Dryobates pubescens (Downy woodpecker): 104301211
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Entry
104301211 CDS
T08526
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
dpub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104301211 (UPF3B)
03015 mRNA surveillance pathway
104301211 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104301211 (UPF3B)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104301211 (UPF3B)
mRNA cycle factors
P-body specific factors
104301211 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF6980
Motif
Other DBs
NCBI-GeneID:
104301211
NCBI-ProteinID:
XP_009899870
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
CRRLFSLAVSVLSFCSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYAAIVE
FAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDEKLTSTPETLLEEIEARNKEL
IAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEERRKWKEEERRKRKEAEKLKK
VDRCPEKERDRSKEEPKIKLLKKPEKDEKDLERKEKSKKLEKEALREEKNASSASAKRSD
GETKEEKAKKSEDECVKDYRDRDRDFERDREYERAQREKLRRQEEERRRQKERFEKEKVY
RRKEEEVKKERDLLREKGKKSDLTDFTSSMDKSEKVTKDDKKEDTIKRDRIRNKDRPAMQ
LYQPGARSRSRLCQYEDSAAKPIEQGADKKQESESSNVKEEE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
tgccgccgcctcttcagcctggctgtctctgtcttgtctttctgcagcttgtaccctcac
atgttctcgagagcctacatcaacttcaaaaaccaggaagacatagtcctcttcagggat
cgttttgacggctatgtttttgtcgaccacaaaggtcaggaatatgctgccatagttgag
tttgcacctttccagaaagctgcaaaaaagaagagtaagaaaaaggatgccaaaactgga
accattgaagatgatccagagtacaagaagtttttggaaagttacagtgcagatgatgaa
aaattaacctccactcctgaaacgttgctggaggaaatagaggcaagaaacaaagagcta
atagctaaaaagactactcctttattgaacttcttgaaaaataaacagagactgagagaa
gaaaaaagagaagagaggaggaggagagaattggaaaggaaaagacaaagagaagaagaa
agaagaaaatggaaggaggaggagaggaggaagagaaaggaagcagaaaaactgaagaaa
gtagacagatgcccagaaaaagaaagagacagatcaaaagaagaaccaaagattaagcta
cttaagaagcctgaaaaagatgaaaaagacttggagagaaaagaaaaatccaagaaactg
gaaaaagaggctctgagggaggaaaaaaatgcgagtagtgcatctgccaaacgatctgat
ggggagacaaaagaagagaaggcaaaaaaatcagaagatgagtgtgtaaaggactacagg
gaccgagatagagattttgaaagagacagagaatatgagagagcacagagggagaaactg
agacgccaagaagaggagcgtcggaggcagaaagagcgctttgagaaagagaaggtttat
agaagaaaagaagaagaggtgaaaaaggaaagagacttactcagagaaaagggaaagaaa
agtgatcttacagactttaccagcagcatggacaaatctgagaaagtaaccaaagacgat
aaaaaagaagatacaattaagagggatcgtatcagaaacaaggatcgcccagcaatgcag
ctgtaccagccgggagcgcgaagccgaagcagattgtgtcagtatgaagacagtgccgca
aagcccatagagcagggagcggataagaaacaagagagtgagagcagtaatgtgaaggaa
gaggagtga
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