Dryobates pubescens (Downy woodpecker): 104301196
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Entry
104301196 CDS
T08526
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104301196 (AFF2)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104301196 (AFF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
104301196
NCBI-ProteinID:
XP_009899854
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MADDMQIAVEAVSARHWVLADELKSHIWPWLTDPEGVDWLAAPCVSGGSHYEQDRSALKR
KEWERRNQEVQQDEDLFASGFNLFGEPYKTNKGDALANRVQNTLGNYDEMKDLLTNHSNQ
SHLVGIPKNSVPQTPIDKNEQNFFPEPRNRMIPSHQISGHSSASMPPPSSLSSNSTLLHS
HQSSRKSRTDWSRGGHNSSGAQPSQSSSQQSRTKHSSSHDQPQGRYEDLYNCQSEQHKTG
GTEEANSMAASSHSRRHTHSKSAPGEHTYKENSHSKSPTELEFVGHGSGSPLPSTSLLSA
NNGLSTQNFPPGLHCKNSMVQQKPTAYVRPMDGQDQVPNDSPELKPPIEIENGYGNQPFG
TLLEGKANAPSSKNKVPKLNIPPVSEVTLPNDSSCVEEILREMTHSWPPPLTAIHTPGKA
EQTKFSIPSKVQDSQHLTSGYNVQKWSDPAGKVATKSVPQKSMLEDDLKLSSDEDDNEQA
AEKTKLRNIPVNSLPVPAAHSTGLAHSSGGSGSSSESESSSESDSDSESSSSDSECNEES
RSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINNQNEPHSETSSQAQSNQQAEGPNKGKL
NSSLPPADSKDRAILSPIREKAKPRVAQKTPEAKSSKQKSPAHNEPTSQRTTGKKQPKKV
ERTSSVEEYNWPKPNNTSNTPKEKETQEPPEQPKVRTKAAVGKTAPRKEPRTSTGLTSEK
KKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQAKILPACPGSGNGVKVKDAGSNILS
VSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNELLSPLREYEELKSLWVKIDLSLLSRI
PGQEPFETTSVKSEPRETNVKHRRPSRESPTPAAEKPPTKSKRKHKQTESLDTFVESKKQ
RLEDPSASCLLPPCISPIPNHRLTSTKESNGNSVKKVAKKKEEKLFPPPLSPLLDEPVHR
RHSVENSSFSQETSITSTSQTSSSSSSVSKHRKNENKSSSNPKGICEEESHNTPTANTLL
DTSHLETDIWSAMPMLSNGNSEPRRPKITFDDVLHNADYYMQEAKKLKHKADALLEKFGK
AVNYADAALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTGSSATEGDKKL
AVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKNSSKASQAPSPWGGNGK
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatatgcaaatagctgtagaggctgttagtgccaggcactgggttcttgct
gatgagctgaaaagccacatttggccctggctgactgatcctgagggtgttgactggctg
gctgctccttgtgtgtctggaggaagtcactatgaacaagaccggagtgcacttaagcgg
aaagaatgggagagaagaaaccaagaagtccagcaagatgaggatctctttgcttcaggc
tttaacctctttggtgaaccctacaagacaaataaaggcgatgcccttgcaaaccgtgtc
cagaacacactgggaaattatgatgaaatgaaggacctgttaaccaaccattccaaccag
agccaccttgtaggaatcccaaagaattctgttccacagacacccattgacaaaaatgaa
cagaactttttcccggaaccaagaaacaggatgatcccatctcatcaaatcagtggccac
tcatcagcatcgatgcctccaccttcttcattgtcatctaattctactttgctgcacagt
caccagagcagccggaagtcgaggacagactggtcacgtggtggtcacaactctagtggg
gctcagccaagccaatccagtagtcagcaaagtcggacaaagcatagctcttctcacgac
cagccacagggcagatatgaagacctctataattgtcagagtgagcagcataaaactgga
ggaactgaggaagcaaattcaatggcagcatcttcacattcaaggaggcatactcattca
aagtcagcgcctggagaacatacttacaaagagaacagtcactcaaagtcacccacagag
cttgaatttgtaggtcatggttctggatctccacttccttccacttctttgttatcggca
aacaatggtctttcgacccagaacttcccaccaggactgcactgtaaaaacagtatggtc
cagcaaaagcctacagcgtatgtcaggcctatggacggtcaggaccaggtaccaaatgac
tcaccagaactgaaacctccgatagagattgagaatggatatggaaatcagcccttcggt
acgctgctggaaggaaaagcgaatgcacctagttcgaagaacaaagtaccaaagctcaac
attcctcctgttagtgaagttacccttcccaatgactccagctgtgtggaagaaatatta
cgggagatgacccattcctggccgcctcctcttactgctattcacactccaggcaaggct
gagcagaccaagttttctatcccaagcaaggtacaagactcccaacatctgacctcagga
tacaatgtacaaaagtggagtgatccagcaggaaaagttgcaactaagtcagtgccacaa
aagtcaatgcttgaggatgatctgaaactcagcagtgatgaagatgacaatgaacaggct
gctgaaaagacgaaattgagaaacattcctgtaaacagcctgccagtgccagcggcacac
tcaactggcttggcccattccagtggcggctccggcagctccagcgagtccgagagcagc
tctgagtccgactccgacagcgagagcagctccagtgacagcgagtgcaacgaggagtca
cgcagtgccacaccggagcctgaacctccctctacaaacaagtggcagctggataaatgg
ctaaataaagtgaacccccataacaagaccatcatcaacaatcaaaatgagcctcacagc
gagaccagctcccaggcccagagcaaccagcaggccgaagggccaaacaaggggaagctc
aacagcagcctgcccccagccgattccaaagaccgggcaatccttagtcccatccgagag
aaagccaaaccacgggttgcccagaaaaccccagaggcaaaaagctccaagcagaagtca
ccagctcataatgagccaacttcacaaaggactactgggaaaaagcaacccaaaaaggta
gaaaggacttccagtgtagaagagtataactggcccaaaccaaataataccagcaacact
cccaaagaaaaagaaacacaggaaccccccgagcagccaaaggttcgaactaaagcagca
gttgggaagactgctccaaggaaagaaccacgaactagcacaggtctcacttcagagaag
aagaagtacagaggccccagcaaaattgtccctaagtcccgggaattcattgaaacagat
tcatctacttctgactcaaatacagaccaggaggagagcttgcaggctaagatattgcca
gcttgccctgggtctggcaatggcgtcaaagtgaaggacgctggcagtaacatcctcagc
gtaagtagtttaactagcaatggcagcaacacatccattgaccagaccagcaacgacttg
gaggaacagctcttttctcctatcccaatcgtacaaaatgaacttctgtccccactgaga
gaatatgaagaactcaaatctctgtgggtgaaaatagaccttagtttactctctaggata
cctggacaagagccttttgagaccacatctgtgaaaagtgaaccaagagagacaaatgtg
aaacacaggcgaccatctcgagagtcccctaccccagcagctgaaaaaccacccacaaaa
tccaaaaggaaacacaagcagacagaaagcctggatacctttgttgaaagcaagaagcag
cgcctggaggatccttcagcttcatgcctgcttccaccttgtatctctccaatcccgaat
cacagattgaccagcactaaagagagcaatggtaactcagtgaagaaggtggcaaagaaa
aaagaagagaagctgttccctcctcccttatcccccctcttggatgagcctgtgcaccgg
cggcacagtgttgaaaacagctccttcagccaagagaccagtatcacaagcacctctcag
accagcagttcttcctcctctgtttctaaacacagaaagaatgaaaataagtcctcttct
aaccccaaaggaatctgtgaggaagaatctcacaatacaccaacagccaacacccttctt
gacaccagccatctagaaacagacatctggtctgcaatgccaatgctttctaatgggaat
tctgagcccagaagacccaaaataacatttgacgatgtgcttcacaatgcggattattac
atgcaagaggctaagaagctaaagcataaagctgatgcattgctggagaagttcggcaaa
gcagtgaattatgctgatgctgccctctccttcatcgagtgcgggaacgctatggagcga
gatccattagaagctaaatctccatacaccatgtactcagagactgtggaactcatcagg
tatgcaatgagacttaagaatttcacaggctcttctgccacggaaggagacaagaaatta
gcagttttatgctaccgatgcttatcacttctctacttgagaatgtttaaactaaagaag
gaccatgctatgaagtactccagatctctgatggaatattttaagaactcttcaaaagcc
tcacaggccccctcaccttggggcggcaatggaaagtga
DBGET
integrated database retrieval system