacttccttgacatcacatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggacaaa
acacagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctca
gtggaagatctagggctggacttcacactgcctggttttcctaatatagaactgaaaaaa
gggggaaaagatacaccagtcaccatccacaacttagaggagtacctcagattggttatt
ttctgggcactgaatgaaggtgttgccagacagtttgactcattcagagatggatttgaa
tcagtgttccccctcagtcatcttcagtacttctatcctgaggagttggagcagctcttg
tgtggcagtaaaacagacacttgggatgcaaagactttaatggagtgttgcaggccagat
cacggttatacacatgacagtcgagcggtgaagtatctgtttgagatcctcagtagcttt
gatagtgagcagcaaagactgtttcttcagtttgtgacaggtagccccagactgcctgta
ggaggctttcgaagtttgaatcctccgctgacaattgtacgcaagacatttgagtctaca
gagaacccagacgatttcttaccctcagtcatgacttgtgtgaactatctcaaactgccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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