Dryobates pubescens (Downy woodpecker): 104300989
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Entry
104300989 CDS
T08526
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104300989 (TRPA1)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104300989 (TRPA1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
SchA_CurD
Motif
Other DBs
NCBI-GeneID:
104300989
NCBI-ProteinID:
XP_009899625
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MGFETLLTQLFGEHHKVRISKVAKNSAEQVISDGSACRLRSFIKKNRSGLTKVDELNATP
LHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVSLLLSRGANPNI
LNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYKDNPEALTLLIE
NGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFTNNGKCSPLHLA
VQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSYAGEESIIDAVD
GNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASWKIVNLLLSKGA
NVSLKDHLGRNFLHLTVLQPGGLQHLNEKFLQMEHIKNLVVDEDNEGCTPLHYACRQGVA
LSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLLNEGDKKGMTPL
HLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILDTNVKCTDRVDE
EGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDVVSTVILHKRWE
EAVVAFSHSSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFYIEYNFRYLQCP
LTLNKKLKDGEEIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAYGFRAHLMNLGI
YSLGLIPLTLLVTHIQPGRPLNGTELYEARPLEYENSYFTRVCMCLVLIMSLLGICKEIF
QLFQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAVYLSWMNFLLYL
QRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYSTPLLSVMKTFA
MMLGDINYHDAFLDPLLSNELPYPFLSYTVLIVFTLLIPILLMNLLIGLAVGDIAEVQKY
AALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVFQYCFGCEDSTT
DAQGTDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAEDEDSNDLFQHKF
RKRQLEHKNSKWDTVLKAVKTNVPNPGTEKNNSFF
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaaactctcttaacacaactgtttggagaacatcacaaagtaagaatcagc
aaggttgcaaagaacagtgccgagcaagtgatttcagatggaagtgcctgtaggctacgg
agcttcattaagaagaatcgttctgggcttaccaaagtggatgaattaaatgccaccccc
ctgcatcatgctgcagaaggaggtcaaatagaattaatgcagttgatcatagatgattct
tcctgtgaagtgttgaatgtgatggattcttctggaaataccccactgcactgggccaca
aagaaaaaccaggttgaaagtgtcagtctgcttctcagcagaggagccaacccaaacatt
ctcaactccaatatgatggcacctttgcatatggctgtgcagtccctgcataatgaaatc
gttaagattttagtccagcacagcagtacagatgttaatttggaaggtgaagcagggaac
acacctataattgtagcatgttacaaggataatcctgaagctctgacactactgatagaa
aatggagggaaaatctgtaaaccaaacaaaacaggatgtatgcctatccatgcagctgca
ttttcaggtgcgaaaacatgtatggaaattcttttaaaaaaaggtgaagaactgggtcac
tctgctaaaactcacatcaattttaccaataatggcaagtgcagtccacttcatttggcg
gttcagagtggggaccttgaaatgattaaaatgtgcattgaatttggagctcagatcgat
ctaaaacagaatgaaaaatgcacagcacttcattttgctgccactcaaggagcaactgag
attgtaaagttaatgatgtcatcctatgctggtgaggaatccattattgatgctgttgat
gggaataaggaaacattgcttcacaggacagcattgtttgatcattatgaactggcagag
tatttgatttcaatgggagctaatattgatagtgttgacatagaaggtcgatccccactt
ctgttggccacttcctgtgcatcatggaaaattgtgaatttactgctctcaaaaggagca
aatgtatcattaaaggatcatcttggtcggaatttcttgcatttgacagtattgcagcct
ggaggattgcagcatctgaatgagaaatttctgcagatggaacatatcaaaaaccttgta
gtggatgaagataatgaaggatgcaccccactgcattatgcatgcagacaaggtgtggct
ctctctgtaaataatttactcagcctcaacgtgtccatctactctaagagcagggacaag
aagtcaccattacactttgctgccagctatgggcgcatcaatacctgtcaacgactcata
agagatatgaaagacacaagacttctgaatgaaggggataaaaagggaatgactcccctt
catctggcagctcagaatggtcatgagaaggtagtgcagttccttctgaagagaggggcc
ctttttctctgtgattataaaggttggacagccctgcaccacgctgccttcggaggatac
actcgcacaatgcagatcattttggacaccaatgtgaagtgtactgacagagtggatgaa
gaagggaacacagctttgcacctggctgcaagagaaggacatgcaaaagctgtaaggtta
cttcttgactatggtgcaaaaattctgttcaacaaagcggtagcttctttcttccatgaa
gcaatacacaataggagaaaagatgttgtatctactgtcatcttgcataaaagatgggaa
gaagctgttgtggcattctctcactcttctagtgccaacaagtgtcctttgctggaaatg
gttgagtatcttcctgattcatttaaactggttttggacaactgcataattgaatcttca
gaggaaaagacaagtcgagacttctatattgaatacaacttcagatatcttcagtgtccc
ctgacacttaacaagaagctaaaggatggtgaagaaattttctatgagccacttaccacc
ttgaatgccatggtacgccacaaccgcatggagctactcagtcatcctgtgtgcaaagaa
tatttgcttatgaaatggatggcctatgggtttcgagcacatctaatgaatttaggcata
tattctctcggtctcatcccactgactcttctggtcactcacatacagccaggaagacct
ctgaatggaacagagctctatgaagcaaggccattagaatatgagaactcatacttcaca
agggtgtgtatgtgtttagttttaattatgagtttactgggaatctgcaaagagatattt
cagctgtttcagcagaaattgaagtatttgttggattactccaatcttctggactggaca
atttatactacaagcataatttttgtgtcttctttgtttattaatacaccagctcattta
cagtgggaatgtggagcaattgctgtgtacttgtcctggatgaacttcttgctttacctc
caacgatttgaaaactatggcatctacgttgtgatgttctgggaaattttgaggactttg
attcggattgctgttgtgttttttttcctgatcctggcttttggacttagtttctttgtc
cttttgggttcacagcaaacatacagcactcctctgctttctgtgatgaagacatttgcc
atgatgctgggagacataaattaccatgacgcattcctcgacccattgctgagcaatgaa
ttgccatatccattcctgagttacacagttctcatcgtatttaccctgcttatcccaatc
cttcttatgaacttgctaattggtttggctgttggggacatagctgaagtacagaaatat
gctgcgctcaaaagaattgcgatgcaggttaatcttcacaccaatttagagaagaagcta
ccattttggtttttaagtcgggtggaccaggaatcaatcactgtgtatcccaacaggcca
agatactgtggatttatgagtgtgttccagtactgctttgggtgtgaggactccaccaca
gatgcacagggcactgacacaacgctagaactggaagttctgaagcagaaatacaggctc
aaagatatatcaaccctattggaaaagcaacatgacctcattaaactgattatccaaaag
atggagatagtgtcagaggccgaggatgaagacagcaatgatctatttcagcacaagttt
aggaaaaggcagctggagcacaaaaatagtaaatgggatacagtgttaaaagctgttaaa
acaaatgttcctaacccaggcacagaaaagaacaatagcttcttctag
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integrated database retrieval system
